Entry: PS00514

Forthcoming changes to the profile format
General information about the entry

Entry name [info] FIBRINOGEN_C_1
Accession [info] PS00514
Entry type [info] PATTERN
Date [info] DEC-1991 (CREATED); NOV-1995 (DATA UPDATE); MAR-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00445

Name and characterization of the entry

Description [info] Fibrinogen C-terminal domain signature.
Pattern [info]
W-W-[LIVMFYW]-x(2)-C-x(2)-[GSA]-x(2)-N-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_04 which contains 544'996 sequence entries.


Total number of hits 79 in 79 different sequences
Number of true positive hits 79 in 79 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 41
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 65.83 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Site [info] disulfide at position 5
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
79 sequences

ANGL1_BOVIN (Q1RMR1), ANGL1_HUMAN (O95841), ANGL1_MOUSE (Q640P2), 
ANGL2_HUMAN (Q9UKU9), ANGL2_MOUSE (Q9R045), ANGL4_BOVIN (Q2KJ51), 
ANGL4_HUMAN (Q9BY76), ANGL4_MOUSE (Q9Z1P8), ANGL4_PIG   (Q2TNK5), 
ANGL4_RAT   (Q6TMA8), ANGL5_HUMAN (Q86XS5), ANGL6_HUMAN (Q8NI99), 
ANGL6_MOUSE (Q8R0Z6), ANGP1_BOVIN (O18920), ANGP1_CANFA (Q60FC1), 
ANGP1_HUMAN (Q15389), ANGP1_MOUSE (O08538), ANGP1_PIG   (Q9BDY8), 
ANGP1_RAT   (O35460), ANGP2_BOVIN (O77802), ANGP2_CANFA (A0A8J8), 
ANGP2_HUMAN (O15123), ANGP2_MOUSE (O35608), ANGP2_PIG   (Q9BDY7), 
ANGP2_RAT   (O35462), ANGP4_BOVIN (Q24K15), ANGP4_HUMAN (Q9Y264), 
ANGP4_MOUSE (Q9WVH6), FBCD1_HUMAN (Q8N539), FBCD1_MACFA (Q95LU3), 
FBCD1_MOUSE (A2AV25), FBCD1_XENTR (Q0P4P2), FBCDA_XENLA (Q6AX44), 
FBCDB_XENLA (Q5XK91), FCN1_HUMAN  (O00602), FCN1_MOUSE  (O70165), 
FCN1_PIG    (Q29042), FCN1_RAT    (Q9WTS8), FCN2_BOVIN  (Q5I2E5), 
FCN2_HUMAN  (Q15485), FCN2_MOUSE  (O70497), FCN2_PIG    (Q29041), 
FCN2_RAT    (P57756), FCN3_HUMAN  (O75636), FCNV1_CERRY (D8VNS7), 
FCNV2_CERRY (D8VNS8), FCNV3_CERRY (D8VNS9), FCNV4_CERRY (D8VNT0), 
FGL1_BOVIN  (Q3SZZ7), FGL1_HUMAN  (Q08830), FGL1_MOUSE  (Q71KU9), 
FGL1_RAT    (Q5M8C6), FGL2_BOVIN  (Q29RY7), FGL2_HUMAN  (Q14314), 
FGL2_MOUSE  (P12804), FIBA2_PETMA (P33573), FIBA_CHICK  (P14448), 
FIBA_HUMAN  (P02671), FIBA_PARPA  (P19477), FIBA_RAT    (P06399), 
FIBB_BOVIN  (P02676), FIBB_CHICK  (Q02020), FIBB_HUMAN  (P02675), 
FIBB_MOUSE  (Q8K0E8), FIBB_PETMA  (P02678), FIBB_RAT    (P14480), 
FIBG_BOVIN  (P12799), FIBG_HUMAN  (P02679), FIBG_MOUSE  (Q8VCM7), 
FIBG_PETMA  (P04115), FIBG_RAT    (P02680), FIBG_XENLA  (P17634), 
SCA_DROME   (P21520), TENN_HUMAN  (Q9UQP3), TENN_MOUSE  (Q80Z71), 
TENX_HUMAN  (P22105), TL5A_TACTR  (Q9U8W8), TL5B_TACTR  (Q9U8W7), 
TLLP_PHONI  (P85031)
» More

UniProtKB/Swiss-Prot
False negative sequences
41 sequences

ANGL3_HUMAN (Q9Y5C1), ANGL3_MOUSE (Q9R182), ANGL7_BOVIN (Q5EA66), 
ANGL7_HUMAN (O43827), ANGL7_MOUSE (Q8R1Q3), CNT3B_HUMAN (Q96NU0), 
CNTP1_HUMAN (P78357), CNTP1_MOUSE (O54991), CNTP1_RAT   (P97846), 
CNTP2_HUMAN (Q9UHC6), CNTP2_MOUSE (Q9CPW0), CNTP2_PONAB (Q5RD64), 
CNTP3_HUMAN (Q9BZ76), CNTP4_HUMAN (Q9C0A0), CNTP4_MOUSE (Q99P47), 
CNTP5_CANFA (Q0V8T0), CNTP5_CHICK (Q0V8S9), CNTP5_HUMAN (Q8WYK1), 
CTP5A_MOUSE (Q0V8T9), CTP5A_RAT   (Q0V8T6), CTP5B_MOUSE (Q0V8T8), 
CTP5B_RAT   (Q0V8T5), CTP5C_MOUSE (Q0V8T7), CTP5C_RAT   (Q0V8T4), 
CTP5D_RAT   (Q0V8T3), INTLP_ALLMI (P86928), ITL1A_MOUSE (O88310), 
ITL1B_MOUSE (Q80ZA0), ITLN1_HUMAN (Q8WWA0), ITLN2_HUMAN (Q8WWU7), 
MFAP4_BOVIN (P55918), MFAP4_HUMAN (P55083), MFAP4_MOUSE (Q9D1H9), 
TENA_CHICK  (P10039), TENA_HUMAN  (P24821), TENA_MOUSE  (Q80YX1), 
TENA_PIG    (Q29116), TENR_CHICK  (Q00546), TENR_HUMAN  (Q92752), 
TENR_MOUSE  (Q8BYI9), TENR_RAT    (Q05546)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

FGL1_MESAU  (P86239), FIBB_RABIT  (P14478)

		
PDB
[Detailed view]
71 PDB

1DEQ; 1EI3; 1FIB; 1FIC; 1FID; 1FZA; 1FZB; 1FZC; 1FZD; 1FZE; 1FZF; 1FZG; 1JC9; 1LT9; 1LTJ; 1LWU; 1M1J; 1N73; 1N86; 1N8E; 1RE3; 1RE4; 1RF0; 1RF1; 1Z3S; 1Z3U; 2D39; 2FFD; 2FIB; 2GY7; 2H43; 2HLO; 2HOD; 2HPC; 2J0G; 2J0H; 2J0Y; 2J1G; 2J2P; 2J3F; 2J3G; 2J3O; 2J3U; 2J5Z; 2J60; 2J61; 2J64; 2JHH; 2JHI; 2JHK; 2JHL; 2JHM; 2OYH; 2OYI; 2Q9I; 2WNP; 2XNX; 2XNY; 2Z4E; 3BVH; 3E1I; 3FIB; 3GHG; 3H32; 3HUS; 4EPU; 4JYO; 4JZC; 4K0V; 4M7F; 4M7H
» More

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission