Entry: PS00536

General information about the entry
Entry name UBIQUITIN_ACTIVAT_1
Accession number PS00536
Entry type PATTERN
Date DEC-1991 (CREATED); DEC-2004 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00463
Name and characterization of the entry
DescriptionUbiquitin-activating enzyme signature 1.
Pattern K-[AI]-[CL]-S-G-K-[FI]-x-[PQ].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 15 hits in 15 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 15 hits in 15 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 14
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 2
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 51.72 %
Comments
  • Taxonomic range: Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
SAE2_HUMAN  (Q9UBT2), SAE2_MOUSE  (Q9Z1F9), UBA1Y_MOUSE (P31254), 
UBA1_BOVIN  (A3KMV5), UBA1_DICDI  (Q55C16), UBA1_HUMAN  (P22314), 
UBA1_MOUSE  (Q02053), UBA1_RABIT  (Q29504), UBA1_RAT    (Q5U300), 
UBA1_YEAST  (P22515), UBE11_ARATH (P93028), UBE11_WHEAT (P20973), 
UBE12_ARATH (P92974), UBE12_WHEAT (P31251), UBE13_WHEAT (P31252)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
SAE2A_XENLA (Q642Q1), SAE2B_XENLA (Q7ZY60), SAE2_DANRE  (Q7SXG4), 
SAE2_XENTR  (Q28GH3), UBA1_SCHPO  (O94609), UBA3_DICDI  (Q54QG9), 
UBA3_HUMAN  (Q8TBC4), UBA3_MOUSE  (Q8C878), UBA3_RAT    (Q99MI7), 
UBA3_SCHPO  (Q09765), UBA3_YEAST  (Q99344), UBA6_HUMAN  (A0AVT1), 
UBA6_MOUSE  (Q8C7R4), UBA7_HUMAN  (P41226)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
UBA1_CANAW  (P52495), UBE1Y_MACRU (P31255)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1Y8Q; 1Y8R; 3CMM; 3KYC; 3KYD;

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