Entry: PS00551

General information about the entry
Entry name MOLYBDOPTERIN_PROK_1
Accession number PS00551
Entry type PATTERN
Date DEC-1991 (CREATED); NOV-1997 (DATA UPDATE); APR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00392
Name and characterization of the entry
DescriptionProkaryotic molybdopterin oxidoreductases signature 1.
Pattern [STAN]-x-[CH]-x(2,3)-C-[STAG]-[GSTVMF]-x-C-x-[LIVMFYW]-x-[LIVMA]-x(3,4)- [DENQKHT].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_06, total number of sequence entries in that release: 540261.
  • Total number of hits in UniProtKB/Swiss-Prot: 178 hits in 178 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 165 hits in 165 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 13 hits in 13 different sequences
  • Number of known missed hits: 36
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 1
  • Precision (true hits / (true hits + false positives)): 92.70 %
  • Recall (true hits / (true hits + false negatives)): 82.09 %
Comments
  • Taxonomic range: Archaea, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
DMSA_ECOLI  (P18775), DMSA_HAEIN  (P45004), FDHA_DESGI  (Q934F5), 
FDHA_METFO  (P06131), FDHA_METJA  (P61159), FDHF_ECOLI  (P07658), 
FDHL_STAA3  (Q2FEI5), FDHL_STAA8  (Q2FVV9), FDHL_STAAB  (Q2YYT1), 
FDHL_STAAC  (Q5HDP9), FDHL_STAAM  (Q931G2), FDHL_STAAN  (Q99RW4), 
FDHL_STAAR  (Q6GEC4), FDHL_STAAS  (Q6G711), FDHL_STAAW  (Q7A057), 
FDHL_STAHJ  (Q4L8G8), FDHL_STAS1  (Q49ZN0), FDNG_ECOLI  (P24183), 
FDOG_ECOLI  (P32176), FDXG_HAEIN  (P46448), NAPA1_PHOPR (Q6LTV9), 
NAPA2_PHOPR (Q6LQJ3), NAPA_ACTP2  (A3N277), NAPA_ACTP7  (B3H2D1), 
NAPA_ACTPJ  (B0BR28), NAPA_ACTSZ  (A6VQY7), NAPA_AERHH  (A0KIM1), 
NAPA_AERS4  (A4SPG7), NAPA_AGGAC  (Q8VL02), NAPA_AGRT5  (Q8U7P1), 
NAPA_BORBR  (Q7WIQ1), NAPA_BORPA  (Q7W733), NAPA_BORPD  (A9I7M5), 
NAPA_BRAJA  (Q89EN5), NAPA_BRASB  (A5ED21), NAPA_BRASO  (A4Z0A1), 
NAPA_BURXL  (Q13I15), NAPA_CAMC1  (A7ZCK4), NAPA_CAMC5  (A7GZP5), 
NAPA_CAMFF  (A0RQ36), NAPA_CAMHC  (A7I3Y7), NAPA_CAMJ8  (A8FLJ3), 
NAPA_CAMJE  (Q9PPD9), NAPA_CAMJJ  (A1VZC8), NAPA_CAMJR  (Q5HV12), 
NAPA_CAMLR  (B9KCQ2), NAPA_CITK8  (A8AE11), NAPA_COLP3  (Q487G4), 
NAPA_CUPNH  (P39185), NAPA_CUPPJ  (Q46RX3), NAPA_CUPTR  (B3R8B4), 
NAPA_DECAR  (Q47A87), NAPA_DINSH  (A8LLY9), NAPA_ECO24  (A7ZP28), 
NAPA_ECO27  (B7UFL9), NAPA_ECO45  (B7MFB8), NAPA_ECO55  (B7LAM9), 
NAPA_ECO57  (Q8XE47), NAPA_ECO5E  (B5YWZ7), NAPA_ECO7I  (B7NN18), 
NAPA_ECO81  (B7MXN6), NAPA_ECO8A  (B7M5P6), NAPA_ECOBW  (C4ZU48), 
NAPA_ECODH  (B1X8A2), NAPA_ECOHS  (A8A268), NAPA_ECOK1  (A1AD59), 
NAPA_ECOL5  (Q0TFN6), NAPA_ECOL6  (Q8CVW4), NAPA_ECOLC  (B1IY66), 
NAPA_ECOLI  (P33937), NAPA_ECOLU  (B7N5G7), NAPA_ECOSE  (B6I1A4), 
NAPA_ECOSM  (B1LKV2), NAPA_ECOUT  (Q1R9L3), NAPA_EDWI9  (C5B7B9), 
NAPA_ERWCT  (Q6D5Z2), NAPA_ESCF3  (B7LJU7), NAPA_HAEDU  (Q7VPJ7), 
NAPA_HAEI8  (Q4QNJ6), NAPA_HAEPS  (B8F7K2), NAPA_HAES1  (Q0I5G9), 
NAPA_HAES2  (B0URQ3), NAPA_HAHCH  (Q2SGV7), NAPA_HELHP  (Q7VJT5), 
NAPA_LEPCP  (B1Y6A6), NAPA_MANSM  (Q65Q72), NAPA_METS4  (B0UCB6), 
NAPA_NAUPA  (B9L8L4), NAPA_NITSB  (A6Q604), NAPA_PARPN  (Q56350), 
NAPA_PASMU  (Q9CKL8), NAPA_PECCP  (C6DK59), NAPA_PSEA7  (A6V924), 
NAPA_PSEA8  (B7UX15), NAPA_PSEAB  (Q02IZ4), NAPA_PSEAE  (Q9I4G3), 
NAPA_PSEMY  (A4XWM0), NAPA_PSEST  (Q3HS05), NAPA_PSEU5  (A4VJ11), 
NAPA_PSYIN  (A1SWQ0), NAPA_RALPJ  (B2UBL7), NAPA_RHIME  (Q92Z36), 
NAPA_RHOPB  (Q21AR4), NAPA_RHOS4  (Q53176), NAPA_SACD2  (Q21PN1), 
NAPA_SALA4  (B5EYU5), NAPA_SALAR  (A9MJZ6), NAPA_SALCH  (Q57M92), 
NAPA_SALDC  (B5FNQ2), NAPA_SALEP  (B5R233), NAPA_SALG2  (B5RC85), 
NAPA_SALHS  (B4TAT3), NAPA_SALNS  (B4SYT3), NAPA_SALPA  (Q5PI61), 
NAPA_SALPB  (A9N5G2), NAPA_SALPC  (C0Q0P2), NAPA_SALPK  (B5BDZ4), 
NAPA_SALSV  (B4TPE6), NAPA_SALTI  (Q8Z570), NAPA_SALTY  (Q8ZNH6), 
NAPA_SERP5  (A8GHJ4), NAPA_SHEDO  (Q12P44), NAPA_SHEHH  (B0TSW5), 
NAPA_SHIB3  (B2TV30), NAPA_SHIBS  (Q31Z29), NAPA_SHIDS  (Q32I06), 
NAPA_SHIF8  (Q0T2R8), NAPA_SHIFL  (Q83QV0), NAPA_SHISS  (Q3Z001), 
NAPA_SYMTH  (Q67QZ1), NAPA_VIBC3  (A5EZX9), NAPA_VIBCH  (Q9KLR4), 
NAPA_VIBCM  (C3LVU3), NAPA_VIBF1  (Q5E3J6), NAPA_VIBFM  (B5FGW1), 
NAPA_VIBHB  (A7N7J3), NAPA_VIBPA  (Q87GW6), NAPA_VIBSL  (B7VRL0), 
NAPA_VIBVU  (Q8D623), NAPA_VIBVY  (Q7MD44), NAPA_WOLSU  (Q7M962), 
NAPA_YERE8  (A1JL26), NAPA_YERP3  (A7FG75), NAPA_YERPA  (Q1C5S8), 
NAPA_YERPB  (B2K970), NAPA_YERPE  (Q8ZCF3), NAPA_YERPG  (A9QZL3), 
NAPA_YERPN  (Q1CK03), NAPA_YERPP  (A4TMK8), NAPA_YERPS  (Q668I0), 
NAPA_YERPY  (B1JSJ0), NARB_SHEFN  (O33732), NARB_SYNE7  (P39458), 
NARB_SYNY3  (P73448), NARG_BACSU  (P42175), NARG_ECOLI  (P09152), 
NARG_MYCTU  (O06559), NARX_MYCTU  (P71994), NARZ_ECOLI  (P19319), 
NASA_KLEOX  (Q06457), NASC_BACSU  (P42434), PHSA_SALTY  (P37600), 
PSRA_WOLSU  (P31075), Y006_METJA  (Q60314), YNFF_ECOLI  (P77783)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
AHY_PELAE   (Q71EW5), BISC_ECOLI  (P20099), BISC_RHOSH  (P54934), 
CLRA_IDEDE  (P60068), DDHA_RHOSU  (Q8GPG4), DSTOR_RHOCA (Q52675), 
DSTOR_RHOSH (Q57366), FDHL_BACSU  (Q795Y4), NAPA_DESDA  (P81186), 
NAPA_HAEIE  (A5UAE1), NAPA_LARHH  (C1D9G3), NAPA_MAGMG  (Q93HX3), 
NAPA_MAGSA  (Q2W3T1), NAPA_SHEON  (Q8EIJ1), SERA_THASE  (Q9S1H0), 
TORA_ECO57  (P58360), TORA_ECOL6  (Q8CW73), TORA_ECOLI  (P33225), 
TORA_PASMU  (Q9CK41), TORA_SALTI  (Q8Z2M4), TORA_SALTY  (Q8ZKZ7), 
TORA_SHEMA  (O87948), TORA_SHEON  (Q8EHI9), TORA_VIBCH  (Q9KRF0), 
TORA_VIBPA  (Q87QI7), TORA_VIBVU  (Q8D8S3), TORA_VIBVY  (Q7MLQ2), 
TORZ_ECO57  (P58362), TORZ_ECOLI  (P46923), TORZ_HAEIN  (P44798), 
TTRA_ARCFU  (O30078), TTRA_SALTY  (Q9Z4S6), YJGC_BACSU  (O34720), 
YNFE_ECOLI  (P77374), YOAE_BACSU  (C0SP82), YYAE_BACSU  (P37519)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
NARG_BRASZ  (P85097)
False positive hits (sequences which do not belong to the set under consideration):
KR510_HUMAN (Q6L8G5), KR511_HUMAN (Q6L8G4), KRA51_HUMAN (Q6L8H4), 
KRA52_HUMAN (Q701N4), KRA54_HUMAN (Q6L8H1), KRA55_HUMAN (Q701N2), 
KRA56_HUMAN (Q6L8G9), KRA57_HUMAN (Q6L8G8), KRA58_HUMAN (O75690), 
KRUC_SHEEP  (P26372), NUOG2_RHIME (P56914), OR59A_DROME (P81923), 
POB3_ASHGO  (Q756X6)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]
1AA6; 1FDI; 1FDO; 1H0H; 1KQF; 1KQG; 1OGY; 1Q16; 1R27; 1Y4Z; 1Y5I; 1Y5L; 1Y5N; 2IV2; 2NYA; 3EGW; 3IR5; 3IR7; 3ML1; 3O5A;

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View entry in raw text format (no links)
Direct ScanProsite submission


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