Entry: PS00557

General information about the entry
Entry name FMN_HYDROXY_ACID_DH_1
Accession number PS00557
Entry type PATTERN
Date DEC-1991 (CREATED); DEC-1991 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00482
Associated ProRule PRU00683
Name and characterization of the entry
DescriptionFMN-dependent alpha-hydroxy acid dehydrogenases active site.
Pattern S-N-H-G-[AG]-R-Q.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 139 hits in 139 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 139 hits in 139 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 1
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 1
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 99.29 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 3,active_site
  • `Interesting' site in the pattern: 6,substrate_binding
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
CYB2_HANAN  (P09437), CYB2_YEAST  (P00175), GLO1_ARATH  (Q9LRR9), 
GLO1_ORYSI  (B8AKX6), GLO1_ORYSJ  (Q10CE4), GLO2_ARATH  (Q9LRS0), 
GLO2_ORYSI  (Q01KC2), GLO2_ORYSJ  (Q7XPR4), GLO3_ARATH  (Q24JJ8), 
GLO3_ORYSI  (B8AUI3), GLO3_ORYSJ  (Q7FAS1), GLO4_ARATH  (Q9LJH5), 
GLO4_ORYSI  (B8B8K5), GLO4_ORYSJ  (Q8H3I4), GLO5_ARATH  (O49506), 
GLO5_ORYSI  (B8B7C5), GLO5_ORYSJ  (Q6YT73), GOX_SPIOL   (P05414), 
HAOX1_HUMAN (Q9UJM8), HAOX1_MOUSE (Q9WU19), HAOX2_BOVIN (Q3ZBW2), 
HAOX2_HUMAN (Q9NYQ3), HAOX2_MOUSE (Q9NYQ2), HAOX2_RAT   (Q07523), 
HAOX_DICDI  (Q54E41), LA2M_MYCSM  (P21795), LLDD_ACIAD  (Q6FFS1), 
LLDD_ACIB3  (B7H2H0), LLDD_ACIB5  (B7IBS4), LLDD_ACIBC  (B2I061), 
LLDD_ACIBS  (B0VND0), LLDD_ACIBT  (A3M0X0), LLDD_ACIBY  (B0V6L1), 
LLDD_ACTP2  (A3N3E5), LLDD_ACTP7  (B3GZA5), LLDD_ACTPJ  (B0BTC7), 
LLDD_AGRVS  (B9K115), LLDD_ALCFA  (Q6WB83), LLDD_AZOC5  (A8HTC9), 
LLDD_BARHE  (Q6G4R2), LLDD_BARQU  (Q6G0J2), LLDD_BART1  (A9IN89), 
LLDD_CAUCN  (B8H3Q5), LLDD_CAUCR  (Q9A943), LLDD_CAUSK  (B0T7X2), 
LLDD_CHRSD  (Q1R0J2), LLDD_CITK8  (A8ARJ1), LLDD_CROS8  (A7MNF6), 
LLDD_ECO24  (A7ZTF9), LLDD_ECO27  (B7ULG1), LLDD_ECO45  (B7MFG9), 
LLDD_ECO55  (B7L725), LLDD_ECO57  (Q8XDF7), LLDD_ECO5E  (B5YWA7), 
LLDD_ECO7I  (B7NPB4), LLDD_ECO81  (B7N251), LLDD_ECO8A  (B7M492), 
LLDD_ECOBW  (C4ZXJ7), LLDD_ECODH  (B1X8M0), LLDD_ECOHS  (A8A670), 
LLDD_ECOK1  (A1AHE2), LLDD_ECOL5  (Q0TBK1), LLDD_ECOL6  (Q8FCB1), 
LLDD_ECOLC  (B1IZI5), LLDD_ECOLI  (P33232), LLDD_ECOLU  (B7NER0), 
LLDD_ECOSE  (B6I3I4), LLDD_ECOSM  (B1LK44), LLDD_ECOUT  (Q1R4Z0), 
LLDD_ENT38  (A4W540), LLDD_ERWCT  (Q6DAY3), LLDD_ESCF3  (B7LTL2), 
LLDD_HAEDU  (Q7VPI9), LLDD_HAEI8  (Q4QJK8), LLDD_HAEIE  (A5UBE3), 
LLDD_HAEIG  (A5UFG9), LLDD_HAEIN  (P46454), LLDD_KLEP3  (B5XMV0), 
LLDD_KLEP7  (A6TFK0), LLDD_MYCTU  (P95143), LLDD_PSEA7  (A6VCM8), 
LLDD_PSEA8  (B7V1I3), LLDD_PSEAB  (Q02FQ1), LLDD_PSEAE  (Q9HV37), 
LLDD_PSEE4  (Q1IF69), LLDD_PSEFS  (C3K053), LLDD_PSEMY  (A4XYG7), 
LLDD_PSEP1  (A5W9B2), LLDD_PSEPG  (B0KIT4), LLDD_PSEPK  (Q88DT3), 
LLDD_PSEPW  (B1J244), LLDD_PSEU2  (Q4ZY06), LLDD_SALA4  (B5EXA8), 
LLDD_SALAR  (A9MLC3), LLDD_SALCH  (Q57ID8), LLDD_SALDC  (B5FLH2), 
LLDD_SALEP  (B5R5C7), LLDD_SALG2  (B5RGI4), LLDD_SALHS  (B4T986), 
LLDD_SALNS  (B4SXA4), LLDD_SALPA  (Q5PLQ7), LLDD_SALPB  (A9MVJ5), 
LLDD_SALPC  (C0Q1T7), LLDD_SALPK  (B5BHX7), LLDD_SALSV  (B4TZU7), 
LLDD_SALTI  (Q8Z2E5), LLDD_SALTY  (Q8ZL61), LLDD_SERP5  (A8GIL1), 
LLDD_SHIB3  (B2U5C2), LLDD_SHIBS  (Q31V17), LLDD_SHIDS  (Q329P9), 
LLDD_SHIF8  (Q0SYD1), LLDD_SHIFL  (Q83PP7), LLDD_SHISS  (Q3YVX0), 
LLDD_STRM5  (B4SMK1), LLDD_STRMK  (B2FIJ0), LLDD_VIBCH  (Q9KKW6), 
LLDD_VIBCM  (C3LWP7), LLDD_VIBPA  (Q87G18), LLDD_XANAC  (Q8PR33), 
LLDD_XANC5  (Q3BZH2), LLDD_XANC8  (Q4V0H2), LLDD_XANCB  (B0RLM2), 
LLDD_XANCP  (Q8PE75), LLDD_XANOM  (Q2P9K0), LLDD_XANOP  (B2SUY3), 
LLDD_XANOR  (Q5H6Z4), LLDD_XANP2  (A7IMB0), LLDD_YERP3  (A7FJF0), 
LLDD_YERPA  (Q1C9P0), LLDD_YERPB  (B2JZQ1), LLDD_YERPE  (Q8ZFV8), 
LLDD_YERPG  (A9R623), LLDD_YERPN  (Q1CGZ1), LLDD_YERPP  (A4TKI4), 
LLDD_YERPS  (Q66C32), LLDD_YERPY  (B1JPU0), MDLB_PSEPU  (P20932), 
YKN3_SCHPO  (Q9HDX2)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
MFTD_MYCTU  (P95040)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
CYBL_RHOGR  (P32953)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1AL7; 1AL8; 1FCB; 1GOX; 1GYL; 1HUV; 1KBI; 1KBJ; 1LCO; 1LDC; 1LTD; 1P4C; 1P5B; 1QCW; 1SZE; 1SZF; 1SZG; 1TB3; 2A7N; 2A7P; 2A85; 2NZL; 2RDT; 2RDU; 2RDW; 2W0U; 3GIY; 3SGZ;

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