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Entry: PS00559

General information about the entry

Entry name [info] MOLYBDOPTERIN_EUK
Accession [info] PS00559
Entry type [info] PATTERN
Date [info] 01-DEC-1991 CREATED; 01-APR-2006 DATA UPDATE; 22-NOV-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00484

Name and characterization of the entry

Description [info] Eukaryotic molybdopterin oxidoreductases signature.
Pattern [info]
[GA]-{A}-x(2)-[KRNQHT]-x(11,14)-[LIVMFYWS]-x(3)-{V}-{GK}-x(3)-[LIVMF]-x-
C-x(2)-[DEN]-R-x(2)-[DE].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_11 which contains 556'196 sequence entries.


Total number of hits 60 in 60 different sequences
Number of true positive hits 53 in 53 different sequences
Number of 'unknown' hits 0
Number of false positive hits 7 in 7 different sequences
Number of false negative sequences 21
Number of 'partial' sequences 4
Precision (true positives / (true positives + false positives)) 88.33 %
Recall (true positives / (true positives + false negatives)) 71.62 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
53 sequences

AOXA_BOVIN  (P48034    ), AOXA_CAVPO  (H9TB17    ), AOXA_HUMAN  (Q06278    ), 
AOXA_MACFA  (Q5FB27    ), AOXA_MOUSE  (O54754    ), AOXA_RABIT  (P80456    ), 
AOXA_RAT    (Q9Z0U5    ), NIA1_ARATH  (P11832    ), NIA1_BRANA  (P39867    ), 
NIA1_HORVU  (P27967    ), NIA1_ORYSJ  (P16081    ), NIA1_PHAVU  (P39865    ), 
NIA1_SOYBN  (P54233    ), NIA1_TOBAC  (P11605    ), NIA2_ARATH  (P11035    ), 
NIA2_BRANA  (P39868    ), NIA2_HORVU  (P27969    ), NIA2_PHAVU  (P39866    ), 
NIA2_SOYBN  (P39870    ), NIA2_TOBAC  (P08509    ), NIA3_MAIZE  (P49102    ), 
NIA7_HORVU  (P27968    ), NIA_ASPNG   (P36858    ), NIA_BEABA   (P43100    ), 
NIA_BETPN   (P27783    ), NIA_CICIN   (P43101    ), NIA_CUCMA   (P17569    ), 
NIA_EMENI   (P22945    ), NIA_FUSOX   (P39863    ), NIA_LEPMC   (P36842    ), 
NIA_LOTJA   (P39869    ), NIA_NEUCR   (P08619    ), NIA_PETHY   (P36859    ), 
NIA_PICAN   (P49050    ), NIA_SOLLC   (P17570    ), NIA_SPIOL   (P23312    ), 
NIA_USTMA   (Q05531    ), NIA_VOLCA   (P36841    ), SUOX_CHICK  (P07850    ), 
SUOX_HUMAN  (P51687    ), SUOX_MACFA  (Q60HD0    ), SUOX_MOUSE  (Q8R086    ), 
SUOX_RAT    (Q07116    ), XDH_BOVIN   (P80457    ), XDH_CALVI   (P08793    ), 
XDH_CHICK   (P47990    ), XDH_DROME   (P10351    ), XDH_DROPS   (P22811    ), 
XDH_DROSU   (P91711    ), XDH_FELCA   (Q9MYW6    ), XDH_HUMAN   (P47989    ), 
XDH_MOUSE   (Q00519    ), XDH_RAT     (P22985    )
» more

UniProtKB/Swiss-Prot
False negative sequences
21 sequences

ALDO1_ARATH (Q7G193    ), ALDO2_ARATH (Q7G192    ), ALDO3_ARATH (Q7G9P4    ), 
ALDO4_ARATH (Q7G191    ), AOXB_CAVPO  (H9TB19    ), AOXB_MACFA  (C4NYZ3    ), 
AOXB_MOUSE  (Q5SGK3    ), AOXB_RAT    (Q5QE78    ), AOXC_MOUSE  (G3X982    ), 
AOXC_RAT    (Q5QE80    ), AOXD_CAVPO  (H9TB18    ), AOXD_MOUSE  (Q3TYQ9    ), 
AOXD_RAT    (Q5QE79    ), NIA_PHYIN   (P39864    ), SUOX_ARATH  (Q9S850    ), 
SUOX_DROME  (Q9VWP4    ), XDH1_ARATH  (Q8GUQ8    ), XDH2_ARATH  (F4JLI5    ), 
XDH_DICDI   (Q54FB7    ), XDH_EMENI   (Q12553    ), XDH_ORYSJ   (Q6AUV1    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences
4 sequences

NIA1_MAIZE  (P17571    ), NIA2_MAIZE  (P39871    ), NIA_CHLVU   (Q01170    ), 
NIA_LOTTE   (P39882    )
» more

UniProtKB/Swiss-Prot
False positive sequences
7 sequences

B2L14_RAT   (Q6AYK4    ), CAPSD_TOBSV (P03598    ), EPOR_CANLF  (Q2KL21    ), 
GREB1_MOUSE (Q3UHK3    ), LKHA4_ARATH (Q9FY49    ), PCM1_HUMAN  (Q15154    ), 
Y5900_ARATH (Q9FID8    )
» more

PDB
[Detailed view]
38 PDB

1FIQ; 1FO4; 1N5X; 1V97; 1VDV; 1WYG; 2A9D; 2BIH; 2BII; 2CKJ; 2E1Q; 2E3T; 3AM9; 3AMZ; 3AN1; 3AX7; 3AX9; 3B9J; 3BDJ; 3ETR; 3EUB; 3NRZ; 3NS1; 3NVV; 3NVW; 3NVY; 3NVZ; 3SR6; 3UNA; 3UNC; 3UNI; 4UHW; 4UHX; 4YRW; 4YSW; 4YTY; 4YTZ; 5EPG
» more

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