Entry: PS00559

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General information about the entry

Entry name [info] MOLYBDOPTERIN_EUK
Accession [info] PS00559
Entry type [info] PATTERN
Date [info] DEC-1991 (CREATED); APR-2006 (DATA UPDATE); JUL-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00484

Name and characterization of the entry

Description [info] Eukaryotic molybdopterin oxidoreductases signature.
Pattern [info]
[GA]-{A}-x(2)-[KRNQHT]-x(11,14)-[LIVMFYWS]-x(3)-{V}-{GK}-x(3)-[LIVMF]-x-
C-x(2)-[DEN]-R-x(2)-[DE].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_09 which contains 546'439 sequence entries.


Total number of hits 60 in 60 different sequences
Number of true positive hits 53 in 53 different sequences
Number of 'unknown' hits
Number of false positive hits 7 in 7 different sequences
Number of false negative sequences 21
Number of 'partial' sequences 4
Precision (true positives / (true positives + false positives)) 88.33 %
Recall (true positives / (true positives + false negatives)) 71.62 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
53 sequences

AOXA_BOVIN  (P48034), AOXA_CAVPO  (H9TB17), AOXA_HUMAN  (Q06278), 
AOXA_MACFA  (Q5FB27), AOXA_MOUSE  (O54754), AOXA_RABIT  (P80456), 
AOXA_RAT    (Q9Z0U5), NIA1_ARATH  (P11832), NIA1_BRANA  (P39867), 
NIA1_HORVU  (P27967), NIA1_ORYSJ  (P16081), NIA1_PHAVU  (P39865), 
NIA1_SOYBN  (P54233), NIA1_TOBAC  (P11605), NIA2_ARATH  (P11035), 
NIA2_BRANA  (P39868), NIA2_HORVU  (P27969), NIA2_PHAVU  (P39866), 
NIA2_SOYBN  (P39870), NIA2_TOBAC  (P08509), NIA3_MAIZE  (P49102), 
NIA7_HORVU  (P27968), NIA_ASPNG   (P36858), NIA_BEABA   (P43100), 
NIA_BETPN   (P27783), NIA_CICIN   (P43101), NIA_CUCMA   (P17569), 
NIA_EMENI   (P22945), NIA_FUSOX   (P39863), NIA_LEPMC   (P36842), 
NIA_LOTJA   (P39869), NIA_NEUCR   (P08619), NIA_PETHY   (P36859), 
NIA_PICAN   (P49050), NIA_SOLLC   (P17570), NIA_SPIOL   (P23312), 
NIA_USTMA   (Q05531), NIA_VOLCA   (P36841), SUOX_CHICK  (P07850), 
SUOX_HUMAN  (P51687), SUOX_MACFA  (Q60HD0), SUOX_MOUSE  (Q8R086), 
SUOX_RAT    (Q07116), XDH_BOVIN   (P80457), XDH_CALVI   (P08793), 
XDH_CHICK   (P47990), XDH_DROME   (P10351), XDH_DROPS   (P22811), 
XDH_DROSU   (P91711), XDH_FELCA   (Q9MYW6), XDH_HUMAN   (P47989), 
XDH_MOUSE   (Q00519), XDH_RAT     (P22985)
» More

UniProtKB/Swiss-Prot
False negative sequences
21 sequences

ALDO1_ARATH (Q7G193), ALDO2_ARATH (Q7G192), ALDO3_ARATH (Q7G9P4), 
ALDO4_ARATH (Q7G191), AOXB_CAVPO  (H9TB19), AOXB_MACFA  (C4NYZ3), 
AOXB_MOUSE  (Q5SGK3), AOXB_RAT    (Q5QE78), AOXC_MOUSE  (G3X982), 
AOXC_RAT    (Q5QE80), AOXD_CAVPO  (H9TB18), AOXD_MOUSE  (Q3TYQ9), 
AOXD_RAT    (Q5QE79), NIA_PHYIN   (P39864), SUOX_ARATH  (Q9S850), 
SUOX_DROME  (Q9VWP4), XDH1_ARATH  (Q8GUQ8), XDH2_ARATH  (F4JLI5), 
XDH_DICDI   (Q54FB7), XDH_EMENI   (Q12553), XDH_ORYSJ   (Q6AUV1)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
4 sequences

NIA1_MAIZE  (P17571), NIA2_MAIZE  (P39871), NIA_CHLVU   (Q01170), 
NIA_LOTTE   (P39882)
» More

UniProtKB/Swiss-Prot
False positive sequences
7 sequences

B2L14_RAT   (Q6AYK4), CAPSD_TOBSV (P03598), EPOR_CANFA  (Q2KL21), 
GREB1_MOUSE (Q3UHK3), LKHA4_ARATH (Q9FY49), PCM1_HUMAN  (Q15154), 
Y5900_ARATH (Q9FID8)
» More

PDB
[Detailed view]
31 PDB

1FIQ; 1FO4; 1N5X; 1V97; 1VDV; 1WYG; 2A9D; 2BIH; 2BII; 2CKJ; 2E1Q; 2E3T; 3AM9; 3AMZ; 3AN1; 3AX7; 3AX9; 3B9J; 3BDJ; 3ETR; 3EUB; 3NRZ; 3NS1; 3NVV; 3NVW; 3NVY; 3NVZ; 3SR6; 3UNA; 3UNC; 3UNI
» More

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