Entry: PS00559

General information about the entry

Entry name [info] MOLYBDOPTERIN_EUK
Accession [info] PS00559
Entry type [info] PATTERN
Date [info] DEC-1991 (CREATED); APR-2006 (DATA UPDATE); MAY-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00484

Name and characterization of the entry

Description [info] Eukaryotic molybdopterin oxidoreductases signature.
Pattern [info]
[GA]-{A}-x(2)-[KRNQHT]-x(11,14)-[LIVMFYWS]-x(3)-{V}-{GK}-x(3)-[LIVMF]-x-
C-x(2)-[DEN]-R-x(2)-[DE].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_07 which contains 548'872 sequence entries.


Total number of hits 60 in 60 different sequences
Number of true positive hits 53 in 53 different sequences
Number of 'unknown' hits 0
Number of false positive hits 7 in 7 different sequences
Number of false negative sequences 21
Number of 'partial' sequences 4
Precision (true positives / (true positives + false positives)) 88.33 %
Recall (true positives / (true positives + false negatives)) 71.62 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
53 sequences

AOXA_BOVIN  (P48034), AOXA_CAVPO  (H9TB17), AOXA_HUMAN  (Q06278), 
AOXA_MACFA  (Q5FB27), AOXA_MOUSE  (O54754), AOXA_RABIT  (P80456), 
AOXA_RAT    (Q9Z0U5), NIA1_ARATH  (P11832), NIA1_BRANA  (P39867), 
NIA1_HORVU  (P27967), NIA1_ORYSJ  (P16081), NIA1_PHAVU  (P39865), 
NIA1_SOYBN  (P54233), NIA1_TOBAC  (P11605), NIA2_ARATH  (P11035), 
NIA2_BRANA  (P39868), NIA2_HORVU  (P27969), NIA2_PHAVU  (P39866), 
NIA2_SOYBN  (P39870), NIA2_TOBAC  (P08509), NIA3_MAIZE  (P49102), 
NIA7_HORVU  (P27968), NIA_ASPNG   (P36858), NIA_BEABA   (P43100), 
NIA_BETPN   (P27783), NIA_CICIN   (P43101), NIA_CUCMA   (P17569), 
NIA_EMENI   (P22945), NIA_FUSOX   (P39863), NIA_LEPMC   (P36842), 
NIA_LOTJA   (P39869), NIA_NEUCR   (P08619), NIA_PETHY   (P36859), 
NIA_PICAN   (P49050), NIA_SOLLC   (P17570), NIA_SPIOL   (P23312), 
NIA_USTMA   (Q05531), NIA_VOLCA   (P36841), SUOX_CHICK  (P07850), 
SUOX_HUMAN  (P51687), SUOX_MACFA  (Q60HD0), SUOX_MOUSE  (Q8R086), 
SUOX_RAT    (Q07116), XDH_BOVIN   (P80457), XDH_CALVI   (P08793), 
XDH_CHICK   (P47990), XDH_DROME   (P10351), XDH_DROPS   (P22811), 
XDH_DROSU   (P91711), XDH_FELCA   (Q9MYW6), XDH_HUMAN   (P47989), 
XDH_MOUSE   (Q00519), XDH_RAT     (P22985)
» More

UniProtKB/Swiss-Prot
False negative sequences
21 sequences

ALDO1_ARATH (Q7G193), ALDO2_ARATH (Q7G192), ALDO3_ARATH (Q7G9P4), 
ALDO4_ARATH (Q7G191), AOXB_CAVPO  (H9TB19), AOXB_MACFA  (C4NYZ3), 
AOXB_MOUSE  (Q5SGK3), AOXB_RAT    (Q5QE78), AOXC_MOUSE  (G3X982), 
AOXC_RAT    (Q5QE80), AOXD_CAVPO  (H9TB18), AOXD_MOUSE  (Q3TYQ9), 
AOXD_RAT    (Q5QE79), NIA_PHYIN   (P39864), SUOX_ARATH  (Q9S850), 
SUOX_DROME  (Q9VWP4), XDH1_ARATH  (Q8GUQ8), XDH2_ARATH  (F4JLI5), 
XDH_DICDI   (Q54FB7), XDH_EMENI   (Q12553), XDH_ORYSJ   (Q6AUV1)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
4 sequences

NIA1_MAIZE  (P17571), NIA2_MAIZE  (P39871), NIA_CHLVU   (Q01170), 
NIA_LOTTE   (P39882)
» More

UniProtKB/Swiss-Prot
False positive sequences
7 sequences

B2L14_RAT   (Q6AYK4), CAPSD_TOBSV (P03598), EPOR_CANFA  (Q2KL21), 
GREB1_MOUSE (Q3UHK3), LKHA4_ARATH (Q9FY49), PCM1_HUMAN  (Q15154), 
Y5900_ARATH (Q9FID8)
» More

PDB
[Detailed view]
35 PDB

1FIQ; 1FO4; 1N5X; 1V97; 1VDV; 1WYG; 2A9D; 2BIH; 2BII; 2CKJ; 2E1Q; 2E3T; 3AM9; 3AMZ; 3AN1; 3AX7; 3AX9; 3B9J; 3BDJ; 3ETR; 3EUB; 3NRZ; 3NS1; 3NVV; 3NVW; 3NVY; 3NVZ; 3SR6; 3UNA; 3UNC; 3UNI; 4YRW; 4YSW; 4YTY; 4YTZ
» More

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