Entry: PS00561

General information about the entry

Entry name [info] CBM2_A
Accession [info] PS00561
Entry type [info] PATTERN
Date [info] 01-DEC-1991 CREATED; 01-NOV-1997 DATA UPDATE; 05-JUL-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00485

Name and characterization of the entry

Description [info] CBM2a (carbohydrate-binding type-2) domain signature.
Pattern [info] 
W-N-[STAGR]-[STDN]-[LIVM]-x(2)-[GST]-x-[GST]-x(2)-[LIVMFT]-[GA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_07 which contains 555'100 sequence entries.


Total number of hits 19 in 19 different sequences
Number of true positive hits 18 in 18 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 94.74 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 18 sequences 

CHIT_STRLI  (P36909    ), CHIT_STRPL  (P11220    ), GUN1_BUTFI  (P20847    ), 

GUN2_THEFU  (P26222    ), GUN4_THEFU  (P26221    ), GUNA_CELFI  (P07984    ), 
GUNA_CELJU  (P10476    ), GUNA_STRLI  (P27035    ), GUNA_THEBI  (P26414    ), 
GUNB_CELFI  (P26225    ), GUNB_CELJU  (P18126    ), GUNC_CELJU  (P27033    ), 
GUXA_CELFA  (P50401    ), GUXB_CELFA  (P50899    ), GUX_CELFI   (P07986    ), 
XYNA_CELJU  (P14768    ), XYNB_CELJU  (P23030    ), XYNC_CELJU  (P23031    )
» more

UniProtKB/Swiss-Prot
False positive sequences		 1 sequence 

BGLM_EMENI  (Q5AWD4    )


				
	

	

		PDB
[Detailed view]		
		
			2 PDB
			


			1EXG; 1EXH
				
	





View entry in original PROSITE format


View entry in raw text format (no links)


Direct ScanProsite submission