Entry: PS00561

General information about the entry
Entry name CBM2_A
Accession number PS00561
Entry type PATTERN
Date DEC-1991 (CREATED); NOV-1997 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00485
Name and characterization of the entry
DescriptionCBM2a (carbohydrate-binding type-2) domain signature.
Pattern W-N-[STAGR]-[STDN]-[LIVM]-x(2)-[GST]-x-[GST]-x(2)-[LIVMFT]-[GA].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 19 hits in 19 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 18 hits in 18 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 1 hits in 1 different sequences
  • Number of known missed hits: 0
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 94.74 %
  • Recall (true hits / (true hits + false negatives)): 100.00 %
Comments
  • Taxonomic range: Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
CHIT_STRLI  (P36909), CHIT_STRPL  (P11220), GUN1_BUTFI  (P20847), 
GUN2_THEFU  (P26222), GUN4_THEFU  (P26221), GUNA_CELFI  (P07984), 
GUNA_CELJU  (P10476), GUNA_STRLI  (P27035), GUNA_THEBI  (P26414), 
GUNB_CELFI  (P26225), GUNB_CELJU  (P18126), GUNC_CELJU  (P27033), 
GUXA_CELFA  (P50401), GUXB_CELFA  (P50899), GUX_CELFI   (P07986), 
XYNA_CELJU  (P14768), XYNB_CELJU  (P23030), XYNC_CELJU  (P23031)
False positive hits (sequences which do not belong to the set under consideration):
BGLM_EMENI  (Q5AWD4)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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PDB
[Detailed view]		 1EXG; 1EXH;

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