Entry: PS00562

General information about the entry

Entry name [info] CBM1_1
Accession [info] PS00562
Entry type [info] PATTERN
Date [info] DEC-1991 (CREATED); APR-2006 (DATA UPDATE); JUN-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00486

Name and characterization of the entry

Description [info] CBM1 (carbohydrate binding type-1) domain signature.
Pattern [info]
C-G-G-x(4,7)-G-x(3)-C-x(4,5)-C-x(3,5)-[NHGS]-x-[FYWMI]-x(2)-Q-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_08 which contains 320'201 sequence entries.


Total number of hits 90 in 86 different sequences
Number of true positive hits 90 in 86 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 98.90 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 4
Site [info] disulfide at position 1
Site [info] disulfide at position 7
Site [info] disulfide at position 9
Site [info] disulfide at position 16
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
86 sequences

AXE1_ASPFU  (Q4WBW4), AXE1_HYPJE  (Q99034), AXE1_NEOFI  (A1DBP9), 
AXE1_PENPU  (Q8NJP6), CBHB_ASPAC  (O59843), CBHB_ASPCL  (A1CU44), 
CBHB_ASPFC  (B0Y8K2), CBHB_ASPFU  (Q4WM08), CBHB_ASPNC  (A2QAI7), 
CBHB_ASPNG  (Q9UVS8), CBHB_ASPTN  (Q0CMT2), CBHB_EMENI  (Q8NK02), 
CBHB_NEOFI  (A1DNL0), CBHC_ASPCL  (A1CCN4), CBHC_ASPFC  (B0XWL3), 
CBHC_ASPFU  (Q4WFK4), CBHC_ASPNC  (A2QYR9), CBHC_ASPTN  (Q0CFP1), 
CBHC_EMENI  (Q5B2E8), CBHC_NEOFI  (A1DJQ7), CE12C_MAGO7 (G4NBX2), 
CEL1_AGABI  (Q00023), CEL61_THIHA (G2Q9T3), CEL6A_MAGO7 (G4MM92), 
CEL6A_PODAN (B2ABX7), CEL7A_THIHA (G2QCS4), CIP2_HYPJQ  (G0RV93), 
EGLD_ASPCL  (A1C4H2), EGLD_ASPFC  (B0Y9G4), EGLD_ASPFN  (B8MXJ7), 
EGLD_ASPFU  (Q4WBU0), EGLD_ASPKW  (Q96WQ9), EGLD_ASPNC  (A2R5N0), 
EGLD_ASPOR  (Q2US83), EGLD_ASPTN  (Q0CEU4), EGLD_EMENI  (Q5BCX8), 
EGLD_NEOFI  (A1DBS6), FAEB_PENFN  (Q9HE18), GH6D_PODAN  (B2ADA5), 
GUN1_HYPJE  (P07981), GUN1_TRILO  (Q12714), GUN2_HYPJE  (P07982), 
GUN3_HUMIN  (Q12624), GUN3_NEUCR  (Q7SDR1), GUN4_HYPJE  (O14405), 
GUN5_HYPJE  (P43317), GUNB_FUSOX  (P46236), GUNF_FUSOX  (P46239), 
GUNK_FUSOX  (P45699), GUX1A_NEUCR (Q7SA23), GUX1B_NEUCR (P38676), 
GUX1_HUMGT  (P15828), GUX1_HYPJE  (P62694), GUX1_HYPRU  (P19355), 
GUX1_PENJA  (Q06886), GUX1_PHACH  (P13860), GUX1_TRIHA  (Q9P8P3), 
GUX1_TRIKO  (P62695), GUX2_AGABI  (Q92400), GUX2_HYPJE  (P07987), 
GUX3_AGABI  (P49075), GUX6_HUMIN  (Q9C1S9), GUXC_FUSOX  (P46238), 
MANF_ASPFC  (B0Y9E7), MANF_ASPFN  (B8NIV9), MANF_ASPFU  (Q4WBS1), 
MANF_ASPOR  (Q2U2I3), MANF_EMENI  (Q5AR04), MANF_NEOFI  (A1DBV1), 
PSBP_PORPU  (P50272), XG74_HYPJQ  (Q7Z9M8), XYN1_HUMGT  (P79046), 
XYN6_MAGGR  (Q8NJ73), XYN6_MAGO7  (G4MPQ7), XYNA_PENFN  (Q8WZJ4), 
XYNA_PHACH  (Q9HEZ1), XYNB_NEOPA  (Q02290), XYNB_PENFN  (Q8J0K5), 
XYNB_PENOX  (E7EF85), XYNB_PHACH  (B7SIW1), XYNC_NEOPA  (Q9UV68), 
XYNC_PHACH  (B7SIW2), XYND_GIBZE  (I1S3C6), XYND_PENFN  (Q5ZNB1), 
XYS20_NEOPA (A8TGA1), YKK5_SCHPO  (Q9P7F1)
» More

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

MANF_ASPCL  (A1C8U0)

		
PDB
[Detailed view]
6 PDB

1AZ6; 1AZH; 1AZK; 1CBH; 2CBH; 4BMF

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