Entry: PS00562

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General information about the entry

Entry name [info] CBM1_1
Accession [info] PS00562
Entry type [info] PATTERN
Date [info] DEC-1991 (CREATED); APR-2006 (DATA UPDATE); JUL-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00486

Name and characterization of the entry

Description [info] CBM1 (carbohydrate binding type-1) domain signature.
Pattern [info]
C-G-G-x(4,7)-G-x(3)-C-x(4,5)-C-x(3,5)-[NHGS]-x-[FYWMI]-x(2)-Q-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_09 which contains 546'439 sequence entries.


Total number of hits 84 in 80 different sequences
Number of true positive hits 84 in 80 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 98.82 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 4
Site [info] disulfide at position 1
Site [info] disulfide at position 7
Site [info] disulfide at position 9
Site [info] disulfide at position 16
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
80 sequences

AXE1_ASPFU  (Q4WBW4), AXE1_HYPJE  (Q99034), AXE1_NEOFI  (A1DBP9), 
AXE1_PENPU  (Q8NJP6), CBHB_ASPAC  (O59843), CBHB_ASPCL  (A1CU44), 
CBHB_ASPFC  (B0Y8K2), CBHB_ASPFU  (Q4WM08), CBHB_ASPNC  (A2QAI7), 
CBHB_ASPNG  (Q9UVS8), CBHB_ASPTN  (Q0CMT2), CBHB_EMENI  (Q8NK02), 
CBHB_NEOFI  (A1DNL0), CBHC_ASPCL  (A1CCN4), CBHC_ASPFC  (B0XWL3), 
CBHC_ASPFU  (Q4WFK4), CBHC_ASPNC  (A2QYR9), CBHC_ASPTN  (Q0CFP1), 
CBHC_EMENI  (Q5B2E8), CBHC_NEOFI  (A1DJQ7), CEL1_AGABI  (Q00023), 
CEL61_THIHA (G2Q9T3), CIP2_HYPJQ  (G0RV93), EGLD_ASPCL  (A1C4H2), 
EGLD_ASPFC  (B0Y9G4), EGLD_ASPFN  (B8MXJ7), EGLD_ASPFU  (Q4WBU0), 
EGLD_ASPKW  (Q96WQ9), EGLD_ASPNC  (A2R5N0), EGLD_ASPOR  (Q2US83), 
EGLD_ASPTN  (Q0CEU4), EGLD_EMENI  (Q5BCX8), EGLD_NEOFI  (A1DBS6), 
FAEB_PENFN  (Q9HE18), GUN1_HYPJE  (P07981), GUN1_TRILO  (Q12714), 
GUN2_HYPJE  (P07982), GUN3_HUMIN  (Q12624), GUN4_HYPJE  (O14405), 
GUN5_HYPJE  (P43317), GUNB_FUSOX  (P46236), GUNF_FUSOX  (P46239), 
GUNK_FUSOX  (P45699), GUX1A_NEUCR (Q7SA23), GUX1B_NEUCR (P38676), 
GUX1_HUMGT  (P15828), GUX1_HYPJE  (P62694), GUX1_HYPRU  (P19355), 
GUX1_PENJA  (Q06886), GUX1_PHACH  (P13860), GUX1_TRIHA  (Q9P8P3), 
GUX1_TRIKO  (P62695), GUX2_AGABI  (Q92400), GUX2_HYPJE  (P07987), 
GUX3_AGABI  (P49075), GUX6_HUMIN  (Q9C1S9), GUXC_FUSOX  (P46238), 
MANF_ASPFC  (B0Y9E7), MANF_ASPFN  (B8NIV9), MANF_ASPFU  (Q4WBS1), 
MANF_ASPOR  (Q2U2I3), MANF_EMENI  (Q5AR04), MANF_NEOFI  (A1DBV1), 
PSBP_PORPU  (P50272), XG74_HYPJQ  (Q7Z9M8), XYN1_HUMGT  (P79046), 
XYN6_MAGGR  (Q8NJ73), XYN6_MAGO7  (G4MPQ7), XYNA_PENFN  (Q8WZJ4), 
XYNA_PHACH  (Q9HEZ1), XYNB_NEOPA  (Q02290), XYNB_PENFN  (Q8J0K5), 
XYNB_PENOX  (E7EF85), XYNB_PHACH  (B7SIW1), XYNC_NEOPA  (Q9UV68), 
XYNC_PHACH  (B7SIW2), XYND_GIBZE  (I1S3C6), XYND_PENFN  (Q5ZNB1), 
XYS20_NEOPA (A8TGA1), YKK5_SCHPO  (Q9P7F1)
» More

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

MANF_ASPCL  (A1C8U0)

		
PDB
[Detailed view]
6 PDB

1AZ6; 1AZH; 1AZK; 1CBH; 2CBH; 4BMF

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