Entry: PS00562

General information about the entry

Entry name [info] CBM1_1
Accession [info] PS00562
Entry type [info] PATTERN
Date [info] DEC-1991 (CREATED); APR-2006 (DATA UPDATE); MAY-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00486

Name and characterization of the entry

Description [info] CBM1 (carbohydrate binding type-1) domain signature.
Pattern [info]
C-G-G-x(4,7)-G-x(3)-C-x(4,5)-C-x(3,5)-[NHGS]-x-[FYWMI]-x(2)-Q-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_06 which contains 551'385 sequence entries.


Total number of hits 95 in 91 different sequences
Number of true positive hits 95 in 91 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 98.96 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 4
Site [info] disulfide at position 1
Site [info] disulfide at position 7
Site [info] disulfide at position 9
Site [info] disulfide at position 16
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
91 sequences

AXE1_ASPFU  (Q4WBW4    ), AXE1_COPC7  (A8PB24    ), AXE1_HYPJE  (Q99034    ), 
AXE1_NEOFI  (A1DBP9    ), AXE1_TALPU  (Q8NJP6    ), CBHB_ASPAC  (O59843    ), 
CBHB_ASPCL  (A1CU44    ), CBHB_ASPFC  (B0Y8K2    ), CBHB_ASPFU  (Q4WM08    ), 
CBHB_ASPNC  (A2QAI7    ), CBHB_ASPNG  (Q9UVS8    ), CBHB_ASPTN  (Q0CMT2    ), 
CBHB_EMENI  (Q8NK02    ), CBHB_NEOFI  (A1DNL0    ), CBHC_ASPCL  (A1CCN4    ), 
CBHC_ASPFC  (B0XWL3    ), CBHC_ASPFU  (Q4WFK4    ), CBHC_ASPNC  (A2QYR9    ), 
CBHC_ASPTN  (Q0CFP1    ), CBHC_EMENI  (Q5B2E8    ), CBHC_NEOFI  (A1DJQ7    ), 
CE12C_MAGO7 (G4NBX2    ), CEL1_AGABI  (Q00023    ), CEL61_MYCTT (G2Q9T3    ), 
CEL6A_MAGO7 (G4MM92    ), CEL6A_PODAN (B2ABX7    ), CEL7A_MYCTT (G2QCS4    ), 
EGLD_ASPCL  (A1C4H2    ), EGLD_ASPFC  (B0Y9G4    ), EGLD_ASPFN  (B8MXJ7    ), 
EGLD_ASPFU  (Q4WBU0    ), EGLD_ASPKW  (Q96WQ9    ), EGLD_ASPNC  (A2R5N0    ), 
EGLD_ASPOR  (Q2US83    ), EGLD_ASPTN  (Q0CEU4    ), EGLD_EMENI  (Q5BCX8    ), 
EGLD_NEOFI  (A1DBS6    ), FAEB_TALFU  (Q9HE18    ), FAEB_TALSN  (B8M9H9    ), 
GCE1_PHACR  (P0CT87    ), GCE1_PODAN  (B2ABS0    ), GCE_CERUI   (A0A0A7EQR3), 
GCE_HYPJQ   (G0RV93    ), GH6D_PODAN  (B2ADA5    ), GUN1_HYPJE  (P07981    ), 
GUN1_TRILO  (Q12714    ), GUN2_HYPJE  (P07982    ), GUN3_HUMIN  (Q12624    ), 
GUN3_NEUCR  (Q7SDR1    ), GUN4_HYPJE  (O14405    ), GUN5_HYPJE  (P43317    ), 
GUNB_FUSOX  (P46236    ), GUNF_FUSOX  (P46239    ), GUNK_FUSOX  (P45699    ), 
GUX1A_NEUCR (Q7SA23    ), GUX1B_NEUCR (P38676    ), GUX1_HUMGT  (P15828    ), 
GUX1_HYPJE  (P62694    ), GUX1_HYPRU  (P19355    ), GUX1_PENJA  (Q06886    ), 
GUX1_PHACH  (P13860    ), GUX1_TRIHA  (Q9P8P3    ), GUX1_TRIKO  (P62695    ), 
GUX2_AGABI  (Q92400    ), GUX2_HYPJE  (P07987    ), GUX3_AGABI  (P49075    ), 
GUX6_HUMIN  (Q9C1S9    ), GUXC_FUSOX  (P46238    ), MANF_ASPFC  (B0Y9E7    ), 
MANF_ASPFN  (B8NIV9    ), MANF_ASPFU  (Q4WBS1    ), MANF_ASPOR  (Q2U2I3    ), 
MANF_EMENI  (Q5AR04    ), MANF_NEOFI  (A1DBV1    ), PSBP_PORPU  (P50272    ), 
XG74_HYPJQ  (Q7Z9M8    ), XYN1_HUMGT  (P79046    ), XYN6_MAGGR  (Q8NJ73    ), 
XYN6_MAGO7  (G4MPQ7    ), XYNA_PHACH  (Q9HEZ1    ), XYNA_TALFU  (Q8WZJ4    ), 
XYNB_NEOPA  (Q02290    ), XYNB_PENOX  (E7EF85    ), XYNB_PHACH  (B7SIW1    ), 
XYNB_TALFU  (Q8J0K5    ), XYNC_NEOPA  (Q9UV68    ), XYNC_PHACH  (B7SIW2    ), 
XYND_GIBZE  (I1S3C6    ), XYND_TALFU  (Q5ZNB1    ), XYS20_NEOPA (A8TGA1    ), 
YKK5_SCHPO  (Q9P7F1    )
» more

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

MANF_ASPCL  (A1C8U0    )

		
PDB
[Detailed view]
8 PDB

1AZ6; 1AZH; 1AZK; 1CBH; 2CBH; 2MWJ; 2MWK; 4BMF

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