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Entry: PS00573
General information about the entry
Entry namePYRIDINE_REDOX_2
Accession numberPS00573
Entry typePATTERN
DateDEC-1991 (CREATED); DEC-2004 (DATA UPDATE); DEC-2011 (INFO UPDATE).
PROSITE DocumentationPDOC00496
Name and characterization of the entry
DescriptionPyridine nucleotide-disulphide oxidoreductases class-II active site.
PatternC-x(2)-C-D-[GAS]-x(2,4)-[FYA]-x(4)-[LIVMAT]-x(0,1)-[LIVM](2)-[GI]-[GDS]- [GRD]-[DN].
Numerical results
  • UniProtKB/Swiss-Prot release number: 01, total number of sequence entries in that release: 534242.
  • Total number of hits in UniProtKB/Swiss-Prot: 82 hits in 82 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 82 hits in 82 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 0
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 2
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 100.00 %
Comments
  • Taxonomic range: Archaebacteria, Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-ProtTrue positive hits:
AHPF_ECOLI  (P35340), AHPF_PSEAE  (Q9I6Z2), AHPF_PSEPK  (P0A155), 
AHPF_PSEPU  (P0A156), AHPF_SALTY  (P19480), AHPF_STAA8  (O05204), 
AHPF_STAAC  (Q5HIR6), AHPF_STAAM  (P66012), AHPF_STAAN  (P99118), 
AHPF_STAAR  (Q6GJR8), AHPF_STAAS  (Q6GC92), AHPF_STAAW  (P66013), 
AHPF_STAEQ  (Q5HRY2), AHPF_STAES  (Q8CMQ1), AHPF_XANCH  (O06465), 
DHNA_BACSU  (P42974), DHNA_BACYN  (P26829), NTRA_ORYSJ  (Q69PS6), 
NTRB_ORYSJ  (Q6ZFU6), NTRC_ORYSJ  (Q70G58), R34K_CLOPA  (P23160), 
TRXB1_ARATH (Q39243), TRXB1_YEAST (P29509), TRXB2_ARATH (Q39242), 
TRXB2_YEAST (P38816), TRXB3_ARATH (O22229), TRXB_AQUAE  (O66790), 
TRXB_ASHGO  (Q75CM8), TRXB_BACSU  (P80880), TRXB_BORBU  (P94284), 
TRXB_BUCAI  (P57399), TRXB_BUCAP  (P81433), TRXB_BUCBP  (Q89AJ2), 
TRXB_CANGA  (Q6FR39), TRXB_CHLMU  (Q9PKT7), TRXB_CHLPN  (Q9Z8M4), 
TRXB_CHLTR  (O84101), TRXB_CLOLI  (P52213), TRXB_COXBU  (P39916), 
TRXB_DEBHA  (Q6BIS1), TRXB_DICDI  (Q54UU8), TRXB_ECO57  (P0A9P5), 
TRXB_ECOLI  (P0A9P4), TRXB_EUBAC  (P50971), TRXB_HAEIN  (P43788), 
TRXB_HELPJ  (Q9ZL18), TRXB_HELPY  (P56431), TRXB_KLULA  (Q6HA24), 
TRXB_LISIN  (Q928B5), TRXB_LISMO  (O32823), TRXB_METJA  (Q58931), 
TRXB_MYCGE  (P47348), TRXB_MYCLE  (P46843), TRXB_MYCPN  (P75531), 
TRXB_MYCPU  (Q98PK9), TRXB_MYCSM  (O30973), TRXB_MYCTU  (P52214), 
TRXB_NEUCR  (P51978), TRXB_PENCH  (P43496), TRXB_PNECA  (Q7Z7S3), 
TRXB_PNEJI  (Q8J0U0), TRXB_RICBR  (Q1RJD8), TRXB_RICCN  (Q92I02), 
TRXB_RICFE  (Q4ULP1), TRXB_RICPR  (Q9ZD97), TRXB_RICTY  (Q68WT3), 
TRXB_SCHPO  (Q92375), TRXB_SPIBA  (Q8T6Z1), TRXB_STAAC  (Q5HHQ4), 
TRXB_STAAM  (P66010), TRXB_STAAN  (P99101), TRXB_STAAR  (Q6GIM7), 
TRXB_STAAS  (Q6GB66), TRXB_STAAW  (P66011), TRXB_STAEQ  (Q5HQW4), 
TRXB_STAES  (Q8CPY8), TRXB_STRCL  (Q05741), TRXB_STRCO  (P52215), 
TRXB_TREPA  (O83790), TRXB_UREPA  (Q9PR71), TRXB_VIBCH  (Q9KSS4), 
TRXB_YARLI  (Q6C7L4)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
AHPF_ACICA  (P82955), TRXB_VIBFI  (P80892)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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PDB
[Detailed view]		1CL0; 1FL2; 1HYU; 1TDE; 1VDC; 2A87; 2Q0K; 2Q0L; 3D8X; 3ISH; 3ITJ;

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