Entry: PS00591

General information about the entry
Entry name GLYCOSYL_HYDROL_F10
Accession number PS00591
Entry type PATTERN
Date DEC-1991 (CREATED); APR-2006 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00510
Associated ProRule PRU10061
Name and characterization of the entry
DescriptionGlycosyl hydrolases family 10 active site.
Pattern [GTA]-{QNAG}-{GSV}-[LIVN]-x-[IVMF]-[ST]-E-[LIY]-[DN]-[LIVMF].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 67 hits in 67 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 36 hits in 36 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 31 hits in 31 different sequences
  • Number of known missed hits: 13
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 4
  • Precision (true hits / (true hits + false positives)): 53.73 %
  • Recall (true hits / (true hits + false negatives)): 73.47 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 8,active_site
  • VERSION: 2
Cross-references
UniProtKB/Swiss-Prot True positive hits:
CEXY_CLOSR  (P40942), GUNB_CALSA  (P10474), GUNF_FUSOX  (P46239), 
GUX_CELFI   (P07986), XLNA_AGABI  (O60206), XYN1_GEOSE  (P40943), 
XYN2_GEOSE  (P45703), XYN4_CALSA  (P23557), XYNA1_PAESJ (C6CRV0), 
XYNA_ASPAC  (O59859), XYNA_ASPKW  (P33559), XYNA_BACHD  (P07528), 
XYNA_BACOV  (P49942), XYNA_BUTFI  (P23551), XYNA_CALSA  (P23556), 
XYNA_CALSR  (P40944), XYNA_CELJU  (P14768), XYNA_CRYAL  (P07529), 
XYNA_PENCH  (P29417), XYNA_PENSI  (P56588), XYNA_PRERU  (P48789), 
XYNA_RUMFL  (P29126), XYNA_STRLI  (P26514), XYNA_THEAU  (P23360), 
XYNA_THEMA  (Q60037), XYNA_THENE  (Q60042), XYNA_THESA  (P36917), 
XYNB_BUTFI  (P26223), XYNB_CELJU  (P23030), XYNC_ASPNC  (A2QFV7), 
XYNC_ASPNG  (C5J411), XYNC_PAEBA  (O69230), XYNF1_ASPFN (B8NER4), 
XYNX_CLOTM  (P38535), XYNY_CLOTM  (P51584), XYNZ_CLOTH  (P10478)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
XYNA_DICTH  (Q12603), XYNB_PAEBA  (O69231), XYNB_THENE  (Q60041), 
XYNC_ASPCL  (A1CHQ0), XYNC_ASPFC  (B0Y6E0), XYNC_ASPFU  (Q0H904), 
XYNC_ASPTE  (Q4JHP5), XYNC_ASPTN  (Q0CBM8), XYNC_EMENI  (Q00177), 
XYNC_NEOFI  (A1CX14), XYNF1_ASPOR (O94163), XYNF3_ASPFN (B8NXJ2), 
XYNF3_ASPOR (Q96VB6)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
XYNA_DICB4  (P80718), XYNA_FUSO4  (B3A0S5), XYNA_GLOTR  (P84195), 
XYNB_DICB4  (P80717)
False positive hits (sequences which do not belong to the set under consideration):
BAHL1_ORYSI (A2XK56), BAHL1_ORYSJ (Q7XZZ3), CBIT_METTH  (O26249), 
CHLB_CHLAT  (Q19V92), CSMD1_HUMAN (Q96PZ7), CSMD2_HUMAN (Q7Z408), 
CSMD3_HUMAN (Q7Z407), CSMD3_MOUSE (Q80T79), DCA12_CHICK (Q5F3R7), 
DIVIB_MACCJ (B9EB52), ENGB_METMP  (Q6LXQ9), EZRA_BACSU  (O34894), 
FBL66_ARATH (Q9LX48), FHY3_ARATH  (Q9LIE5), KCTD6_DANRE (Q6DG99), 
P4_PCVC     (Q8JVB9), PRS39_MOUSE (O70169), PTR1_SCHPO  (O13834), 
RL24_NATPD  (Q3IMX7), RL25_STAA3  (Q2FJE0), RL25_STAAB  (Q2YVY4), 
RL25_STAAC  (Q5HIH4), RL25_STAAM  (Q99WA2), RL25_STAAN  (Q7A7B3), 
RL25_STAAR  (Q6GJH0), RL25_STAAS  (Q6GBY7), RL25_STAAW  (Q7A1S4), 
URC2_LACKL  (Q6YFE6), URC2_YEAST  (Q04411), Y015_SIFVH  (Q914L5), 
YM17_YEAST  (P40207)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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Retrieve the sequence logo from the alignment

PDB
[Detailed view]
1B30; 1B31; 1B3V; 1B3W; 1B3X; 1B3Y; 1B3Z; 1BG4; 1CLX; 1E0V; 1E0W; 1E0X; 1EXP; 1FH7; 1FH8; 1FH9; 1FHD; 1GOK; 1GOM; 1GOO; 1GOQ; 1GOR; 1HIZ; 1I1W; 1I1X; 1J01; 1K6A; 1OD8; 1R85; 1R87; 1TUX; 1V0K; 1V0L; 1V0M; 1V0N; 1W2P; 1W2V; 1W32; 1W3H; 1XAS; 1XYZ; 2BNJ; 2DEP; 2EXO; 2HIS; 2UWF; 2W5F; 2WYS; 2WZE; 2XYL; 3CUF; 3CUG; 3CUH; 3CUI; 3CUJ; 3MMD; 3O2L; 3RDK; 3RO8; 4E4P;

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