Entry: PS00591

General information about the entry

Entry name [info] GH10_1
Accession [info] PS00591
Entry type [info] PATTERN
Date [info] DEC-1991 (CREATED); APR-2006 (DATA UPDATE); JUN-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00510
Associated ProRule [info] PRU10061

Name and characterization of the entry

Description [info] Glycosyl hydrolases family 10 (GH10) active site.
Pattern [info]
[GTA]-{QNAG}-{GSV}-[LIVN]-x-[IVMF]-[ST]-E-[LIY]-[DN]-[LIVMF].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_08 which contains 320'201 sequence entries.


Total number of hits 77 in 77 different sequences
Number of true positive hits 46 in 46 different sequences
Number of 'unknown' hits 0
Number of false positive hits 31 in 31 different sequences
Number of false negative sequences 14
Number of 'partial' sequences 4
Precision (true positives / (true positives + false positives)) 59.74 %
Recall (true positives / (true positives + false negatives)) 76.67 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] active_site at position 8
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
46 sequences

CEXY_CLOSR  (P40942), GUNB_CALSA  (P10474), GUNF_FUSOX  (P46239), 
GUX_CELFI   (P07986), XLNA_AGABI  (O60206), XY10C_CELJA (Q59675), 
XYN1_GEOSE  (P40943), XYN1_RHIOR  (W0HFK8), XYN2_CLAPU  (O74717), 
XYN2_GEOSE  (P45703), XYN4_CALSA  (P23557), XYNA1_PAESJ (C6CRV0), 
XYNA_ASPAC  (O59859), XYNA_ASPKW  (P33559), XYNA_BACHD  (P07528), 
XYNA_BACOV  (P49942), XYNA_BUTFI  (P23551), XYNA_CALSA  (P23556), 
XYNA_CALSR  (P40944), XYNA_CELJU  (P14768), XYNA_CRYAL  (P07529), 
XYNA_PENCH  (P29417), XYNA_PENCN  (Q5S7A8), XYNA_PENPU  (Q9P8J1), 
XYNA_PENSI  (P56588), XYNA_PHACH  (Q9HEZ1), XYNA_PRERU  (P48789), 
XYNA_RUMFL  (P29126), XYNA_STRLI  (P26514), XYNA_THEAU  (P23360), 
XYNA_THEMA  (Q60037), XYNA_THENE  (Q60042), XYNA_THESA  (P36917), 
XYNB_BUTFI  (P26223), XYNB_CELJU  (P23030), XYNB_NEOPA  (Q02290), 
XYNC_ASPNC  (A2QFV7), XYNC_ASPNG  (C5J411), XYNC_PAEBA  (O69230), 
XYNC_PHACH  (B7SIW2), XYND_PENFN  (Q5ZNB1), XYNF1_ASPFN (B8NER4), 
XYNX_CLOTM  (P38535), XYNY_CLOTM  (P51584), XYNZ_CLOTH  (P10478), 
XYN_PENCH   (Q6PRW6)
» More

UniProtKB/Swiss-Prot
False negative sequences
14 sequences

XYFA_PRER2  (D5EY13), XYNA_DICTH  (Q12603), XYNB_PAEBA  (O69231), 
XYNB_THENE  (Q60041), XYNC_ASPCL  (A1CHQ0), XYNC_ASPFC  (B0Y6E0), 
XYNC_ASPFU  (Q0H904), XYNC_ASPTE  (Q4JHP5), XYNC_ASPTN  (Q0CBM8), 
XYNC_EMENI  (Q00177), XYNC_NEOFI  (A1CX14), XYNF1_ASPOR (O94163), 
XYNF3_ASPFN (B8NXJ2), XYNF3_ASPOR (Q96VB6)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
4 sequences

XYNA_DICB4  (P80718), XYNA_FUSO4  (B3A0S5), XYNA_GLOTR  (P84195), 
XYNB_DICB4  (P80717)
» More

UniProtKB/Swiss-Prot
False positive sequences
31 sequences

BAHL1_ORYSI (A2XK56), BAHL1_ORYSJ (Q7XZZ3), CBIT_METTH  (O26249), 
CHLB_CHLAT  (Q19V92), CSMD1_HUMAN (Q96PZ7), CSMD2_HUMAN (Q7Z408), 
CSMD3_HUMAN (Q7Z407), CSMD3_MOUSE (Q80T79), DCA12_CHICK (Q5F3R7), 
DIVIB_MACCJ (B9EB52), ENGB_METMP  (Q6LXQ9), EZRA_BACSU  (O34894), 
FBL66_ARATH (Q9LX48), FHY3_ARATH  (Q9LIE5), KCTD6_DANRE (Q6DG99), 
P4_PCVC     (Q8JVB9), PRS39_MOUSE (O70169), PTR1_SCHPO  (O13834), 
RL24_NATPD  (Q3IMX7), RL25_STAA3  (Q2FJE0), RL25_STAAB  (Q2YVY4), 
RL25_STAAC  (Q5HIH4), RL25_STAAM  (Q99WA2), RL25_STAAN  (Q7A7B3), 
RL25_STAAR  (Q6GJH0), RL25_STAAS  (Q6GBY7), RL25_STAAW  (Q7A1S4), 
URC2_LACKL  (Q6YFE6), URC2_YEAST  (Q04411), Y015_SIFVH  (Q914L5), 
YM17_YEAST  (P40207)
» More

PDB
[Detailed view]
66 PDB

1B30; 1B31; 1B3V; 1B3W; 1B3X; 1B3Y; 1B3Z; 1BG4; 1CLX; 1E0V; 1E0W; 1E0X; 1EXP; 1FH7; 1FH8; 1FH9; 1FHD; 1GOK; 1GOM; 1GOO; 1GOQ; 1GOR; 1HIZ; 1I1W; 1I1X; 1J01; 1K6A; 1OD8; 1R85; 1R87; 1TUX; 1US2; 1US3; 1V0K; 1V0L; 1V0M; 1V0N; 1W2P; 1W2V; 1W32; 1W3H; 1XAS; 1XYZ; 2BNJ; 2DEP; 2EXO; 2HIS; 2UWF; 2W5F; 2WYS; 2WZE; 2XYL; 3CUF; 3CUG; 3CUH; 3CUI; 3CUJ; 3MMD; 3O2L; 3RDK; 3RO8; 4E4P; 4PRW; 4PUD; 4PUE; 4XUY
» More

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