Entry: PS00591

General information about the entry

Entry name [info] GH10_1
Accession [info] PS00591
Entry type [info] PATTERN
Date [info] 01-DEC-1991 CREATED; 01-APR-2006 DATA UPDATE; 05-JUL-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00510
Associated ProRule [info] PRU10061

Name and characterization of the entry

Description [info] Glycosyl hydrolases family 10 (GH10) active site.
Pattern [info] 
[GTA]-{QNAG}-{GSV}-[LIVN]-x-[IVMF]-[ST]-E-[LIY]-[DN]-[LIVMF].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_07 which contains 555'100 sequence entries.


Total number of hits 77 in 77 different sequences
Number of true positive hits 46 in 46 different sequences
Number of 'unknown' hits 0
Number of false positive hits 31 in 31 different sequences
Number of false negative sequences 14
Number of 'partial' sequences 4
Precision (true positives / (true positives + false positives)) 59.74 %
Recall (true positives / (true positives + false negatives)) 76.67 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] active_site at position 8
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 46 sequences 

CEXY_CLOSR  (P40942    ), GUNB_CALSA  (P10474    ), GUNF_FUSOX  (P46239    ), 

GUX_CELFI   (P07986    ), XLNA_AGABI  (O60206    ), XY10C_CELJA (Q59675    ), 
XYN1_GEOSE  (P40943    ), XYN1_RHIOR  (W0HFK8    ), XYN2_CLAPU  (O74717    ), 
XYN2_GEOSE  (P45703    ), XYN4_CALSA  (P23557    ), XYNA1_PAESJ (C6CRV0    ), 
XYNA_ASPAC  (O59859    ), XYNA_ASPKW  (P33559    ), XYNA_BACHD  (P07528    ), 
XYNA_BACOV  (P49942    ), XYNA_BUTFI  (P23551    ), XYNA_CALSA  (P23556    ), 
XYNA_CALSR  (P40944    ), XYNA_CELJU  (P14768    ), XYNA_CRYAL  (P07529    ), 
XYNA_PENCH  (P29417    ), XYNA_PENCN  (Q5S7A8    ), XYNA_PENSI  (P56588    ), 
XYNA_PHACH  (Q9HEZ1    ), XYNA_PRERU  (P48789    ), XYNA_RUMFL  (P29126    ), 
XYNA_STRLI  (P26514    ), XYNA_TALPU  (Q9P8J1    ), XYNA_THEAU  (P23360    ), 
XYNA_THEMA  (Q60037    ), XYNA_THENE  (Q60042    ), XYNA_THESA  (P36917    ), 
XYNB_BUTFI  (P26223    ), XYNB_CELJU  (P23030    ), XYNB_NEOPA  (Q02290    ), 
XYNC_ASPNC  (A2QFV7    ), XYNC_ASPNG  (C5J411    ), XYNC_PAEBA  (O69230    ), 
XYNC_PHACH  (B7SIW2    ), XYND_TALFU  (Q5ZNB1    ), XYNF1_ASPFN (B8NER4    ), 
XYNX_CLOTM  (P38535    ), XYNY_CLOTM  (P51584    ), XYNZ_CLOTH  (P10478    ), 
XYN_PENCH   (Q6PRW6    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 14 sequences 

XYFA_PRER2  (D5EY13    ), XYNA_DICTH  (Q12603    ), XYNB_PAEBA  (O69231    ), 

XYNB_THENE  (Q60041    ), XYNC_ASPCL  (A1CHQ0    ), XYNC_ASPFC  (B0Y6E0    ), 
XYNC_ASPFU  (Q0H904    ), XYNC_ASPTE  (Q4JHP5    ), XYNC_ASPTN  (Q0CBM8    ), 
XYNC_EMENI  (Q00177    ), XYNC_NEOFI  (A1CX14    ), XYNF1_ASPOR (O94163    ), 
XYNF3_ASPFN (B8NXJ2    ), XYNF3_ASPOR (Q96VB6    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 4 sequences 

XYNA_DICB4  (P80718    ), XYNA_FUSO4  (B3A0S5    ), XYNA_GLOTR  (P84195    ), 

XYNB_DICB4  (P80717    )
» more

UniProtKB/Swiss-Prot
False positive sequences		 31 sequences 

BAHL1_ORYSI (A2XK56    ), BAHL1_ORYSJ (Q7XZZ3    ), CBIT_METTH  (O26249    ), 

CHLB_CHLAT  (Q19V92    ), CSMD1_HUMAN (Q96PZ7    ), CSMD2_HUMAN (Q7Z408    ), 
CSMD3_HUMAN (Q7Z407    ), CSMD3_MOUSE (Q80T79    ), DCA12_CHICK (Q5F3R7    ), 
DIVIB_MACCJ (B9EB52    ), ENGB_METMP  (Q6LXQ9    ), EZRA_BACSU  (O34894    ), 
FBL66_ARATH (Q9LX48    ), FHY3_ARATH  (Q9LIE5    ), KCTD6_DANRE (Q6DG99    ), 
P4_PCVC     (Q8JVB9    ), PRS39_MOUSE (O70169    ), PTR1_SCHPO  (O13834    ), 
RL24_NATPD  (Q3IMX7    ), RL25_STAA3  (Q2FJE0    ), RL25_STAAB  (Q2YVY4    ), 
RL25_STAAC  (Q5HIH4    ), RL25_STAAM  (Q99WA2    ), RL25_STAAN  (Q7A7B3    ), 
RL25_STAAR  (Q6GJH0    ), RL25_STAAS  (Q6GBY7    ), RL25_STAAW  (Q7A1S4    ), 
URC2_LACKL  (Q6YFE6    ), URC2_YEAST  (Q04411    ), Y015_SIFVH  (Q914L5    ), 
YM17_YEAST  (P40207    )
» more

PDB
[Detailed view]		 67 PDB

1B30; 1B31; 1B3V; 1B3W; 1B3X; 1B3Y; 1B3Z; 1BG4; 1CLX; 1E0V; 1E0W; 1E0X; 1EXP; 1FH7; 1FH8; 1FH9; 1FHD; 1GOK; 1GOM; 1GOO; 1GOQ; 1GOR; 1HIZ; 1I1W; 1I1X; 1J01; 1K6A; 1OD8; 1R85; 1R87; 1TUX; 1US2; 1US3; 1V0K; 1V0L; 1V0M; 1V0N; 1W2P; 1W2V; 1W32; 1W3H; 1XAS; 1XYZ; 2BNJ; 2DEP; 2EXO; 2HIS; 2UWF; 2W5F; 2WYS; 2WZE; 2XYL; 3CUF; 3CUG; 3CUH; 3CUI; 3CUJ; 3MMD; 3O2L; 3RDK; 3RO8; 4E4P; 4PRW; 4PUD; 4PUE; 4W8L; 4XUY
» more

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