Entry: PS00606

General information about the entry

Entry name [info] B_KETOACYL_SYNTHASE
Accession [info] PS00606
Entry type [info] PATTERN
Date [info] DEC-1991 (CREATED); APR-2006 (DATA UPDATE); JUN-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00529
Associated ProRule [info] PRU10022

Name and characterization of the entry

Description [info] Beta-ketoacyl synthases active site.
Pattern [info]
G-{A}-{KGR}-x(2)-[LIVMFTAP]-{R}-x-[AGC]-C-[STA](2)-[STAG]-x(2)-{LI}-
[LIVMF].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_08 which contains 551'987 sequence entries.


Total number of hits 185 in 176 different sequences
Number of true positive hits 176 in 167 different sequences
Number of 'unknown' hits 0
Number of false positive hits 9 in 9 different sequences
Number of false negative sequences 12
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 95.14 %
Recall (true positives / (true positives + false negatives)) 93.62 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 2
Site [info] active_site at position 9
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
167 sequences

AFOE_EMENI  (Q5BEJ6    ), AFVB_ASPFN  (B8N8R0    ), ALB1_ASPFU  (Q4WZA8    ), 
ANDM_EMEVA  (A0A097ZPE0), APF5_GIBF5  (S0DL59    ), APTA_EMENI  (Q5B0D0    ), 
AUSA_EMENI  (Q5ATJ7    ), BIK1_GIBF5  (S0DZM7    ), CAZM_CHAGB  (A0A0K0MCJ4), 
CCSA_ASPCL  (A1CLY8    ), CEM1_YEAST  (P39525    ), CLA3_CLACD  (A0A125R003), 
ERYA1_SACER (Q03131    ), ERYA2_SACER (Q03132    ), ERYA3_SACER (Q03133    ), 
FABB_BUCAI  (P57193    ), FABB_BUCAP  (Q8KA28    ), FABB_BUCBP  (Q89AY4    ), 
FABB_ECOL6  (P0A954    ), FABB_ECOLI  (P0A953    ), FABB_HAEIN  (P43710    ), 
FABB_PSEAB  (Q02K94    ), FABF_BACSU  (O34340    ), FABF_COXBU  (Q83E37    ), 
FABF_ECO57  (P0AAI7    ), FABF_ECOL6  (P0AAI6    ), FABF_ECOLI  (P0AAI5    ), 
FABF_RHIME  (P56902    ), FABF_SHIFL  (P0AAI8    ), FABF_STAAC  (Q5HHA1    ), 
FABF_STAAM  (Q99VA6    ), FABF_STAAN  (Q7A6F8    ), FABF_STAAR  (Q6GIA3    ), 
FABF_STAAS  (Q6GAU2    ), FABF_STAAU  (Q5TKS0    ), FABF_STAAW  (Q8NXE1    ), 
FABF_SYNY3  (P73283    ), FABF_VIBCH  (Q9KQH9    ), FABF_VIBHA  (P55338    ), 
FAS2_CANAX  (P43098    ), FAS2_CANPC  (G8BAW7    ), FAS2_EMEND  (P78615    ), 
FAS2_EMENI  (Q5B7V0    ), FAS2_LACKL  (Q765N2    ), FAS2_PENPA  (P15368    ), 
FAS2_SCHPO  (Q10289    ), FAS2_YEAST  (P19097    ), FAS_ANSAN   (P36189    ), 
FAS_BOVIN   (Q71SP7    ), FAS_CHICK   (P12276    ), FAS_HUMAN   (P49327    ), 
FAS_MOUSE   (P19096    ), FAS_RAT     (P12785    ), FMAB_ASPFU  (Q4WAY3    ), 
GEDC_ASPTN  (Q0CCY3    ), GSFA_PENAE  (D7PI15    ), KAS1_STRCM  (P41175    ), 
KAS1_STRCN  (Q02578    ), KAS1_STRCO  (P23155    ), KAS1_STRGA  (P16538    ), 
KAS1_STRHA  (Q05356    ), KAS1_STRRM  (P43678    ), KAS1_STRVN  (P16540    ), 
KASA_STRCO  (Q02059    ), KASC1_ARATH (P52410    ), KASC1_HORVU (P23902    ), 
KASC2_ARATH (Q9C9P4    ), KASM_ARATH  (Q8L3X9    ), LNKS_ASPTE  (Q9Y8A5    ), 
LNKS_ASPTN  (Q0C8M3    ), LOVF_ASPTE  (Q9Y7D5    ), MCAS_MYCBO  (Q02251    ), 
MLCA_PENCI  (Q8J0F7    ), MLCB_PENCI  (Q8J0F5    ), MOKA_MONPI  (Q3S2T9    ), 
MOKB_MONPI  (Q3S2U6    ), MPAC_PENBR  (F1DBA9    ), MSAS_PENPA  (P22367    ), 
MSL7_MYCBO  (Q7TXK8    ), MSL7_MYCMM  (B2HIL7    ), MYCA_BACIU  (Q9R9J1    ), 
NODE_RHILT  (P04684    ), NODE_RHILV  (P04683    ), NODE_RHIME  (P06230    ), 
NODE_RHIS3  (P72331    ), NOE4_RHIML  (P06231    ), NRP14_ASPFU (Q4WAZ9    ), 
OL56_STRAT  (Q07017    ), OXSM_BOVIN  (Q0VCA7    ), OXSM_HUMAN  (Q9NWU1    ), 
OXSM_MOUSE  (Q9D404    ), PATK_ASPCL  (A1CFL8    ), PHAS_MYCBO  (Q7TVK8    ), 
PHAS_MYCBP  (A1KQG0    ), PHAS_MYCTA  (A5U9F4    ), PHAS_MYCTO  (P9WQE8    ), 
PHAS_MYCTU  (P9WQE9    ), PIKA1_STRVZ (Q9ZGI5    ), PIKA2_STRVZ (Q9ZGI4    ), 
PIKA3_STRVZ (Q9ZGI3    ), PIKA4_STRVZ (Q9ZGI2    ), PKS10_DICDI (B0G103    ), 
PKS13_DICDI (Q559A9    ), PKS14_DICDI (Q558Y6    ), PKS15_MYCTU (P96284    ), 
PKS16_DICDI (Q869W9    ), PKS17_DICDI (Q869X2    ), PKS18_DICDI (Q54TW0    ), 
PKS19_DICDI (Q54T36    ), PKS1_DICDI  (Q55E72    ), PKS21_DICDI (B0G138    ), 
PKS22_DICDI (Q54QD3    ), PKS23_DICDI (Q54QD1    ), PKS24_DICDI (Q54KU5    ), 
PKS25_DICDI (Q54KU3    ), PKS27_ASPFN (B8MYS6    ), PKS27_DICDI (Q54G30    ), 
PKS28_DICDI (B0G170    ), PKS29_DICDI (Q54FQ3    ), PKS2_DICDI  (Q55DM7    ), 
PKS30_DICDI (Q54FQ2    ), PKS31_DICDI (Q54FQ1    ), PKS32_DICDI (Q54FP8    ), 
PKS33_DICDI (Q54FN7    ), PKS34_DICDI (Q54FN2    ), PKS37_DICDI (Q54FI3    ), 
PKS38_DICDI (Q54FD2    ), PKS39_DICDI (Q54FC8    ), PKS3_DICDI  (Q55CN6    ), 
PKS40_DICDI (Q54ED7    ), PKS41_DICDI (Q54ED6    ), PKS42_DICDI (Q54D44    ), 
PKS44_DICDI (Q54B51    ), PKS5_DICDI  (Q86JI5    ), PKS5_MYCS2  (A0R1E8    ), 
PKS5_MYCTU  (O53901    ), PKS6_DICDI  (B0G0Z9    ), PKS7_DICDI  (B0G100    ), 
PKS8_DICDI  (B0G101    ), PKS9_DICDI  (Q86AE3    ), PKSJ_BACSU  (P40806    ), 
PKSL_BACSU  (Q05470    ), PKSM_BACSU  (P40872    ), PKSN_BACSU  (O31782    ), 
PKSR_BACSU  (O31784    ), PPSA_MYCBO  (Q7TXM0    ), PPSA_MYCTO  (P9WQE6    ), 
PPSA_MYCTU  (P9WQE7    ), PPSB_MYCBO  (Q7TXL9    ), PPSB_MYCTO  (P9WQE4    ), 
PPSB_MYCTU  (P9WQE5    ), PPSC_MYCBO  (Q7TXL8    ), PPSC_MYCTU  (P96202    ), 
PPSD_MYCBO  (Q7TXL7    ), PPSD_MYCTO  (P9WQE2    ), PPSD_MYCTU  (P9WQE3    ), 
PPSE_MYCBO  (Q7TXL6    ), PPSE_MYCTO  (P9WQE0    ), PPSE_MYCTU  (P9WQE1    ), 
PYR2_ASPFU  (Q4WLD4    ), STCJ_EMENI  (Q00681    ), TPCC_ASPFU  (Q4WQZ5    ), 
TROPA_TALSN (B8M9J9    ), TRT4_ASPTN  (Q0C8A4    ), VRTA_PENAE  (D7PHZ2    ), 
WA_EMENI    (Q03149    ), YANA_ASPNA  (G3Y419    )
» more

UniProtKB/Swiss-Prot
False negative sequences
12 sequences

BEKAS_PSEAE (Q9HYV7    ), FAB1_MYCBO  (P63455    ), FAB1_MYCLE  (Q9CBS7    ), 
FAB1_MYCTO  (P9WQD8    ), FAB1_MYCTU  (P9WQD9    ), FAB2_MYCBO  (P63457    ), 
FAB2_MYCLE  (O69473    ), FAB2_MYCTO  (P9WQD6    ), FAB2_MYCTU  (P9WQD7    ), 
PIGJ_SERS3  (Q5W262    ), PKS26_DICDI (Q54IX3    ), PKS45_DICDI (Q54B49    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

FAS_CAPHI   (P08757    ), FAS_RABIT   (P07855    )

		
UniProtKB/Swiss-Prot
False positive sequences
9 sequences

GLPB_HAEDU  (Q7VM49    ), KDSB_MYXXD  (Q1DDB3    ), MDH_PSYIN   (A1SRP8    ), 
MNMG_ERYLH  (Q2N6I8    ), NEUA_BOVIN  (Q3SZM5    ), NEUA_HUMAN  (Q8NFW8    ), 
NEUA_PONAB  (Q5R6R5    ), PUS5_ORYSJ  (Q0DST9    ), Y1105_ARATH (O04086    )
» more

PDB
[Detailed view]
46 PDB

1B3N; 1DD8; 1E5M; 1FJ4; 1FJ8; 1G5X; 1H4F; 1KAS; 1TQY; 1W0I; 2AQ7; 2AQB; 2BUH; 2BUI; 2BYW; 2BYX; 2BYY; 2BYZ; 2BZ3; 2BZ4; 2CDH; 2GFW; 2GFY; 2GQD; 2HG4; 2IWY; 2IWZ; 2IX4; 2PFF; 2QO3; 2UV8; 2VB7; 2VB8; 2VB9; 2VBA; 2VKZ; 3HHD; 3HMJ; 4JRH; 4JRM; 4LS5; 4LS6; 4LS7; 4LS8; 4NA1; 5BP1
» more

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