Entry: PS00608

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General information about the entry

Entry name [info] GLYCOSYL_HYDROL_F2_2
Accession [info] PS00608
Entry type [info] PATTERN
Date [info] JUN-1992 (CREATED); APR-2006 (DATA UPDATE); JUN-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00531

Name and characterization of the entry

Description [info] Glycosyl hydrolases family 2 acid/base catalyst.
Pattern [info]
[DENQLF]-[KRVW]-N-[HRY]-[STAPV]-[SAC]-[LIVMFS]-[LIVMFSA]-[LIVMFS]-W-
[GSV]-x(2,3)-N-E.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_07 which contains 546'000 sequence entries.


Total number of hits 80 in 80 different sequences
Number of true positive hits 80 in 80 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 22
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 78.43 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] active_site at position 12
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
80 sequences

BGA2_ECOLI  (P06864), BGAL1_ENTCL (Q47077), BGAL1_KLEP7 (A6T8X0), 
BGAL1_KLEPN (P06219), BGAL2_ENTCL (Q2XQU3), BGAL2_KLEP7 (A6TI29), 
BGAL2_KLEPN (A7KGA5), BGAL_ACTPL  (P70753), BGAL_ALTMD  (B4S2K9), 
BGAL_ARTSB  (Q59140), BGAL_BACHD  (Q9K9C6), BGAL_BACMD  (O52847), 
BGAL_CITK8  (A8AKB8), BGAL_CLOAT  (P24131), BGAL_CROS8  (A7MN76), 
BGAL_ECO24  (A7ZI91), BGAL_ECO27  (B7UJI9), BGAL_ECO57  (Q8X685), 
BGAL_ECO5E  (B5Z2P7), BGAL_ECOHS  (A7ZWZ1), BGAL_ECOK1  (A1A831), 
BGAL_ECOL5  (Q0TKT1), BGAL_ECOL6  (Q8FKG6), BGAL_ECOLC  (B1J0T5), 
BGAL_ECOLI  (P00722), BGAL_ECOLU  (B7N8Q1), BGAL_ECOLX  (Q8VNN2), 
BGAL_ECOSM  (B1LIM9), BGAL_ECOUT  (Q1RFJ2), BGAL_ENT38  (A4W7D2), 
BGAL_ENTAG  (A3FEW8), BGAL_ERWT9  (B2VHN8), BGAL_KLEP3  (B5XQY2), 
BGAL_KLULA  (P00723), BGAL_LACAC  (O07684), BGAL_LACDA  (Q1G9Z4), 
BGAL_LACDE  (P0C1Y0), BGAL_LACHE  (Q7WTB4), BGAL_LACLA  (Q48727), 
BGAL_LACSK  (Q48846), BGAL_LEULA  (Q02603), BGAL_OENOB  (Q04F24), 
BGAL_PECAS  (Q6D736), BGAL_PHOPR  (Q6LL68), BGAL_PSEHA  (P81650), 
BGAL_PSYIN  (A1SWB8), BGAL_SALAR  (A9MQ82), BGAL_SERP5  (A8GGN3), 
BGAL_SHIDS  (Q32JB6), BGAL_SHISS  (Q3Z583), BGAL_STAXY  (O33815), 
BGAL_STRTR  (P23989), BGAL_THEMA  (Q56307), BGAL_THEP3  (P77989), 
BGAL_THETU  (P26257), BGAL_VIBC3  (A5F5U6), BGAL_VIBVU  (Q8D4H3), 
BGAL_VIBVY  (Q7MG04), BGAL_YERE8  (A1JTC4), BGAL_YERP3  (A7FH78), 
BGAL_YERPA  (Q1C6T8), BGAL_YERPB  (B2K6E6), BGAL_YERPE  (Q7CIZ3), 
BGAL_YERPG  (A9R0J8), BGAL_YERPN  (Q1CI76), BGAL_YERPP  (A4TLL5), 
BGAL_YERPS  (Q669R9), BGAL_YERPY  (B1JI86), BGH2A_BACO1 (A7LXS9), 
BGLR_CANFA  (O18835), BGLR_CHLAE  (O77695), BGLR_ECOLI  (P05804), 
BGLR_FELCA  (O97524), BGLR_HUMAN  (P08236), BGLR_MOUSE  (P12265), 
BGLR_PIG    (Q4FAT7), BGLR_PONAB  (Q5R5N6), BGLR_RAT    (P06760), 
EBM_ARATH   (Q75W54), EBM_LILLO   (Q5H7P5)
» More

UniProtKB/Swiss-Prot
False negative sequences
22 sequences

BGAL_AERHH  (A0KQH4), BGAL_LEUMM  (Q03WL0), BGAL_RHIML  (Q59750), 
MANBA_ASPAC (O74168), MANBA_ASPCL (A1CTM5), MANBA_ASPFC (B0Y7S2), 
MANBA_ASPFN (B8NP78), MANBA_ASPFU (Q4WMS9), MANBA_ASPNC (A2QWU9), 
MANBA_ASPOR (Q2UN00), MANBA_ASPTN (Q0CI48), MANBA_EMENI (Q5BCI8), 
MANBA_NEOFI (A1DMT2), MANBB_ASPCL (A1CGA8), MANBB_ASPFC (B0YBU9), 
MANBB_ASPFN (B8NW36), MANBB_ASPFU (Q4WAH4), MANBB_ASPNC (A2QYN2), 
MANBB_ASPOR (Q2TXB7), MANBB_ASPTN (Q0CCA0), MANBB_EMENI (Q5B7W2), 
MANBB_NEOFI (A1D911)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

BGAL_RHIRD  (P30812)

		
PDB
[Detailed view]
56 PDB

1BGL; 1BGM; 1BHG; 1DP0; 1F49; 1F4A; 1F4H; 1GHO; 1HN1; 1JYN; 1JYV; 1JYW; 1JYX; 1JYY; 1JYZ; 1JZ0; 1JZ1; 1JZ2; 1JZ3; 1JZ4; 1JZ5; 1JZ6; 1JZ7; 1JZ8; 1PX3; 1PX4; 3DYM; 3DYO; 3DYP; 3E1F; 3HN3; 3I3B; 3I3D; 3I3E; 3IAP; 3IAQ; 3K46; 3K4D; 3MUY; 3MUZ; 3MV0; 3MV1; 3OB8; 3OBA; 3SEP; 3T08; 3T09; 3T0A; 3T0B; 3T0D; 3T2O; 3T2P; 3T2Q; 4CKD; 4DUV; 4DUW
» More

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