| General information about the entry |
| Entry name |
OSTEONECTIN_1 |
| Accession number |
PS00612 |
| Entry type |
PATTERN |
| Date |
JUN-1992 (CREATED); DEC-2004 (DATA UPDATE); MAR-2013 (INFO UPDATE).
|
| PROSITE Documentation |
PDOC00535 |
| Name and characterization of the entry |
| Description | Osteonectin domain signature 1.
|
| Pattern |
C-x-[DNS]-x(2)-C-x(2)-G-[KRH]-x-C-x(6,7)-P-x-C-x-C-x(3,5)-C-P.
|
| Numerical results |
- UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
- Total number of hits in UniProtKB/Swiss-Prot: 15 hits in 15 different sequences
- Number of hits on proteins that are known to belong to the set under consideration: 15 hits in 15 different sequences
- Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
- Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
- Number of known missed hits: 0
- Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 1
- Precision (true hits / (true hits + false positives)): 100.00 %
- Recall (true hits / (true hits + false negatives)): 100.00 %
|
| Comments |
- Taxonomic range: Eukaryotes
- Maximum known number of repetitions of the pattern in a single protein: 1
- `Interesting' site in the pattern: 1,disulfide(?)
- `Interesting' site in the pattern: 5,disulfide(?)
- `Interesting' site in the pattern: 10,disulfide(?)
- `Interesting' site in the pattern: 14,disulfide(?)
- `Interesting' site in the pattern: 16,disulfide(?)
- `Interesting' site in the pattern: 18,disulfide(?)
- VERSION: 1
|
| Cross-references |
| UniProtKB/Swiss-Prot |
True positive hits:SPRC_BOVIN (P13213), SPRC_CAEEL (P34714), SPRC_CHICK (P36377),
SPRC_COTJA (O93390), SPRC_HUMAN (P09486), SPRC_MOUSE (P07214),
SPRC_PIG (P20112), SPRC_PONAB (Q5R767), SPRC_RABIT (P36233),
SPRC_RAT (P16975), SPRC_XENLA (P36378), SPRL1_COTJA (P23499),
SPRL1_HUMAN (Q14515), SPRL1_MOUSE (P70663), SPRL1_RAT (P24054) `Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):SPRC_NEOVI (P36379) Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
[Clustal format, color, condensed view]
[Clustal format, color]
[Clustal format, plain text]
[Fasta format]
Retrieve the sequence logo from the alignment
|
PDB [Detailed view] |
1BMO; 1NUB; 2V53; |
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