Entry: PS00625

General information about the entry
Entry name RCC1_1
Accession number PS00625
Entry type PATTERN
Date JUN-1992 (CREATED); NOV-1997 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00544
Associated ProRule PRU00235
Name and characterization of the entry
DescriptionRegulator of chromosome condensation (RCC1) signature 1.
Pattern G-x-N-D-x(2)-[AV]-L-G-R-x-T.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 8 hits in 8 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 8 hits in 8 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 70
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 10.26 %
Comments
  • Taxonomic range: Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
RCC1_CANAX  (P52499), RCC1_DROME  (P25171), RCC1_HUMAN  (P18754), 
RCC1_MESAU  (P23800), RCC1_MOUSE  (Q8VE37), RCC1_SCHPO  (P28745), 
RCC1_XENLA  (P25183), RCC1_YEAST  (P21827)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
ALS2_HUMAN  (Q96Q42), ALS2_MOUSE  (Q920R0), ALS2_PANTR  (Q5BIW4), 
ALS2_RAT    (P0C5Y8), ATS1_YEAST  (P31386), BTB1_SCHPO  (O74881), 
FBX24_HUMAN (O75426), FBX24_MACFA (Q4R327), FBX24_MOUSE (Q9D417), 
FMP25_YEAST (Q08023), GACGG_DICDI (Q54VW7), GEFC_DICDI  (Q8IS20), 
HERC1_HUMAN (Q15751), HERC2_DROME (Q9VR91), HERC2_HUMAN (O95714), 
HERC2_MOUSE (Q4U2R1), HERC3_HUMAN (Q15034), HERC4_HUMAN (Q5GLZ8), 
HERC4_MOUSE (Q6PAV2), HERC4_RAT   (Q5PQN1), HERC5_HUMAN (Q9UII4), 
HERC6_HUMAN (Q8IVU3), HERC6_MOUSE (F2Z461), HIW_DROME   (Q9NB71), 
IBTK_HUMAN  (Q9P2D0), IBTK_MOUSE  (Q6ZPR6), IBTK_XENLA  (Q6NRS1), 
MYCB2_HUMAN (O75592), MYCB2_MOUSE (Q7TPH6), NEK8_DANRE  (Q90XC2), 
NEK8_HUMAN  (Q86SG6), NEK8_MOUSE  (Q91ZR4), NEK9_HUMAN  (Q8TD19), 
NEK9_MOUSE  (Q8K1R7), NEK9_XENLA  (Q7ZZC8), POF9_SCHPO  (O74381), 
RCBT1_HUMAN (Q8NDN9), RCBT1_MOUSE (Q6NXM2), RCBT2_HUMAN (O95199), 
RCBT2_MOUSE (Q99LJ7), RCBT2_PONAB (Q5RCZ7), RCBT2_RAT   (Q6P798), 
RCC1_CAEEL  (Q18211), RCC2_DANRE  (Q6NYE2), RCC2_HUMAN  (Q9P258), 
RCC2_MOUSE  (Q8BK67), RCC2_XENLA  (Q52KW8), RCCD1_HUMAN (A6NED2), 
RCCD1_MACFA (Q4R828), RCCD1_MOUSE (Q8BTU7), RCCDA_DICDI (Q54X24), 
RCCDB_DICDI (P0C7G9), RCCDC_DICDI (Q54Q89), RPGRH_CAEEL (Q5DX34), 
RPGR_CANFA  (Q9N1T2), RPGR_HUMAN  (Q92834), RPGR_MOUSE  (Q9R0X5), 
RPM1_CAEEL  (Q17551), SAF1_YEAST  (P38352), SPKUL_DICDI (Q8SSY6), 
SRGEF_BOVIN (Q3MHW0), SRGEF_HUMAN (Q9UGK8), SRGEF_MOUSE (Q80YD6), 
TIRA_DICDI  (Q54HT1), TITIN_HUMAN (Q8WZ42), TITIN_MOUSE (A2ASS6), 
UVR8_ARATH  (Q9FN03), WBS16_HUMAN (Q96I51), WBS16_MOUSE (Q9CYF5), 
YF94_SCHPO  (O42645)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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PDB
[Detailed view]		 1A12; 1I2M; 3MVD; 3OF7;

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