Entry: PS00628

General information about the entry

Entry name [info] RIBOSOMAL_S19E
Accession [info] PS00628
Entry type [info] PATTERN
Date [info] JUN-1992 (CREATED); DEC-2001 (DATA UPDATE); MAY-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00546

Name and characterization of the entry

Description [info] Ribosomal protein S19e signature.
Pattern [info]
P-x(6)-[SANG]-x(2)-[LIVMAC]-x-R-x-[ALIV]-[LV]-[QH]-x-L-[EQ].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_06 which contains 551'385 sequence entries.


Total number of hits 35 in 35 different sequences
Number of true positive hits 35 in 35 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 3
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 92.11 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
35 sequences

RS191_ARATH (Q9SGA6    ), RS192_ARATH (Q9LF30    ), RS193_ARATH (Q9FNP8    ), 
RS19A_DROME (P39018    ), RS19A_SCHPO (P58234    ), RS19A_YEAST (P07280    ), 
RS19B_DROME (Q7KS38    ), RS19B_SCHPO (P79016    ), RS19B_YEAST (P07281    ), 
RS19E_AERPE (Q9YD22    ), RS19E_ARCFU (O28210    ), RS19E_HALMA (P19952    ), 
RS19E_METJA (P54057    ), RS19E_METTH (O27653    ), RS19E_PYRAB (Q9V0G8    ), 
RS19E_PYRHO (O59041    ), RS19G_ASCSU (P24494    ), RS19S_ASCSU (P39698    ), 
RS19_ARGIR  (Q8ITC3    ), RS19_BOVIN  (Q32PD5    ), RS19_BRABE  (Q8T5Z4    ), 
RS19_CAEEL  (O18650    ), RS19_EMENI  (P27073    ), RS19_ENTHI  (O15631    ), 
RS19_GILMI  (Q9DFR5    ), RS19_HUMAN  (P39019    ), RS19_ICTPU  (Q90YQ4    ), 
RS19_MOUSE  (Q9CZX8    ), RS19_MYAAR  (Q94613    ), RS19_MYXGL  (Q9Y0H3    ), 
RS19_ORYSJ  (P40978    ), RS19_PAGMA  (P61155    ), RS19_PIG    (Q29308    ), 
RS19_PONAB  (Q5R8M9    ), RS19_RAT    (P17074    )
» more

UniProtKB/Swiss-Prot
False negative sequences
3 sequences

RS19E_THEAC (Q9HM21    ), RS19E_THEVO (Q97CU4    ), RS19_DICDI  (Q54X51    )

		
PDB
[Detailed view]
3 PDB

2V7F; 5A2Q; 5FLX

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