Entry: PS00655

General information about the entry
Entry name GLYCOSYL_HYDROL_F6_1
Accession number PS00655
Entry type PATTERN
Date JUN-1992 (CREATED); NOV-1997 (DATA UPDATE); APR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00563
Associated ProRule PRU10056
Name and characterization of the entry
DescriptionGlycosyl hydrolases family 6 signature 1.
Pattern V-x-Y-x(2)-P-x-R-D-C-[GSAF]-x(2)-[GSA](2)-x-G.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_06, total number of sequence entries in that release: 540261.
  • Total number of hits in UniProtKB/Swiss-Prot: 16 hits in 16 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 16 hits in 16 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 2
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 88.89 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 8,active_site(?)
  • `Interesting' site in the pattern: 9,disulfide
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
CBHC_ASPCL  (A1CCN4), CBHC_ASPFC  (B0XWL3), CBHC_ASPFU  (Q4WFK4), 
CBHC_ASPNC  (A2QYR9), CBHC_ASPTN  (Q0CFP1), CBHC_EMENI  (Q5B2E8), 
CBHC_NEOFI  (A1DJQ7), GUN1_STRSS  (P13933), GUN2_THEFU  (P26222), 
GUNA_CELFI  (P07984), GUNA_THEBI  (P26414), GUNB_FUSOX  (P46236), 
GUX2_HYPJE  (P07987), GUX3_AGABI  (P49075), GUX6_HUMIN  (Q9C1S9), 
GUXA_CELFA  (P50401)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
GUN1_STRHA  (P33682), GUN6_HUMIN  (Q7SIG5)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1BVW; 1GZ1; 1HGY; 1OC5; 1OC6; 1OC7; 1OCB; 1OCJ; 1OCN; 1QK0; 1QK2; 1TML; 2BVW; 3CBH; 4AU0; 4AX6; 4AX7; 4I5R; 4I5U;

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