To improve security and privacy, we are moving our web pages and services from HTTP to HTTPS.
To give users of web services time to transition to HTTPS, we will support separate HTTP and HTTPS services until the end of 2017.
From January 2018 most HTTP traffic will be automatically redirected to HTTPS. [more...]
View this page in https
Entry: PS00660

General information about the entry

Entry name [info] FERM_1
Accession [info] PS00660
Entry type [info] PATTERN
Date [info] 01-JUN-1992 CREATED; 01-DEC-2002 DATA UPDATE; 27-SEP-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00566

Name and characterization of the entry

Description [info] FERM domain signature 1.
Pattern [info] 
W-[LIV]-x(3)-[KRQ]-x-[LIVM]-x(2)-[QH]-x(0,2)-[LIVMF]-x(6,8)-[LIVMF]-
x(3,5)-F-[FY]-x(2)-[DENS].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_09 which contains 555'594 sequence entries.


Total number of hits 79 in 79 different sequences
Number of true positive hits 79 in 79 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 101
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 43.89 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 79 sequences 

41_BOVIN    (Q9N179    ), 41_CANLF    (Q6Q7P4    ), 41_HUMAN    (P11171    ), 

41_MOUSE    (P48193    ), 41_XENLA    (P11434    ), E41L1_HUMAN (Q9H4G0    ), 
E41L1_MOUSE (Q9Z2H5    ), E41L1_RAT   (Q9WTP0    ), E41L2_HUMAN (O43491    ), 
E41L2_MOUSE (O70318    ), E41L3_HUMAN (Q9Y2J2    ), E41L3_MOUSE (Q9WV92    ), 
E41L4_DANRE (O57457    ), E41L5_BOVIN (Q58CU2    ), E41L5_CANLF (Q9MYU8    ), 
E41L5_HUMAN (Q9HCM4    ), E41L5_MOUSE (Q8BGS1    ), E41L5_RAT   (Q5FVG2    ), 
E41LA_HUMAN (Q9HCS5    ), E41LA_MOUSE (P52963    ), EZRI_BOVIN  (P31976    ), 
EZRI_HUMAN  (P15311    ), EZRI_MOUSE  (P26040    ), EZRI_RABIT  (Q8HZQ5    ), 
EZRI_RAT    (P31977    ), FARP1_CHICK (F1P065    ), FARP1_HUMAN (Q9Y4F1    ), 
FARP1_MOUSE (F8VPU2    ), FARP1_PONAB (Q5RAB8    ), FARP1_RAT   (F1LYQ8    ), 
FARP2_HUMAN (O94887    ), FARP2_MOUSE (Q91VS8    ), FRM4A_HUMAN (Q9P2Q2    ), 
FRM4A_MOUSE (Q8BIE6    ), FRMA_DICDI  (Q54EW0    ), FRMD3_HUMAN (A2A2Y4    ), 
FRMD3_MOUSE (Q8BHD4    ), FRMD3_PONAB (Q5R803    ), FRMD3_XENTR (Q0P4Q4    ), 
FRMD5_HUMAN (Q7Z6J6    ), FRMD5_MOUSE (Q6P5H6    ), FRMD7_HUMAN (Q6ZUT3    ), 
FRMD7_MOUSE (A2AD83    ), MERL_HUMAN  (P35240    ), MERL_MOUSE  (P46662    ), 
MERL_PAPAN  (P59750    ), MERL_RAT    (Q63648    ), MOEH_AEDAE  (Q170J7    ), 
MOEH_ANOGA  (Q7PS12    ), MOEH_CULQU  (B0WYY2    ), MOEH_DROME  (P46150    ), 
MOEH_DROPS  (Q29GR8    ), MOES_BOVIN  (Q2HJ49    ), MOES_HUMAN  (P26038    ), 
MOES_LYTVA  (P52962    ), MOES_MOUSE  (P26041    ), MOES_PIG    (P26042    ), 
MOES_RAT    (O35763    ), PTN14_HUMAN (Q15678    ), PTN14_MOUSE (Q62130    ), 
PTN21_HUMAN (Q16825    ), PTN21_MOUSE (Q62136    ), PTN21_RAT   (Q62728    ), 
PTN3_HUMAN  (P26045    ), PTN4_HUMAN  (P29074    ), PTN4_MOUSE  (Q9WU22    ), 
PTP1_CAEEL  (P28191    ), RADI_BOVIN  (Q32LP2    ), RADI_CHICK  (Q9PU45    ), 
RADI_HUMAN  (P35241    ), RADI_MOUSE  (P26043    ), RADI_PIG    (P26044    ), 
TALA1_DICDI (P0CE95    ), TALA_DICDI  (P0CE94    ), TALB_DICDI  (Q54K81    ), 
TLN1_CHICK  (P54939    ), TLN1_HUMAN  (Q9Y490    ), TLN1_MOUSE  (P26039    ), 
UN112_CAEEL (Q18685    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 101 sequences 

41_DROME    (Q9V8R9    ), E41LB_HUMAN (Q9H329    ), E41LB_MOUSE (Q9JMC8    ), 

E41LB_RAT   (B2RYE5    ), EXPA_DROME  (Q07436    ), FAK1_CHICK  (Q00944    ), 
FAK1_HUMAN  (Q05397    ), FAK1_MOUSE  (P34152    ), FAK1_RAT    (O35346    ), 
FAK1_XENLA  (Q91738    ), FAK2_HUMAN  (Q14289    ), FAK2_MOUSE  (Q9QVP9    ), 
FAK2_RAT    (P70600    ), FERM1_HUMAN (Q9BQL6    ), FERM1_MOUSE (P59113    ), 
FERM1_PONAB (Q5R8M5    ), FERM2_DANRE (F1Q8X5    ), FERM2_HUMAN (Q96AC1    ), 
FERM2_MOUSE (Q8CIB5    ), FR8P1_HUMAN (Q9BZ68    ), FRM4B_HUMAN (Q9Y2L6    ), 
FRMB_DICDI  (Q55E74    ), FRMC_DICDI  (P0CD60    ), FRMD1_HUMAN (Q8N878    ), 
FRMD6_HUMAN (Q96NE9    ), FRMD6_MOUSE (Q8C0V9    ), FRMD6_RAT   (Q8VII0    ), 
FRMD8_HUMAN (Q9BZ67    ), FRMD8_MOUSE (Q3UFK8    ), FRMD8_RAT   (Q5U2R3    ), 
FRMD8_XENLA (Q7ZWP1    ), FRMD8_XENTR (Q0IJ35    ), FRPD1_HUMAN (Q5SYB0    ), 
FRPD1_MOUSE (A2AKB4    ), FRPD2_HUMAN (Q68DX3    ), FRPD3_HUMAN (Q5JV73    ), 
FRPD4_HUMAN (Q14CM0    ), FRPD4_MOUSE (A2AFR3    ), HUM6_CAEBR  (Q622K8    ), 
HUM6_CAEEL  (P91443    ), JAK1_CYPCA  (Q09178    ), JAK1_DANRE  (O12990    ), 
JAK1_HUMAN  (P23458    ), JAK1_MOUSE  (P52332    ), JAK2_CHICK  (Q75R65    ), 
JAK2_HUMAN  (O60674    ), JAK2_MOUSE  (Q62120    ), JAK2_PIG    (O19064    ), 
JAK2_PONAB  (Q5RB23    ), JAK2_RAT    (Q62689    ), JAK3_HUMAN  (P52333    ), 
JAK3_MOUSE  (Q62137    ), JAK3_RAT    (Q63272    ), JAK_DROME   (Q24592    ), 
KIN32_CAEEL (Q95YD4    ), KN14E_ARATH (Q9FHN8    ), KN14I_ORYSJ (Q7XPJ0    ), 
KRIT1_BOVIN (Q6TNJ1    ), KRIT1_DANRE (F1REV3    ), KRIT1_HUMAN (O00522    ), 
KRIT1_MOUSE (Q6S5J6    ), MERH_DROME  (Q24564    ), MYLIA_DANRE (Q6TEM9    ), 
MYLIB_DANRE (Q05AK5    ), MYLIP_HUMAN (Q8WY64    ), MYLIP_MOUSE (Q8BM54    ), 
MYLIP_RAT   (D3ZDI6    ), MYO10_BOVIN (P79114    ), MYO10_HUMAN (Q9HD67    ), 
MYO10_MOUSE (F8VQB6    ), MYO10_RAT   (D3ZJP6    ), MYO15_HUMAN (Q9UKN7    ), 
MYO15_MOUSE (Q9QZZ4    ), MYO7A_AEDAE (Q17LW0    ), MYO7A_DROME (Q9V3Z6    ), 
MYO7A_DROPS (Q29P71    ), MYO7A_HUMAN (Q13402    ), MYO7A_MOUSE (P97479    ), 
MYO7B_HUMAN (Q6PIF6    ), MYO7B_MOUSE (Q99MZ6    ), MYOG_DICDI  (Q86AC8    ), 
MYOI_DICDI  (Q9U1M8    ), PKHH1_DANRE (Q00IB7    ), PKHH1_HUMAN (Q9ULM0    ), 
PKHH1_MOUSE (Q80TI1    ), PKHH2_HUMAN (Q8IVE3    ), PKHH2_MOUSE (Q8C115    ), 
PKHH3_HUMAN (Q7Z736    ), PKHH3_MOUSE (Q8VCE9    ), PKHH3_RAT   (Q3B7L1    ), 
PTN13_HUMAN (Q12923    ), PTN13_MOUSE (Q64512    ), TLN2_HUMAN  (Q9Y4G6    ), 
TLN2_MOUSE  (Q71LX4    ), TYK2_HUMAN  (P29597    ), TYK2_MOUSE  (Q9R117    ), 
UN112_DROME (Q9VZI3    ), URP2_BOVIN  (Q32LP0    ), URP2_HUMAN  (Q86UX7    ), 
URP2_MOUSE  (Q8K1B8    ), Y34F_DROME  (Q9W5D0    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 2 sequences 

41_CHICK    (P12264    ), EZRI_MESAU  (P86232    )


				
	

	

		PDB
[Detailed view]		
		
			33 PDB
			


			1E5W; 1EF1; 1GC6; 1GC7; 1GG3; 1H4R; 1ISN; 1J19; 1NI2; 1SGH; 2D10; 2D11; 
			
				2D2Q; 2EMS; 2EMT; 2HE7; 2KC2; 2KMA; 2YVC; 2ZPY; 3BIN; 3IVF; 3QIJ; 3WA0; 
				3X23; 4P7I; 4RM8; 4RM9; 4RMA; 4YL8; 4ZRI; 4ZRJ; 4ZRK
			
			

			» more

				
	





View entry in original PROSITE format


View entry in raw text format (no links)


Direct ScanProsite submission