Entry: PS00660

General information about the entry

Entry name [info] FERM_1
Accession [info] PS00660
Entry type [info] PATTERN
Date [info] JUN-1992 (CREATED); DEC-2002 (DATA UPDATE); MAY-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00566

Name and characterization of the entry

Description [info] FERM domain signature 1.
Pattern [info]
W-[LIV]-x(3)-[KRQ]-x-[LIVM]-x(2)-[QH]-x(0,2)-[LIVMF]-x(6,8)-[LIVMF]-
x(3,5)-F-[FY]-x(2)-[DENS].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_07 which contains 548'872 sequence entries.


Total number of hits 79 in 79 different sequences
Number of true positive hits 79 in 79 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 100
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 44.13 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
79 sequences

41_BOVIN    (Q9N179), 41_CANFA    (Q6Q7P4), 41_HUMAN    (P11171), 
41_MOUSE    (P48193), 41_XENLA    (P11434), E41L1_HUMAN (Q9H4G0), 
E41L1_MOUSE (Q9Z2H5), E41L1_RAT   (Q9WTP0), E41L2_HUMAN (O43491), 
E41L2_MOUSE (O70318), E41L3_HUMAN (Q9Y2J2), E41L3_MOUSE (Q9WV92), 
E41L4_DANRE (O57457), E41L5_BOVIN (Q58CU2), E41L5_CANFA (Q9MYU8), 
E41L5_HUMAN (Q9HCM4), E41L5_MOUSE (Q8BGS1), E41L5_RAT   (Q5FVG2), 
E41LA_HUMAN (Q9HCS5), E41LA_MOUSE (P52963), EZRI_BOVIN  (P31976), 
EZRI_HUMAN  (P15311), EZRI_MOUSE  (P26040), EZRI_RABIT  (Q8HZQ5), 
EZRI_RAT    (P31977), FARP1_CHICK (F1P065), FARP1_HUMAN (Q9Y4F1), 
FARP1_MOUSE (F8VPU2), FARP1_PONAB (Q5RAB8), FARP1_RAT   (F1LYQ8), 
FARP2_HUMAN (O94887), FARP2_MOUSE (Q91VS8), FRM4A_HUMAN (Q9P2Q2), 
FRM4A_MOUSE (Q8BIE6), FRMA_DICDI  (Q54EW0), FRMD3_HUMAN (A2A2Y4), 
FRMD3_MOUSE (Q8BHD4), FRMD3_PONAB (Q5R803), FRMD3_XENTR (Q0P4Q4), 
FRMD5_HUMAN (Q7Z6J6), FRMD5_MOUSE (Q6P5H6), FRMD7_HUMAN (Q6ZUT3), 
FRMD7_MOUSE (A2AD83), MERL_HUMAN  (P35240), MERL_MOUSE  (P46662), 
MERL_PAPAN  (P59750), MERL_RAT    (Q63648), MOEH_AEDAE  (Q170J7), 
MOEH_ANOGA  (Q7PS12), MOEH_CULQU  (B0WYY2), MOEH_DROME  (P46150), 
MOEH_DROPS  (Q29GR8), MOES_BOVIN  (Q2HJ49), MOES_HUMAN  (P26038), 
MOES_LYTVA  (P52962), MOES_MOUSE  (P26041), MOES_PIG    (P26042), 
MOES_RAT    (O35763), PTN14_HUMAN (Q15678), PTN14_MOUSE (Q62130), 
PTN21_HUMAN (Q16825), PTN21_MOUSE (Q62136), PTN21_RAT   (Q62728), 
PTN3_HUMAN  (P26045), PTN4_HUMAN  (P29074), PTN4_MOUSE  (Q9WU22), 
PTP1_CAEEL  (P28191), RADI_BOVIN  (Q32LP2), RADI_CHICK  (Q9PU45), 
RADI_HUMAN  (P35241), RADI_MOUSE  (P26043), RADI_PIG    (P26044), 
TALA1_DICDI (P0CE95), TALA_DICDI  (P0CE94), TALB_DICDI  (Q54K81), 
TLN1_CHICK  (P54939), TLN1_HUMAN  (Q9Y490), TLN1_MOUSE  (P26039), 
UN112_CAEEL (Q18685)
» More

UniProtKB/Swiss-Prot
False negative sequences
100 sequences

41_DROME    (Q9V8R9), E41LB_HUMAN (Q9H329), E41LB_MOUSE (Q9JMC8), 
E41LB_RAT   (B2RYE5), EXPA_DROME  (Q07436), FAK1_CHICK  (Q00944), 
FAK1_HUMAN  (Q05397), FAK1_MOUSE  (P34152), FAK1_RAT    (O35346), 
FAK1_XENLA  (Q91738), FAK2_HUMAN  (Q14289), FAK2_MOUSE  (Q9QVP9), 
FAK2_RAT    (P70600), FERM1_HUMAN (Q9BQL6), FERM1_MOUSE (P59113), 
FERM1_PONAB (Q5R8M5), FERM2_DANRE (F1Q8X5), FERM2_HUMAN (Q96AC1), 
FERM2_MOUSE (Q8CIB5), FR8P1_HUMAN (Q9BZ68), FRM4B_HUMAN (Q9Y2L6), 
FRMB_DICDI  (Q55E74), FRMC_DICDI  (P0CD60), FRMD1_HUMAN (Q8N878), 
FRMD6_HUMAN (Q96NE9), FRMD6_MOUSE (Q8C0V9), FRMD6_RAT   (Q8VII0), 
FRMD8_HUMAN (Q9BZ67), FRMD8_MOUSE (Q3UFK8), FRMD8_RAT   (Q5U2R3), 
FRMD8_XENLA (Q7ZWP1), FRMD8_XENTR (Q0IJ35), FRPD1_HUMAN (Q5SYB0), 
FRPD1_MOUSE (A2AKB4), FRPD2_HUMAN (Q68DX3), FRPD3_HUMAN (Q5JV73), 
FRPD4_HUMAN (Q14CM0), FRPD4_MOUSE (A2AFR3), HUM6_CAEBR  (Q622K8), 
HUM6_CAEEL  (P91443), JAK1_CYPCA  (Q09178), JAK1_DANRE  (O12990), 
JAK1_HUMAN  (P23458), JAK1_MOUSE  (P52332), JAK2_CHICK  (Q75R65), 
JAK2_HUMAN  (O60674), JAK2_MOUSE  (Q62120), JAK2_PIG    (O19064), 
JAK2_PONAB  (Q5RB23), JAK2_RAT    (Q62689), JAK3_HUMAN  (P52333), 
JAK3_MOUSE  (Q62137), JAK3_RAT    (Q63272), JAK_DROME   (Q24592), 
KCBP_ARATH  (Q9FHN8), KCBP_ORYSJ  (Q7XPJ0), KRIT1_BOVIN (Q6TNJ1), 
KRIT1_DANRE (F1REV3), KRIT1_HUMAN (O00522), KRIT1_MOUSE (Q6S5J6), 
MERH_DROME  (Q24564), MYLIA_DANRE (Q6TEM9), MYLIB_DANRE (Q05AK5), 
MYLIP_HUMAN (Q8WY64), MYLIP_MOUSE (Q8BM54), MYLIP_RAT   (D3ZDI6), 
MYO10_BOVIN (P79114), MYO10_HUMAN (Q9HD67), MYO10_MOUSE (F8VQB6), 
MYO10_RAT   (D3ZJP6), MYO15_HUMAN (Q9UKN7), MYO15_MOUSE (Q9QZZ4), 
MYO7A_AEDAE (Q17LW0), MYO7A_DROME (Q9V3Z6), MYO7A_DROPS (Q29P71), 
MYO7A_HUMAN (Q13402), MYO7A_MOUSE (P97479), MYO7B_HUMAN (Q6PIF6), 
MYO7B_MOUSE (Q99MZ6), MYOG_DICDI  (Q86AC8), MYOI_DICDI  (Q9U1M8), 
PKHH1_DANRE (Q00IB7), PKHH1_HUMAN (Q9ULM0), PKHH1_MOUSE (Q80TI1), 
PKHH2_HUMAN (Q8IVE3), PKHH2_MOUSE (Q8C115), PKHH3_HUMAN (Q7Z736), 
PKHH3_MOUSE (Q8VCE9), PKHH3_RAT   (Q3B7L1), PTN13_HUMAN (Q12923), 
PTN13_MOUSE (Q64512), TLN2_HUMAN  (Q9Y4G6), TLN2_MOUSE  (Q71LX4), 
TYK2_HUMAN  (P29597), TYK2_MOUSE  (Q9R117), UN112_DROME (Q9VZI3), 
URP2_BOVIN  (Q32LP0), URP2_HUMAN  (Q86UX7), URP2_MOUSE  (Q8K1B8), 
Y34F_DROME  (Q9W5D0)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

41_CHICK    (P12264), EZRI_MESAU  (P86232)

		
PDB
[Detailed view]
26 PDB

1E5W; 1EF1; 1GC6; 1GC7; 1GG3; 1H4R; 1ISN; 1J19; 1NI2; 1SGH; 2D10; 2D11; 2D2Q; 2EMS; 2EMT; 2HE7; 2KC2; 2KMA; 2YVC; 2ZPY; 3BIN; 3IVF; 3QIJ; 3WA0; 4P7I; 4YL8
» More

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