Entry: PS00660

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General information about the entry

Entry name [info] FERM_1
Accession [info] PS00660
Entry type [info] PATTERN
Date [info] JUN-1992 (CREATED); DEC-2002 (DATA UPDATE); MAR-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00566

Name and characterization of the entry

Description [info] FERM domain signature 1.
Pattern [info] 
W-[LIV]-x(3)-[KRQ]-x-[LIVM]-x(2)-[QH]-x(0,2)-[LIVMF]-x(6,8)-[LIVMF]-
x(3,5)-F-[FY]-x(2)-[DENS].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_04 which contains 544'996 sequence entries.


Total number of hits 79 in 79 different sequences
Number of true positive hits 79 in 79 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 100
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 44.13 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 79 sequences 

41_BOVIN    (Q9N179), 41_CANFA    (Q6Q7P4), 41_HUMAN    (P11171), 

41_MOUSE    (P48193), 41_XENLA    (P11434), E41L1_HUMAN (Q9H4G0), 
E41L1_MOUSE (Q9Z2H5), E41L1_RAT   (Q9WTP0), E41L2_HUMAN (O43491), 
E41L2_MOUSE (O70318), E41L3_HUMAN (Q9Y2J2), E41L3_MOUSE (Q9WV92), 
E41L4_DANRE (O57457), E41L5_BOVIN (Q58CU2), E41L5_CANFA (Q9MYU8), 
E41L5_HUMAN (Q9HCM4), E41L5_MOUSE (Q8BGS1), E41L5_RAT   (Q5FVG2), 
E41LA_HUMAN (Q9HCS5), E41LA_MOUSE (P52963), EZRI_BOVIN  (P31976), 
EZRI_HUMAN  (P15311), EZRI_MOUSE  (P26040), EZRI_RABIT  (Q8HZQ5), 
EZRI_RAT    (P31977), FARP1_CHICK (F1P065), FARP1_HUMAN (Q9Y4F1), 
FARP1_MOUSE (F8VPU2), FARP1_PONAB (Q5RAB8), FARP1_RAT   (F1LYQ8), 
FARP2_HUMAN (O94887), FARP2_MOUSE (Q91VS8), FRM4A_HUMAN (Q9P2Q2), 
FRM4A_MOUSE (Q8BIE6), FRMA_DICDI  (Q54EW0), FRMD3_HUMAN (A2A2Y4), 
FRMD3_MOUSE (Q8BHD4), FRMD3_PONAB (Q5R803), FRMD3_XENTR (Q0P4Q4), 
FRMD5_HUMAN (Q7Z6J6), FRMD5_MOUSE (Q6P5H6), FRMD7_HUMAN (Q6ZUT3), 
FRMD7_MOUSE (A2AD83), MERL_HUMAN  (P35240), MERL_MOUSE  (P46662), 
MERL_PAPAN  (P59750), MERL_RAT    (Q63648), MOEH_AEDAE  (Q170J7), 
MOEH_ANOGA  (Q7PS12), MOEH_CULQU  (B0WYY2), MOEH_DROME  (P46150), 
MOEH_DROPS  (Q29GR8), MOES_BOVIN  (Q2HJ49), MOES_HUMAN  (P26038), 
MOES_LYTVA  (P52962), MOES_MOUSE  (P26041), MOES_PIG    (P26042), 
MOES_RAT    (O35763), PTN14_HUMAN (Q15678), PTN14_MOUSE (Q62130), 
PTN21_HUMAN (Q16825), PTN21_MOUSE (Q62136), PTN21_RAT   (Q62728), 
PTN3_HUMAN  (P26045), PTN4_HUMAN  (P29074), PTN4_MOUSE  (Q9WU22), 
PTP1_CAEEL  (P28191), RADI_BOVIN  (Q32LP2), RADI_CHICK  (Q9PU45), 
RADI_HUMAN  (P35241), RADI_MOUSE  (P26043), RADI_PIG    (P26044), 
TALA1_DICDI (P0CE95), TALA_DICDI  (P0CE94), TALB_DICDI  (Q54K81), 
TLN1_CHICK  (P54939), TLN1_HUMAN  (Q9Y490), TLN1_MOUSE  (P26039), 
UN112_CAEEL (Q18685)
» More

UniProtKB/Swiss-Prot
False negative sequences		 100 sequences 

41_DROME    (Q9V8R9), E41LB_HUMAN (Q9H329), E41LB_MOUSE (Q9JMC8), 

E41LB_RAT   (B2RYE5), EXPA_DROME  (Q07436), FAK1_CHICK  (Q00944), 
FAK1_HUMAN  (Q05397), FAK1_MOUSE  (P34152), FAK1_RAT    (O35346), 
FAK1_XENLA  (Q91738), FAK2_HUMAN  (Q14289), FAK2_MOUSE  (Q9QVP9), 
FAK2_RAT    (P70600), FERM1_HUMAN (Q9BQL6), FERM1_MOUSE (P59113), 
FERM1_PONAB (Q5R8M5), FERM2_DANRE (F1Q8X5), FERM2_HUMAN (Q96AC1), 
FERM2_MOUSE (Q8CIB5), FR8P1_HUMAN (Q9BZ68), FRM4B_HUMAN (Q9Y2L6), 
FRMB_DICDI  (Q55E74), FRMC_DICDI  (P0CD60), FRMD1_HUMAN (Q8N878), 
FRMD6_HUMAN (Q96NE9), FRMD6_MOUSE (Q8C0V9), FRMD6_RAT   (Q8VII0), 
FRMD8_HUMAN (Q9BZ67), FRMD8_MOUSE (Q3UFK8), FRMD8_RAT   (Q5U2R3), 
FRMD8_XENLA (Q7ZWP1), FRMD8_XENTR (Q0IJ35), FRPD1_HUMAN (Q5SYB0), 
FRPD1_MOUSE (A2AKB4), FRPD2_HUMAN (Q68DX3), FRPD3_HUMAN (Q5JV73), 
FRPD4_HUMAN (Q14CM0), FRPD4_MOUSE (A2AFR3), HUM6_CAEBR  (Q622K8), 
HUM6_CAEEL  (P91443), JAK1_CYPCA  (Q09178), JAK1_DANRE  (O12990), 
JAK1_HUMAN  (P23458), JAK1_MOUSE  (P52332), JAK2_CHICK  (Q75R65), 
JAK2_HUMAN  (O60674), JAK2_MOUSE  (Q62120), JAK2_PIG    (O19064), 
JAK2_PONAB  (Q5RB23), JAK2_RAT    (Q62689), JAK3_HUMAN  (P52333), 
JAK3_MOUSE  (Q62137), JAK3_RAT    (Q63272), JAK_DROME   (Q24592), 
KCBP_ARATH  (Q9FHN8), KCBP_ORYSJ  (Q7XPJ0), KRIT1_BOVIN (Q6TNJ1), 
KRIT1_DANRE (F1REV3), KRIT1_HUMAN (O00522), KRIT1_MOUSE (Q6S5J6), 
MERH_DROME  (Q24564), MYLIA_DANRE (Q6TEM9), MYLIB_DANRE (Q05AK5), 
MYLIP_HUMAN (Q8WY64), MYLIP_MOUSE (Q8BM54), MYLIP_RAT   (D3ZDI6), 
MYO10_BOVIN (P79114), MYO10_HUMAN (Q9HD67), MYO10_MOUSE (F8VQB6), 
MYO10_RAT   (D3ZJP6), MYO15_HUMAN (Q9UKN7), MYO15_MOUSE (Q9QZZ4), 
MYO7A_AEDAE (Q17LW0), MYO7A_DROME (Q9V3Z6), MYO7A_DROPS (Q29P71), 
MYO7A_HUMAN (Q13402), MYO7A_MOUSE (P97479), MYO7B_HUMAN (Q6PIF6), 
MYO7B_MOUSE (Q99MZ6), MYOG_DICDI  (Q86AC8), MYOI_DICDI  (Q9U1M8), 
PKHH1_DANRE (Q00IB7), PKHH1_HUMAN (Q9ULM0), PKHH1_MOUSE (Q80TI1), 
PKHH2_HUMAN (Q8IVE3), PKHH2_MOUSE (Q8C115), PKHH3_HUMAN (Q7Z736), 
PKHH3_MOUSE (Q8VCE9), PKHH3_RAT   (Q3B7L1), PTN13_HUMAN (Q12923), 
PTN13_MOUSE (Q64512), TLN2_HUMAN  (Q9Y4G6), TLN2_MOUSE  (Q71LX4), 
TYK2_HUMAN  (P29597), TYK2_MOUSE  (Q9R117), UN112_DROME (Q9VZI3), 
URP2_BOVIN  (Q32LP0), URP2_HUMAN  (Q86UX7), URP2_MOUSE  (Q8K1B8), 
Y34F_DROME  (Q9W5D0)
» More

UniProtKB/Swiss-Prot
'Partial' sequences		 2 sequences 

41_CHICK    (P12264), EZRI_MESAU  (P86232)


				
	

	

		PDB
[Detailed view]		
		
			23 PDB
			


			1E5W; 1EF1; 1GC6; 1GC7; 1GG3; 1H4R; 1ISN; 1J19; 1NI2; 1SGH; 2D10; 2D11; 
			
				2D2Q; 2EMS; 2EMT; 2HE7; 2KC2; 2KMA; 2YVC; 2ZPY; 3BIN; 3IVF; 3QIJ
			
			

			» More

				
	





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