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| Entry: PS00660 |
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| General information about the entry | |
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| Entry name [?] | FERM_1 |
| Accession number [?] | PS00660 |
| Entry type [?] | PATTERN |
| Date [?] | JUN-1992 (CREATED); DEC-2002 (DATA UPDATE); OCT-2013 (INFO UPDATE). |
| PROSITE Documentation [?] | PDOC00566 |
| Name and characterization of the entry | |
| Description [?] | FERM domain signature 1. |
| Pattern [?] | W-[LIV]-x(3)-[KRQ]-x-[LIVM]-x(2)-[QH]-x(0,2)-[LIVMF]-x(6,8)-[LIVMF]- x(3,5)-F-[FY]-x(2)-[DENS]. |
| Numerical results [?] | |
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| Comments [?] | |
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| Cross-references [?] | |
| UniProtKB/Swiss-Prot | True positive hits:
41_BOVIN (Q9N179), 41_CANFA (Q6Q7P4), 41_HUMAN (P11171), 41_MOUSE (P48193), 41_XENLA (P11434), E41L1_HUMAN (Q9H4G0), E41L1_MOUSE (Q9Z2H5), E41L1_RAT (Q9WTP0), E41L2_HUMAN (O43491), E41L2_MOUSE (O70318), E41L3_HUMAN (Q9Y2J2), E41L3_MOUSE (Q9WV92), E41L4_DANRE (O57457), E41L5_BOVIN (Q58CU2), E41L5_CANFA (Q9MYU8), E41L5_HUMAN (Q9HCM4), E41L5_MOUSE (Q8BGS1), E41L5_RAT (Q5FVG2), E41LA_HUMAN (Q9HCS5), E41LA_MOUSE (P52963), EZRI_BOVIN (P31976), EZRI_HUMAN (P15311), EZRI_MOUSE (P26040), EZRI_RABIT (Q8HZQ5), EZRI_RAT (P31977), FARP1_CHICK (F1P065), FARP1_HUMAN (Q9Y4F1), FARP1_MOUSE (F8VPU2), FARP1_PONAB (Q5RAB8), FARP1_RAT (F1LYQ8), FARP2_HUMAN (O94887), FARP2_MOUSE (Q91VS8), FRM4A_HUMAN (Q9P2Q2), FRM4A_MOUSE (Q8BIE6), FRMA_DICDI (Q54EW0), FRMD3_HUMAN (A2A2Y4), FRMD3_MOUSE (Q8BHD4), FRMD3_PONAB (Q5R803), FRMD3_XENTR (Q0P4Q4), FRMD5_HUMAN (Q7Z6J6), FRMD5_MOUSE (Q6P5H6), FRMD7_HUMAN (Q6ZUT3), FRMD7_MOUSE (A2AD83), MERL_HUMAN (P35240), MERL_MOUSE (P46662), MERL_PAPAN (P59750), MERL_RAT (Q63648), MOEH_AEDAE (Q170J7), MOEH_ANOGA (Q7PS12), MOEH_CULQU (B0WYY2), MOEH_DROME (P46150), MOEH_DROPS (Q29GR8), MOES_BOVIN (Q2HJ49), MOES_HUMAN (P26038), MOES_LYTVA (P52962), MOES_MOUSE (P26041), MOES_PIG (P26042), MOES_RAT (O35763), PTN14_HUMAN (Q15678), PTN14_MOUSE (Q62130), PTN21_HUMAN (Q16825), PTN21_MOUSE (Q62136), PTN21_RAT (Q62728), PTN3_HUMAN (P26045), PTN4_HUMAN (P29074), PTN4_MOUSE (Q9WU22), PTP1_CAEEL (P28191), RADI_BOVIN (Q32LP2), RADI_CHICK (Q9PU45), RADI_HUMAN (P35241), RADI_MOUSE (P26043), RADI_PIG (P26044), TALA1_DICDI (P0CE95), TALA_DICDI (P0CE94), TALB_DICDI (Q54K81), TLN1_CHICK (P54939), TLN1_HUMAN (Q9Y490), TLN1_MOUSE (P26039), UN112_CAEEL (Q18685)False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile): 41_DROME (Q9V8R9), E41LB_HUMAN (Q9H329), E41LB_MOUSE (Q9JMC8), E41LB_RAT (B2RYE5), EXPA_DROME (Q07436), FAK1_CHICK (Q00944), FAK1_HUMAN (Q05397), FAK1_MOUSE (P34152), FAK1_RAT (O35346), FAK1_XENLA (Q91738), FAK2_HUMAN (Q14289), FAK2_MOUSE (Q9QVP9), FAK2_RAT (P70600), FERM1_HUMAN (Q9BQL6), FERM1_MOUSE (P59113), FERM1_PONAB (Q5R8M5), FERM2_DANRE (F1Q8X5), FERM2_HUMAN (Q96AC1), FERM2_MOUSE (Q8CIB5), FR8P1_HUMAN (Q9BZ68), FRM4B_HUMAN (Q9Y2L6), FRMB_DICDI (Q55E74), FRMC_DICDI (P0CD60), FRMD1_HUMAN (Q8N878), FRMD6_HUMAN (Q96NE9), FRMD6_MOUSE (Q8C0V9), FRMD6_RAT (Q8VII0), FRMD8_HUMAN (Q9BZ67), FRMD8_MOUSE (Q3UFK8), FRMD8_RAT (Q5U2R3), FRMD8_XENLA (Q7ZWP1), FRMD8_XENTR (Q0IJ35), FRPD1_HUMAN (Q5SYB0), FRPD1_MOUSE (A2AKB4), FRPD2_HUMAN (Q68DX3), FRPD3_HUMAN (Q5JV73), FRPD4_HUMAN (Q14CM0), FRPD4_MOUSE (A2AFR3), HUM6_CAEBR (Q622K8), HUM6_CAEEL (P91443), JAK1_CYPCA (Q09178), JAK1_DANRE (O12990), JAK1_HUMAN (P23458), JAK1_MOUSE (P52332), JAK2_CHICK (Q75R65), JAK2_HUMAN (O60674), JAK2_MOUSE (Q62120), JAK2_PIG (O19064), JAK2_PONAB (Q5RB23), JAK2_RAT (Q62689), JAK3_HUMAN (P52333), JAK3_MOUSE (Q62137), JAK3_RAT (Q63272), JAK_DROME (Q24592), KCBP_ARATH (Q9FHN8), KCBP_ORYSJ (Q7XPJ0), KRIT1_BOVIN (Q6TNJ1), KRIT1_DANRE (F1REV3), KRIT1_HUMAN (O00522), KRIT1_MOUSE (Q6S5J6), MERH_DROME (Q24564), MYLIA_DANRE (Q6TEM9), MYLIB_DANRE (Q05AK5), MYLIP_HUMAN (Q8WY64), MYLIP_MOUSE (Q8BM54), MYLIP_RAT (D3ZDI6), MYO10_BOVIN (P79114), MYO10_HUMAN (Q9HD67), MYO10_MOUSE (F8VQB6), MYO10_RAT (D3ZJP6), MYO15_HUMAN (Q9UKN7), MYO15_MOUSE (Q9QZZ4), MYO7A_AEDAE (Q17LW0), MYO7A_DROME (Q9V3Z6), MYO7A_DROPS (Q29P71), MYO7A_HUMAN (Q13402), MYO7A_MOUSE (P97479), MYO7B_HUMAN (Q6PIF6), MYO7B_MOUSE (Q99MZ6), MYOG_DICDI (Q86AC8), MYOI_DICDI (Q9U1M8), PKHH1_DANRE (Q00IB7), PKHH1_HUMAN (Q9ULM0), PKHH1_MOUSE (Q80TI1), PKHH2_HUMAN (Q8IVE3), PKHH2_MOUSE (Q8C115), PKHH3_HUMAN (Q7Z736), PKHH3_MOUSE (Q8VCE9), PKHH3_RAT (Q3B7L1), PTN13_HUMAN (Q12923), PTN13_MOUSE (Q64512), TLN2_HUMAN (Q9Y4G6), TLN2_MOUSE (Q71LX4), TYK2_HUMAN (P29597), TYK2_MOUSE (Q9R117), UN112_DROME (Q9VZI3), URP2_BOVIN (Q32LP0), URP2_HUMAN (Q86UX7), URP2_MOUSE (Q8K1B8), Y34F_DROME (Q9W5D0)'Partial' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences): 41_CHICK (P12264), EZRI_MESAU (P86232)Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view]
[Clustal format, color]
[Clustal format, plain text]
[Fasta format]
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| PDB [Detailed view] |
1E5W; 1EF1; 1GC6; 1GC7; 1GG3; 1H4R; 1ISN; 1J19; 1NI2; 1SGH; 2D10; 2D11; 2D2Q; 2EMS; 2EMT; 2HE7; 2KC2; 2KMA; 2YVC; 2ZPY; 3BIN; 3IVF; 3QIJ; |
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