Entry: PS00660

General information about the entry

Entry name [info] FERM_1
Accession [info] PS00660
Entry type [info] PATTERN
Date [info] JUN-1992 (CREATED); DEC-2002 (DATA UPDATE); JUN-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00566

Name and characterization of the entry

Description [info] FERM domain signature 1.
Pattern [info] 
W-[LIV]-x(3)-[KRQ]-x-[LIVM]-x(2)-[QH]-x(0,2)-[LIVMF]-x(6,8)-[LIVMF]-
x(3,5)-F-[FY]-x(2)-[DENS].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_08 which contains 551'987 sequence entries.


Total number of hits 79 in 79 different sequences
Number of true positive hits 79 in 79 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 101
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 43.89 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 79 sequences 

41_BOVIN    (Q9N179    ), 41_CANLF    (Q6Q7P4    ), 41_HUMAN    (P11171    ), 

41_MOUSE    (P48193    ), 41_XENLA    (P11434    ), E41L1_HUMAN (Q9H4G0    ), 
E41L1_MOUSE (Q9Z2H5    ), E41L1_RAT   (Q9WTP0    ), E41L2_HUMAN (O43491    ), 
E41L2_MOUSE (O70318    ), E41L3_HUMAN (Q9Y2J2    ), E41L3_MOUSE (Q9WV92    ), 
E41L4_DANRE (O57457    ), E41L5_BOVIN (Q58CU2    ), E41L5_CANLF (Q9MYU8    ), 
E41L5_HUMAN (Q9HCM4    ), E41L5_MOUSE (Q8BGS1    ), E41L5_RAT   (Q5FVG2    ), 
E41LA_HUMAN (Q9HCS5    ), E41LA_MOUSE (P52963    ), EZRI_BOVIN  (P31976    ), 
EZRI_HUMAN  (P15311    ), EZRI_MOUSE  (P26040    ), EZRI_RABIT  (Q8HZQ5    ), 
EZRI_RAT    (P31977    ), FARP1_CHICK (F1P065    ), FARP1_HUMAN (Q9Y4F1    ), 
FARP1_MOUSE (F8VPU2    ), FARP1_PONAB (Q5RAB8    ), FARP1_RAT   (F1LYQ8    ), 
FARP2_HUMAN (O94887    ), FARP2_MOUSE (Q91VS8    ), FRM4A_HUMAN (Q9P2Q2    ), 
FRM4A_MOUSE (Q8BIE6    ), FRMA_DICDI  (Q54EW0    ), FRMD3_HUMAN (A2A2Y4    ), 
FRMD3_MOUSE (Q8BHD4    ), FRMD3_PONAB (Q5R803    ), FRMD3_XENTR (Q0P4Q4    ), 
FRMD5_HUMAN (Q7Z6J6    ), FRMD5_MOUSE (Q6P5H6    ), FRMD7_HUMAN (Q6ZUT3    ), 
FRMD7_MOUSE (A2AD83    ), MERL_HUMAN  (P35240    ), MERL_MOUSE  (P46662    ), 
MERL_PAPAN  (P59750    ), MERL_RAT    (Q63648    ), MOEH_AEDAE  (Q170J7    ), 
MOEH_ANOGA  (Q7PS12    ), MOEH_CULQU  (B0WYY2    ), MOEH_DROME  (P46150    ), 
MOEH_DROPS  (Q29GR8    ), MOES_BOVIN  (Q2HJ49    ), MOES_HUMAN  (P26038    ), 
MOES_LYTVA  (P52962    ), MOES_MOUSE  (P26041    ), MOES_PIG    (P26042    ), 
MOES_RAT    (O35763    ), PTN14_HUMAN (Q15678    ), PTN14_MOUSE (Q62130    ), 
PTN21_HUMAN (Q16825    ), PTN21_MOUSE (Q62136    ), PTN21_RAT   (Q62728    ), 
PTN3_HUMAN  (P26045    ), PTN4_HUMAN  (P29074    ), PTN4_MOUSE  (Q9WU22    ), 
PTP1_CAEEL  (P28191    ), RADI_BOVIN  (Q32LP2    ), RADI_CHICK  (Q9PU45    ), 
RADI_HUMAN  (P35241    ), RADI_MOUSE  (P26043    ), RADI_PIG    (P26044    ), 
TALA1_DICDI (P0CE95    ), TALA_DICDI  (P0CE94    ), TALB_DICDI  (Q54K81    ), 
TLN1_CHICK  (P54939    ), TLN1_HUMAN  (Q9Y490    ), TLN1_MOUSE  (P26039    ), 
UN112_CAEEL (Q18685    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 101 sequences 

41_DROME    (Q9V8R9    ), E41LB_HUMAN (Q9H329    ), E41LB_MOUSE (Q9JMC8    ), 

E41LB_RAT   (B2RYE5    ), EXPA_DROME  (Q07436    ), FAK1_CHICK  (Q00944    ), 
FAK1_HUMAN  (Q05397    ), FAK1_MOUSE  (P34152    ), FAK1_RAT    (O35346    ), 
FAK1_XENLA  (Q91738    ), FAK2_HUMAN  (Q14289    ), FAK2_MOUSE  (Q9QVP9    ), 
FAK2_RAT    (P70600    ), FERM1_HUMAN (Q9BQL6    ), FERM1_MOUSE (P59113    ), 
FERM1_PONAB (Q5R8M5    ), FERM2_DANRE (F1Q8X5    ), FERM2_HUMAN (Q96AC1    ), 
FERM2_MOUSE (Q8CIB5    ), FR8P1_HUMAN (Q9BZ68    ), FRM4B_HUMAN (Q9Y2L6    ), 
FRMB_DICDI  (Q55E74    ), FRMC_DICDI  (P0CD60    ), FRMD1_HUMAN (Q8N878    ), 
FRMD6_HUMAN (Q96NE9    ), FRMD6_MOUSE (Q8C0V9    ), FRMD6_RAT   (Q8VII0    ), 
FRMD8_HUMAN (Q9BZ67    ), FRMD8_MOUSE (Q3UFK8    ), FRMD8_RAT   (Q5U2R3    ), 
FRMD8_XENLA (Q7ZWP1    ), FRMD8_XENTR (Q0IJ35    ), FRPD1_HUMAN (Q5SYB0    ), 
FRPD1_MOUSE (A2AKB4    ), FRPD2_HUMAN (Q68DX3    ), FRPD3_HUMAN (Q5JV73    ), 
FRPD4_HUMAN (Q14CM0    ), FRPD4_MOUSE (A2AFR3    ), HUM6_CAEBR  (Q622K8    ), 
HUM6_CAEEL  (P91443    ), JAK1_CYPCA  (Q09178    ), JAK1_DANRE  (O12990    ), 
JAK1_HUMAN  (P23458    ), JAK1_MOUSE  (P52332    ), JAK2_CHICK  (Q75R65    ), 
JAK2_HUMAN  (O60674    ), JAK2_MOUSE  (Q62120    ), JAK2_PIG    (O19064    ), 
JAK2_PONAB  (Q5RB23    ), JAK2_RAT    (Q62689    ), JAK3_HUMAN  (P52333    ), 
JAK3_MOUSE  (Q62137    ), JAK3_RAT    (Q63272    ), JAK_DROME   (Q24592    ), 
KCBP_ARATH  (Q9FHN8    ), KCBP_ORYSJ  (Q7XPJ0    ), KIN32_CAEEL (Q95YD4    ), 
KRIT1_BOVIN (Q6TNJ1    ), KRIT1_DANRE (F1REV3    ), KRIT1_HUMAN (O00522    ), 
KRIT1_MOUSE (Q6S5J6    ), MERH_DROME  (Q24564    ), MYLIA_DANRE (Q6TEM9    ), 
MYLIB_DANRE (Q05AK5    ), MYLIP_HUMAN (Q8WY64    ), MYLIP_MOUSE (Q8BM54    ), 
MYLIP_RAT   (D3ZDI6    ), MYO10_BOVIN (P79114    ), MYO10_HUMAN (Q9HD67    ), 
MYO10_MOUSE (F8VQB6    ), MYO10_RAT   (D3ZJP6    ), MYO15_HUMAN (Q9UKN7    ), 
MYO15_MOUSE (Q9QZZ4    ), MYO7A_AEDAE (Q17LW0    ), MYO7A_DROME (Q9V3Z6    ), 
MYO7A_DROPS (Q29P71    ), MYO7A_HUMAN (Q13402    ), MYO7A_MOUSE (P97479    ), 
MYO7B_HUMAN (Q6PIF6    ), MYO7B_MOUSE (Q99MZ6    ), MYOG_DICDI  (Q86AC8    ), 
MYOI_DICDI  (Q9U1M8    ), PKHH1_DANRE (Q00IB7    ), PKHH1_HUMAN (Q9ULM0    ), 
PKHH1_MOUSE (Q80TI1    ), PKHH2_HUMAN (Q8IVE3    ), PKHH2_MOUSE (Q8C115    ), 
PKHH3_HUMAN (Q7Z736    ), PKHH3_MOUSE (Q8VCE9    ), PKHH3_RAT   (Q3B7L1    ), 
PTN13_HUMAN (Q12923    ), PTN13_MOUSE (Q64512    ), TLN2_HUMAN  (Q9Y4G6    ), 
TLN2_MOUSE  (Q71LX4    ), TYK2_HUMAN  (P29597    ), TYK2_MOUSE  (Q9R117    ), 
UN112_DROME (Q9VZI3    ), URP2_BOVIN  (Q32LP0    ), URP2_HUMAN  (Q86UX7    ), 
URP2_MOUSE  (Q8K1B8    ), Y34F_DROME  (Q9W5D0    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 2 sequences 

41_CHICK    (P12264    ), EZRI_MESAU  (P86232    )


				
	

	

		PDB
[Detailed view]		
		
			33 PDB
			


			1E5W; 1EF1; 1GC6; 1GC7; 1GG3; 1H4R; 1ISN; 1J19; 1NI2; 1SGH; 2D10; 2D11; 
			
				2D2Q; 2EMS; 2EMT; 2HE7; 2KC2; 2KMA; 2YVC; 2ZPY; 3BIN; 3IVF; 3QIJ; 3WA0; 
				3X23; 4P7I; 4RM8; 4RM9; 4RMA; 4YL8; 4ZRI; 4ZRJ; 4ZRK
			
			

			» more

				
	





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