Entry: PS00660

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General information about the entry

Entry name [info] FERM_1
Accession [info] PS00660
Entry type [info] PATTERN
Date [info] JUN-1992 (CREATED); DEC-2002 (DATA UPDATE); JUL-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00566

Name and characterization of the entry

Description [info] FERM domain signature 1.
Pattern [info]
W-[LIV]-x(3)-[KRQ]-x-[LIVM]-x(2)-[QH]-x(0,2)-[LIVMF]-x(6,8)-[LIVMF]-
x(3,5)-F-[FY]-x(2)-[DENS].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_08 which contains 546'238 sequence entries.


Total number of hits 79 in 79 different sequences
Number of true positive hits 79 in 79 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 100
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 44.13 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
79 sequences

41_BOVIN    (Q9N179), 41_CANFA    (Q6Q7P4), 41_HUMAN    (P11171), 
41_MOUSE    (P48193), 41_XENLA    (P11434), E41L1_HUMAN (Q9H4G0), 
E41L1_MOUSE (Q9Z2H5), E41L1_RAT   (Q9WTP0), E41L2_HUMAN (O43491), 
E41L2_MOUSE (O70318), E41L3_HUMAN (Q9Y2J2), E41L3_MOUSE (Q9WV92), 
E41L4_DANRE (O57457), E41L5_BOVIN (Q58CU2), E41L5_CANFA (Q9MYU8), 
E41L5_HUMAN (Q9HCM4), E41L5_MOUSE (Q8BGS1), E41L5_RAT   (Q5FVG2), 
E41LA_HUMAN (Q9HCS5), E41LA_MOUSE (P52963), EZRI_BOVIN  (P31976), 
EZRI_HUMAN  (P15311), EZRI_MOUSE  (P26040), EZRI_RABIT  (Q8HZQ5), 
EZRI_RAT    (P31977), FARP1_CHICK (F1P065), FARP1_HUMAN (Q9Y4F1), 
FARP1_MOUSE (F8VPU2), FARP1_PONAB (Q5RAB8), FARP1_RAT   (F1LYQ8), 
FARP2_HUMAN (O94887), FARP2_MOUSE (Q91VS8), FRM4A_HUMAN (Q9P2Q2), 
FRM4A_MOUSE (Q8BIE6), FRMA_DICDI  (Q54EW0), FRMD3_HUMAN (A2A2Y4), 
FRMD3_MOUSE (Q8BHD4), FRMD3_PONAB (Q5R803), FRMD3_XENTR (Q0P4Q4), 
FRMD5_HUMAN (Q7Z6J6), FRMD5_MOUSE (Q6P5H6), FRMD7_HUMAN (Q6ZUT3), 
FRMD7_MOUSE (A2AD83), MERL_HUMAN  (P35240), MERL_MOUSE  (P46662), 
MERL_PAPAN  (P59750), MERL_RAT    (Q63648), MOEH_AEDAE  (Q170J7), 
MOEH_ANOGA  (Q7PS12), MOEH_CULQU  (B0WYY2), MOEH_DROME  (P46150), 
MOEH_DROPS  (Q29GR8), MOES_BOVIN  (Q2HJ49), MOES_HUMAN  (P26038), 
MOES_LYTVA  (P52962), MOES_MOUSE  (P26041), MOES_PIG    (P26042), 
MOES_RAT    (O35763), PTN14_HUMAN (Q15678), PTN14_MOUSE (Q62130), 
PTN21_HUMAN (Q16825), PTN21_MOUSE (Q62136), PTN21_RAT   (Q62728), 
PTN3_HUMAN  (P26045), PTN4_HUMAN  (P29074), PTN4_MOUSE  (Q9WU22), 
PTP1_CAEEL  (P28191), RADI_BOVIN  (Q32LP2), RADI_CHICK  (Q9PU45), 
RADI_HUMAN  (P35241), RADI_MOUSE  (P26043), RADI_PIG    (P26044), 
TALA1_DICDI (P0CE95), TALA_DICDI  (P0CE94), TALB_DICDI  (Q54K81), 
TLN1_CHICK  (P54939), TLN1_HUMAN  (Q9Y490), TLN1_MOUSE  (P26039), 
UN112_CAEEL (Q18685)
» More

UniProtKB/Swiss-Prot
False negative sequences
100 sequences

41_DROME    (Q9V8R9), E41LB_HUMAN (Q9H329), E41LB_MOUSE (Q9JMC8), 
E41LB_RAT   (B2RYE5), EXPA_DROME  (Q07436), FAK1_CHICK  (Q00944), 
FAK1_HUMAN  (Q05397), FAK1_MOUSE  (P34152), FAK1_RAT    (O35346), 
FAK1_XENLA  (Q91738), FAK2_HUMAN  (Q14289), FAK2_MOUSE  (Q9QVP9), 
FAK2_RAT    (P70600), FERM1_HUMAN (Q9BQL6), FERM1_MOUSE (P59113), 
FERM1_PONAB (Q5R8M5), FERM2_DANRE (F1Q8X5), FERM2_HUMAN (Q96AC1), 
FERM2_MOUSE (Q8CIB5), FR8P1_HUMAN (Q9BZ68), FRM4B_HUMAN (Q9Y2L6), 
FRMB_DICDI  (Q55E74), FRMC_DICDI  (P0CD60), FRMD1_HUMAN (Q8N878), 
FRMD6_HUMAN (Q96NE9), FRMD6_MOUSE (Q8C0V9), FRMD6_RAT   (Q8VII0), 
FRMD8_HUMAN (Q9BZ67), FRMD8_MOUSE (Q3UFK8), FRMD8_RAT   (Q5U2R3), 
FRMD8_XENLA (Q7ZWP1), FRMD8_XENTR (Q0IJ35), FRPD1_HUMAN (Q5SYB0), 
FRPD1_MOUSE (A2AKB4), FRPD2_HUMAN (Q68DX3), FRPD3_HUMAN (Q5JV73), 
FRPD4_HUMAN (Q14CM0), FRPD4_MOUSE (A2AFR3), HUM6_CAEBR  (Q622K8), 
HUM6_CAEEL  (P91443), JAK1_CYPCA  (Q09178), JAK1_DANRE  (O12990), 
JAK1_HUMAN  (P23458), JAK1_MOUSE  (P52332), JAK2_CHICK  (Q75R65), 
JAK2_HUMAN  (O60674), JAK2_MOUSE  (Q62120), JAK2_PIG    (O19064), 
JAK2_PONAB  (Q5RB23), JAK2_RAT    (Q62689), JAK3_HUMAN  (P52333), 
JAK3_MOUSE  (Q62137), JAK3_RAT    (Q63272), JAK_DROME   (Q24592), 
KCBP_ARATH  (Q9FHN8), KCBP_ORYSJ  (Q7XPJ0), KRIT1_BOVIN (Q6TNJ1), 
KRIT1_DANRE (F1REV3), KRIT1_HUMAN (O00522), KRIT1_MOUSE (Q6S5J6), 
MERH_DROME  (Q24564), MYLIA_DANRE (Q6TEM9), MYLIB_DANRE (Q05AK5), 
MYLIP_HUMAN (Q8WY64), MYLIP_MOUSE (Q8BM54), MYLIP_RAT   (D3ZDI6), 
MYO10_BOVIN (P79114), MYO10_HUMAN (Q9HD67), MYO10_MOUSE (F8VQB6), 
MYO10_RAT   (D3ZJP6), MYO15_HUMAN (Q9UKN7), MYO15_MOUSE (Q9QZZ4), 
MYO7A_AEDAE (Q17LW0), MYO7A_DROME (Q9V3Z6), MYO7A_DROPS (Q29P71), 
MYO7A_HUMAN (Q13402), MYO7A_MOUSE (P97479), MYO7B_HUMAN (Q6PIF6), 
MYO7B_MOUSE (Q99MZ6), MYOG_DICDI  (Q86AC8), MYOI_DICDI  (Q9U1M8), 
PKHH1_DANRE (Q00IB7), PKHH1_HUMAN (Q9ULM0), PKHH1_MOUSE (Q80TI1), 
PKHH2_HUMAN (Q8IVE3), PKHH2_MOUSE (Q8C115), PKHH3_HUMAN (Q7Z736), 
PKHH3_MOUSE (Q8VCE9), PKHH3_RAT   (Q3B7L1), PTN13_HUMAN (Q12923), 
PTN13_MOUSE (Q64512), TLN2_HUMAN  (Q9Y4G6), TLN2_MOUSE  (Q71LX4), 
TYK2_HUMAN  (P29597), TYK2_MOUSE  (Q9R117), UN112_DROME (Q9VZI3), 
URP2_BOVIN  (Q32LP0), URP2_HUMAN  (Q86UX7), URP2_MOUSE  (Q8K1B8), 
Y34F_DROME  (Q9W5D0)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

41_CHICK    (P12264), EZRI_MESAU  (P86232)

		
PDB
[Detailed view]
25 PDB

1E5W; 1EF1; 1GC6; 1GC7; 1GG3; 1H4R; 1ISN; 1J19; 1NI2; 1SGH; 2D10; 2D11; 2D2Q; 2EMS; 2EMT; 2HE7; 2KC2; 2KMA; 2YVC; 2ZPY; 3BIN; 3IVF; 3QIJ; 3WA0; 4P7I
» More

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