PROSITE entry PS00669
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General information about the entry
Entry name [info] | GAS_VESICLE_A_2 |
Accession [info] | PS00669 |
Entry type [info] | PATTERN |
Date [info] |
01-JUN-1992 CREATED;
01-DEC-2004 DATA UPDATE; 27-MAR-2024 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00207 |
Name and characterization of the entry
Description [info] | Gas vesicles protein GVPa signature 2. |
Pattern [info] |
R-[LIVA](3)-A-[GS]-[LIVMFY]-x-[TK]-x(3)-[YFI]-[AG]. |
Numerical results [info]
Total number of hits | 40 in 40 different sequences |
Number of true positive hits | 40 in 40 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 7 |
Number of 'partial' sequences | 1 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 85.11 % |
Comments [info]
Taxonomic range [info] | Archaea, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
40 sequences
GVPA1_HALSA (P08958), GVPA1_PRIMG (O68680), GVPA1_STRCO (Q9ZC13), GVPA2_HALSA (P08959), GVPA2_PRIMG (O68677), GVPA2_STRCO (Q9RJB4), GVPA_ANCAQ (Q9RH31), GVPA_BRASO (A4YMQ7), GVPA_CERS1 (A3PPT5), GVPA_CERS4 (Q3IWB1), GVPA_CERSK (B9KU72), GVPA_DOLFA (P10397), GVPA_GEOUR (A5G5E4), GVPA_HALMT (P23761), GVPA_HALVU (O33397), GVPA_HALWD (Q18JA1), GVPA_KORVE (Q1INZ5), GVPA_MICAN (B0JPK6), GVPA_MICBC (P08412), GVPA_MICDP (P07060), GVPA_MYCSJ (A3PZ32), GVPA_MYCSK (A1UFH1), GVPA_MYCSS (Q1B9J2), GVPA_NOSP7 (B2J663), GVPA_NOSS1 (Q8XFU1), GVPA_PLAAG (P0A3G0), GVPA_PLARU (P0A3G1), GVPA_PSEGP (P22453), GVPA_STRX0 (A0A1Q5LR04), GVPA_SYNJA (Q2JW39), GVPA_SYNJB (Q2JKK1), GVPA_THIPN (P80998), GVPJ1_HALSA (P24374), GVPJ2_HALSA (P33956), GVPJ_HALMT (Q02235), GVPJ_PRIMG (O68669), GVPJ_PSEGP (Q9AKS3), GVPM1_HALSA (P24377), GVPM2_HALSA (P33957), GVPM_HALMT (Q02238)» more
|
UniProtKB/Swiss-Prot False negative sequences |
7 sequences
GVPA_SPICC (P80997), GVPJ1_STRCO (Q9ZC08), GVPJ2_STRCO (Q9RJA9), GVPJ_DOLFA (P55147), GVPJ_NOSS1 (Q8YUT1), GVPS_PRIMG (O68671), GVPS_STRX0 (A0A1Q5LQW7)» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
GVPA_DACSA (Q9R5H8) |
PDB [Detailed view] |
1 PDB
8GBS |