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Entry: PS00677
General information about the entry
Entry nameDAO
Accession numberPS00677
Entry typePATTERN
DateJUN-1992 (CREATED); NOV-1997 (DATA UPDATE); DEC-2011 (INFO UPDATE).
PROSITE DocumentationPDOC00573
Name and characterization of the entry
DescriptionD-amino acid oxidases signature.
Pattern[LIVM](2)-H-[NHA]-Y-G-x-[GSA](2)-x-G-x(5)-G-x-A.
Numerical results
  • UniProtKB/Swiss-Prot release number: 01, total number of sequence entries in that release: 534242.
  • Total number of hits in UniProtKB/Swiss-Prot: 21 hits in 21 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 21 hits in 21 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 1
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 95.45 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 2,active_site(?)
  • VERSION: 1
Cross-references
UniProtKB/Swiss-ProtTrue positive hits:
OXDA1_CAEEL (O01739), OXDA2_CAEEL (Q95XG9), OXDA_CAVPO  (Q9Z1M5), 
OXDA_CRIGR  (Q9Z302), OXDA_FUSSO  (P24552), OXDA_HUMAN  (P14920), 
OXDA_MACFA  (A2V9Y8), OXDA_MOUSE  (P18894), OXDA_PIG    (P00371), 
OXDA_RABIT  (P22942), OXDA_RAT    (O35078), OXDA_RHOTO  (P80324), 
OXDA_TRIVR  (Q99042), OXDD1_CAEBR (A8WXM1), OXDD1_CAEEL (Q19564), 
OXDD2_CAEEL (O45307), OXDD_BOVIN  (P31228), OXDD_DICDI  (Q556W1), 
OXDD_HUMAN  (Q99489), OXDD_MOUSE  (Q922Z0), OXDD_PIG    (A3KCL7)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
DAO_MYCTU   (O07727)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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PDB
[Detailed view]		1AN9; 1C0I; 1C0K; 1C0L; 1C0P; 1DAO; 1DDO; 1EVI; 1KIF; 1VE9; 2DU8; 2DXO; 2DZG; 2E48; 2E49; 2E4A; 2E82; 2GNZ; 2I3K; 3CUK; 3G3E;

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