Entry: PS00686

General information about the entry
Entry name NFYA_HAP2_1
Accession number PS00686
Entry type PATTERN
Date JUN-1992 (CREATED); OCT-2005 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00578
Name and characterization of the entry
DescriptionNF-YA/HAP2 subunit signature.
Pattern [FY]-V-N-[AS]-K-Q-[FY]-x(2)-I-[ILM]-[KR]-R-R-x(2)-R-A-K-[LA]-E.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 16 hits in 16 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 16 hits in 16 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 2
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 88.89 %
Comments
  • Taxonomic range: Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 2
Cross-references
UniProtKB/Swiss-Prot True positive hits:
HAP2_KLULA  (P53768), HAP2_SCHPO  (P24488), HAP2_YEAST  (P06774), 
NFYA1_ARATH (Q9LXV5), NFYA3_ARATH (Q93ZH2), NFYA4_ARATH (Q8VY64), 
NFYA5_ARATH (Q9SYH4), NFYA6_ARATH (Q9LVJ7), NFYA8_ARATH (Q9LNP6), 
NFYA9_ARATH (Q945M9), NFYAA_ARATH (Q8LFU0), NFYA_BOVIN  (Q5E9S2), 
NFYA_DICDI  (Q54S29), NFYA_HUMAN  (P23511), NFYA_MOUSE  (P23708), 
NFYA_RAT    (P18576)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
NFYA2_ARATH (Q9M9X4), NFYA7_ARATH (Q84JP1)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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PDB
[Detailed view]		 4AWL;

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