Entry: PS00696

General information about the entry
Entry name ETF_ALPHA
Accession number PS00696
Entry type PATTERN
Date DEC-1992 (CREATED); DEC-2004 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00583
Name and characterization of the entry
DescriptionElectron transfer flavoprotein alpha-subunit signature.
Pattern [LI]-Y-[LIVM]-[AT]-x-[GA]-[IV]-[SD]-G-x-[IV]-Q-[HP]-x(2)-G-x(6)-[IV]-x-A- [IV]-N.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 64 hits in 64 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 64 hits in 64 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 1
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 1
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 98.46 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
ETFA_ARATH  (Q9C6I6), ETFA_BACSU  (P94551), ETFA_BOVIN  (Q2KJE4), 
ETFA_BRAJA  (P53573), ETFA_CAEEL  (Q93615), ETFA_CLOAB  (P52039), 
ETFA_CRYGW  (Q5Y223), ETFA_CRYNB  (P0CN61), ETFA_CRYNJ  (P0CN60), 
ETFA_CRYNV  (Q8J112), ETFA_DICDI  (Q54FD7), ETFA_HUMAN  (P13804), 
ETFA_MACFA  (Q8HXY0), ETFA_MEGEL  (O85692), ETFA_METME  (P53571), 
ETFA_MOUSE  (Q99LC5), ETFA_MYCLE  (O33096), ETFA_MYCTU  (O53275), 
ETFA_ORYSI  (A2XNR6), ETFA_ORYSJ  (Q75LJ3), ETFA_PARDE  (P38974), 
ETFA_PONAB  (Q5RC31), ETFA_PSEAE  (Q9HZP7), ETFA_RAT    (P13803), 
ETFA_SCHPO  (P78790), ETFA_THETC  (P71153), ETFA_YEAST  (Q12480), 
FIXB_AZOC5  (P26483), FIXB_AZOVI  (P53574), FIXB_BRAJA  (P10449), 
FIXB_CLOSA  (P53578), FIXB_ECO24  (A7ZHD5), FIXB_ECO27  (B7UI88), 
FIXB_ECO45  (B7MAG5), FIXB_ECO55  (B7L4G5), FIXB_ECO57  (Q8XA27), 
FIXB_ECO5E  (B5YYD6), FIXB_ECO7I  (B7NHE6), FIXB_ECO81  (B7MNP9), 
FIXB_ECO8A  (B7M0D9), FIXB_ECOBW  (C4ZPW8), FIXB_ECODH  (B1XBG7), 
FIXB_ECOHS  (A7ZVZ4), FIXB_ECOK1  (A1A792), FIXB_ECOL5  (Q0TLU7), 
FIXB_ECOL6  (P59674), FIXB_ECOLC  (B1IRD4), FIXB_ECOLI  (P31574), 
FIXB_ECOLU  (B7N7R7), FIXB_ECOSE  (B6HYZ3), FIXB_ECOSM  (B1LFX6), 
FIXB_ECOUT  (Q1RGF6), FIXB_ESCF3  (B7LWN3), FIXB_RHIME  (P09819), 
FIXB_RHISN  (Q53209), FIXB_SALA4  (B5F757), FIXB_SALPA  (Q5PIP0), 
FIXB_SALPK  (B5BL14), FIXB_SALTI  (P64096), FIXB_SALTY  (P64095), 
FIXB_SHIDS  (Q32K55), FIXB_SHIFL  (P59675), FIXB_SHISS  (Q3Z5W6), 
YDIR_ECOLI  (P77378)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
YGCQ_ECOLI  (Q46907)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
ETFA_CLOPA  (P81342)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1E11; 1EFP; 1EFV; 1O96; 1O97; 2A1T; 2A1U; 3CLR; 3CLS; 3CLT; 3CLU;

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