Entry: PS00706

General information about the entry
Entry name PRION_2
Accession number PS00706
Entry type PATTERN
Date DEC-1992 (CREATED); DEC-1992 (DATA UPDATE); APR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00263
Name and characterization of the entry
DescriptionPrion protein signature 2.
Pattern E-x-[ED]-x-K-[LIVM](2)-x-[KR]-[LIVM](2)-x-[QE]-M-C-x(2)-Q-Y.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_06, total number of sequence entries in that release: 540261.
  • Total number of hits in UniProtKB/Swiss-Prot: 70 hits in 70 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 70 hits in 70 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 0
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 100.00 %
Comments
  • Taxonomic range: Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 13,disulfide
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
PRIO1_TRAST (P40242), PRIO2_TRAST (P40243), PRIO_AILME  (Q6EH52), 
PRIO_ANTCE  (Q5UJG1), PRIO_AOTTR  (P40245), PRIO_ATEGE  (P40246), 
PRIO_ATEPA  (P51446), PRIO_BISBI  (Q5UAF1), PRIO_BOBOX  (B5SY89), 
PRIO_BOSGA  (Q5UJH0), PRIO_BOSIN  (Q5UJI7), PRIO_BOSTR  (Q5UJG7), 
PRIO_BOVIN  (P10279), PRIO_BUBBU  (Q5UJH8), PRIO_BUDTA  (Q95M08), 
PRIO_CALJA  (P40247), PRIO_CALMO  (P40248), PRIO_CAMDR  (P79141), 
PRIO_CANFA  (O46501), PRIO_CAPHI  (P52113), PRIO_CEBAP  (P40249), 
PRIO_CERAT  (Q95176), PRIO_CERDI  (P67989), PRIO_CEREL  (P67987), 
PRIO_CEREN  (P67986), PRIO_CERMO  (P61761), PRIO_CERNE  (P61762), 
PRIO_CHICK  (P27177), PRIO_CHLAE  (P67988), PRIO_COLGU  (P40251), 
PRIO_CRIGR  (Q60506), PRIO_CRIMI  (Q60468), PRIO_ERYPA  (Q95174), 
PRIO_FELCA  (O18754), PRIO_GORGO  (P40252), PRIO_HUMAN  (P04156), 
PRIO_HYLLA  (P61766), PRIO_HYLSY  (P61767), PRIO_LOPAT  (P67990), 
PRIO_MACAR  (P67993), PRIO_MACFA  (P67992), PRIO_MACFU  (P67994), 
PRIO_MACMU  (P67997), PRIO_MACNE  (P67995), PRIO_MACSY  (P67991), 
PRIO_MANSP  (P40255), PRIO_MESAU  (P04273), PRIO_MOSCH  (Q68G95), 
PRIO_MOUSE  (P04925), PRIO_MUSPF  (P52114), PRIO_NEOVI  (P40244), 
PRIO_ODOHE  (P47852), PRIO_OVICA  (Q7JIH3), PRIO_OVIMO  (Q7JIY2), 
PRIO_OVIMU  (Q7JK02), PRIO_PANTR  (P61768), PRIO_PAPHA  (P67996), 
PRIO_PIG    (P49927), PRIO_PONPY  (P40256), PRIO_RABIT  (Q95211), 
PRIO_RAT    (P13852), PRIO_RUPRU  (Q5XVM4), PRIO_SAISC  (P40258), 
PRIO_SHEEP  (P23907), PRIO_SIGHI  (Q9Z0T3), PRIO_THEGE  (Q95270), 
PRIO_TRAFR  (P40257), PRIO_TRAIM  (Q5UJG3), PRIO_TRIVU  (P51780), 
PRIO_VULLA  (B0FYL5)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1AG2; 1B10; 1DWY; 1DWZ; 1DX0; 1DX1; 1E1G; 1E1J; 1E1P; 1E1S; 1E1U; 1E1W; 1H0L; 1HJM; 1HJN; 1I4M; 1QLX; 1QLZ; 1QM0; 1QM1; 1QM2; 1QM3; 1TPX; 1TQB; 1TQC; 1U3M; 1UW3; 1XYJ; 1XYK; 1XYQ; 1XYU; 1XYW; 1XYX; 1Y15; 1Y16; 1Y2S; 2FJ3; 2JOH; 2JOM; 2K1D; 2K5O; 2KFM; 2KFO; 2KU5; 2KU6; 2L1D; 2L1E; 2L1H; 2L1K; 2L39; 2L40; 2LEJ; 2LFT; 2LH8; 2LSB; 2LV1; 2W9E; 3HAF; 3HAK; 3HEQ; 3HER; 3HES; 3HJ5; 3HJX; 4DGI;

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