Entry: PS00717

General information about the entry
Entry name SIGMA54_1
Accession number PS00717
Entry type PATTERN
Date DEC-1992 (CREATED); JUL-1999 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00593
Name and characterization of the entry
DescriptionSigma-54 factors family signature 1.
Pattern P-[LIVM]-x-[LIVM]-x(2)-[LIVM]-A-x(2)-[LIVMFT]-x(2)-[HS]-x-S-T-[LIVM]-S-R.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 29 hits in 29 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 29 hits in 29 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 0
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 100.00 %
Comments
  • Taxonomic range: Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
RP54_ACIGB  (P33983), RP54_AZOC5  (P33984), RP54_AZOVI  (P08623), 
RP54_BACSU  (P24219), RP54_BRAJA  (P30332), RP54_CAUCR  (Q03408), 
RP54_CLOK5  (P38944), RP54_CUPNH  (P28615), RP54_ECOLI  (P24255), 
RP54_HELPJ  (Q9ZLC8), RP54_HELPY  (P56143), RP54_KLEOX  (P06223), 
RP54_PSEAE  (P49988), RP54_PSEPK  (P0A171), RP54_PSEPU  (P0A172), 
RP54_RHIET  (P49989), RP54_RHIME  (P17263), RP54_RHIML  (P33985), 
RP54_RHISN  (P22881), RP54_RHOCA  (P0CY59), RP54_RHOCB  (D5ANH9), 
RP54_RHOSH  (Q01194), RP54_SALTY  (P26979), RP54_SHEVD  (Q9S0L2), 
RP54_THIFE  (P24695), RP54_TREPA  (O83149), RP54_VIBAN  (O08429), 
RP54_XANEU  (P77998), RP55_BRAJA  (P30333)
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