Entry: PS00740

General information about the entry

Entry name [info] MAM_1
Accession [info] PS00740
Entry type [info] PATTERN
Date [info] 01-OCT-1993 CREATED; 01-DEC-2004 DATA UPDATE; 05-JUL-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00604

Name and characterization of the entry

Description [info] MAM domain signature.
Pattern [info] 
[GE]-x-[LIVMFY](2)-x(3)-[STA]-x(10,11)-[LV]-x(4)-[LIVMF]-x(6,7)-C-[LIVM]-
x-F-x-[LIVMFY]-x(3)-[GSC].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_07 which contains 555'100 sequence entries.


Total number of hits 37 in 33 different sequences
Number of true positive hits 37 in 33 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 24
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 60.66 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 2
Site [info] disulfide(?) at position 11
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 33 sequences 

ENTK_BOVIN  (P98072    ), ENTK_HUMAN  (P98073    ), ENTK_MOUSE  (P97435    ), 

ENTK_PIG    (P98074    ), MAMC2_HUMAN (Q7Z304    ), MAMC2_MOUSE (Q8CG85    ), 
MEP1A_HUMAN (Q16819    ), MEP1A_MOUSE (P28825    ), MEP1A_RAT   (Q64230    ), 
MEP1B_HUMAN (Q16820    ), MEP1B_MOUSE (Q61847    ), MEP1B_RAT   (P28826    ), 
MLRP1_ACRMI (B3EWZ5    ), MLRP2_ACRMI (B3EWZ6    ), NRP1A_DANRE (Q8QFX6    ), 
NRP1_CHICK  (P79795    ), NRP1_HUMAN  (O14786    ), NRP1_MOUSE  (P97333    ), 
NRP1_RAT    (Q9QWJ9    ), NRP1_XENLA  (P28824    ), PTPRK_HUMAN (Q15262    ), 
PTPRK_MOUSE (P35822    ), PTPRM_HUMAN (P28827    ), PTPRM_MOUSE (P28828    ), 
PTPRT_HUMAN (O14522    ), PTPRT_MOUSE (Q99M80    ), PTPRU_CHICK (Q6YI48    ), 
PTPRU_DANRE (B3DK56    ), PTPRU_HUMAN (Q92729    ), THIB_XENLA  (Q91641    ), 
ZAN_HUMAN   (Q9Y493    ), ZAN_MOUSE   (O88799    ), ZAN_PIG     (Q28983    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 24 sequences 

AEGP_HUMAN  (Q6UXC1    ), AEGP_MOUSE  (A2AJA7    ), AEGP_RAT    (Q63191    ), 

ALK_HUMAN   (Q9UM73    ), ALK_MOUSE   (P97793    ), EGFL6_HUMAN (Q8IUX8    ), 
EGFL6_MOUSE (Q9JJZ5    ), EGFL6_XENLA (Q8AVH7    ), MALR1_HUMAN (Q5VYJ5    ), 
MDGA1_CHICK (Q0WYX8    ), MDGA1_HUMAN (Q8NFP4    ), MDGA1_MOUSE (Q0PMG2    ), 
MDGA1_RAT   (P85171    ), MDGA2_HUMAN (Q7Z553    ), MDGA2_MACFA (Q9GMT4    ), 
MDGA2_MOUSE (P60755    ), MDGA2_RAT   (P60756    ), MFP1_ACRMI  (B3EX02    ), 
NPNT_HUMAN  (Q6UXI9    ), NPNT_MOUSE  (Q91V88    ), NPNT_PONAB  (Q5RBP1    ), 
PTPRU_MOUSE (B1AUH1    ), SCD2_CAEEL  (O76411    ), ZAN_RABIT   (P57999    )
» more

PDB
[Detailed view]		 4 PDB

2V5Y; 4GWM; 4GWN; 5L73

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