Entry: PS00743

General information about the entry
Entry name BETA_LACTAMASE_B_1
Accession number PS00743
Entry type PATTERN
Date DEC-1992 (CREATED); APR-2003 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00606
Name and characterization of the entry
DescriptionBeta-lactamases class B signature 1.
Pattern [LI]-x-[STN]-[HN]-x-H-[GSTAD]-D-x(2)-G-[GP]-x(7,8)-[GS].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 19 hits in 19 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 15 hits in 15 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 4 hits in 4 different sequences
  • Number of known missed hits: 2
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 78.95 %
  • Recall (true hits / (true hits + false negatives)): 88.24 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 4,zinc
  • `Interesting' site in the pattern: 6,zinc
  • `Interesting' site in the pattern: 8,zinc
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
BLA1_STEMA  (P52700), BLA2_BAC17  (P10425), BLA2_BACCE  (P04190), 
BLAB1_FLAME (O08498), BLAB2_FLAME (Q9RB01), BLAB3_FLAME (Q9K303), 
BLAB4_FLAME (Q9XBN7), BLAB5_FLAME (Q9KJA9), BLAB6_FLAME (Q9KJB0), 
BLAB7_FLAME (Q9KJA8), BLAB8_FLAME (Q9KJA7), BLAB_AERHY  (P26918), 
BLAB_BACCE  (P14488), BLAB_BACFG  (P25910), BLAB_SERMA  (P52699)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
BDS1_YEAST  (Q08347), BLAN1_KLEPN (C7C422)
False positive hits (sequences which do not belong to the set under consideration):
GLO2M_ARATH (O24495), GLO2_ANADE  (Q2IJC6), GLO2_METCA  (Q60BX0), 
GLO2_SYNS3  (Q0I8S8)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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PDB
[Detailed view]		 1A7T; 1A8T; 1BC2; 1BMC; 1BVT; 1DD6; 1DXK; 1HLK; 1KR3; 1M2X; 1MQO; 1SML; 1VGN; 1X8G; 1X8H; 1X8I; 1ZNB; 2AIO; 2BC2; 2BFK; 2BFL; 2BFZ; 2BG2; 2BG6; 2BG7; 2BG8; 2BGA; 2BMI; 2DOO; 2FM6; 2FU6; 2FU7; 2FU8; 2FU9; 2GFJ; 2GFK; 2GKL; 2H6A; 2HB9; 2NXA; 2NYP; 2NZE; 2NZF; 2QDS; 2QDT; 2ZNB; 3BC2; 3F9O; 3FAI; 3FCZ; 3I0V; 3I11; 3I13; 3I14; 3I15; 3IOF; 3IOG; 3KNR; 3KNS; 3SW3; 3T9M; 3ZNB; 4ZNB;

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