Entry: PS00750

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General information about the entry

Entry name [info] TCP1_1
Accession [info] PS00750
Entry type [info] PATTERN
Date [info] DEC-1992 (CREATED); NOV-1995 (DATA UPDATE); SEP-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00610

Name and characterization of the entry

Description [info] Chaperonins TCP-1 signature 1.
Pattern [info]
[RKEL]-[ST]-x-[LMFY]-G-P-x-[GSA]-x-x-K-[LIVMF](2).

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_10 which contains 546'790 sequence entries.


Total number of hits 140 in 140 different sequences
Number of true positive hits 140 in 140 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 5
Number of 'partial' sequences 4
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 96.55 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
140 sequences

TCPA_ARATH  (P28769), TCPA_BOVIN  (Q32L40), TCPA_CAEEL  (P41988), 
TCPA_CRIGR  (P18279), TCPA_DICDI  (Q55BM4), TCPA_DROME  (P12613), 
TCPA_HUMAN  (P17987), TCPA_MACFA  (Q4R5G2), TCPA_MONDO  (Q9XT06), 
TCPA_MOUSE  (P11983), TCPA_PALPA  (Q9W790), TCPA_RAT    (P28480), 
TCPA_SCHMA  (Q94757), TCPA_SCHPO  (O94501), TCPA_TETPY  (O15891), 
TCPA_YEAST  (P12612), TCPB_BOVIN  (Q3ZBH0), TCPB_CAEEL  (P47207), 
TCPB_DICDI  (Q54ES9), TCPB_ENCCU  (Q8SQP2), TCPB_HUMAN  (P78371), 
TCPB_MACFA  (Q4R6F8), TCPB_MOUSE  (P80314), TCPB_RAT    (Q5XIM9), 
TCPB_SCHPO  (Q10147), TCPB_YEAST  (P39076), TCPD_ASHGO  (Q75A36), 
TCPD_BOVIN  (Q2T9X2), TCPD_CAEEL  (P47208), TCPD_CANGA  (Q6FQT2), 
TCPD_DEBHA  (Q6BXF6), TCPD_DICDI  (Q54CL2), TCPD_HUMAN  (P50991), 
TCPD_KLULA  (Q6CL82), TCPD_MOUSE  (P80315), TCPD_OCHTR  (Q9NB32), 
TCPD_PONAB  (Q5R637), TCPD_RAT    (Q7TPB1), TCPD_SCHPO  (P50999), 
TCPD_TAKRU  (P53451), TCPD_YARLI  (Q6C100), TCPD_YEAST  (P39078), 
TCPE1_AVESA (P40412), TCPE2_AVESA (P54411), TCPE_ARATH  (O04450), 
TCPE_CAEEL  (P47209), TCPE_DICDI  (Q54TD3), TCPE_HUMAN  (P48643), 
TCPE_MACFA  (Q4R6V2), TCPE_MOUSE  (P80316), TCPE_PONAB  (Q5RF02), 
TCPE_RAT    (Q68FQ0), TCPE_SCHPO  (Q9UTM4), TCPE_YEAST  (P40413), 
TCPG_BOVIN  (Q3T0K2), TCPG_DICDI  (Q54TH8), TCPG_DROME  (P48605), 
TCPG_ENCCU  (Q8SR76), TCPG_HUMAN  (P49368), TCPG_MACFA  (Q4R963), 
TCPG_MOUSE  (P80318), TCPG_OXYGR  (O00782), TCPG_PIG    (Q29068), 
TCPG_PONAB  (Q5NVF9), TCPG_RAT    (Q6P502), TCPG_SCHPO  (O74341), 
TCPG_THAWE  (Q9LKI7), TCPG_XENLA  (P50143), TCPG_YEAST  (P39077), 
TCPH_BOVIN  (Q2NKZ1), TCPH_CHICK  (Q5ZJK8), TCPH_DICDI  (Q54ER7), 
TCPH_ENCCU  (Q8SR53), TCPH_HUMAN  (Q99832), TCPH_MOUSE  (P80313), 
TCPH_PLAF7  (O77323), TCPH_PONAB  (Q5R5C8), TCPH_SCHPO  (P87153), 
TCPH_TETPY  (P54409), TCPQ_BOVIN  (Q3ZCI9), TCPQ_CAEBR  (A8X6I9), 
TCPQ_CAEEL  (Q9N358), TCPQ_CANAX  (P47828), TCPQ_CHICK  (Q6EE31), 
TCPQ_DICDI  (Q552J0), TCPQ_HUMAN  (P50990), TCPQ_MACFA  (Q4R5J0), 
TCPQ_MOUSE  (P42932), TCPQ_PONAB  (Q5RAP1), TCPQ_SCHPO  (P78921), 
TCPQ_YEAST  (P47079), TCPW_BOVIN  (Q3T084), TCPW_HUMAN  (Q92526), 
TCPZ_BOVIN  (Q3MHL7), TCPZ_CAEEL  (P46550), TCPZ_CHICK  (Q5ZJ54), 
TCPZ_DICDI  (Q76NU3), TCPZ_HUMAN  (P40227), TCPZ_MOUSE  (P80317), 
TCPZ_PIG    (Q29236), TCPZ_PONAB  (Q5RCD2), TCPZ_RABIT  (O77622), 
TCPZ_SCHPO  (O94515), TCPZ_YEAST  (P39079), THS1_HALVD  (O30561), 
THS2_HALVD  (O30560), THS3_HALVD  (Q9HHA2), THSA_AERPE  (Q9YDK6), 
THSA_ARCFU  (O28045), THSA_HALSA  (Q9HN70), THSA_METTH  (O26320), 
THSA_SULAC  (Q9V2T5), THSA_SULSH  (P46219), THSA_SULSO  (Q9V2S9), 
THSA_SULTO  (O24734), THSA_THEAC  (P48424), THSA_THEK1  (P61112), 
THSA_THEK8  (O24731), THSA_THEKO  (P61111), THSB_AERPE  (Q9YA66), 
THSB_ARCFU  (O28821), THSB_DESMO  (Q9V2T3), THSB_HALSA  (Q9HNI0), 
THSB_METTH  (O26885), THSB_SULAC  (Q9V2T4), THSB_SULSH  (P28488), 
THSB_SULSO  (Q9V2T8), THSB_SULTO  (O24735), THSB_THEAC  (P48425), 
THSB_THEK1  (O24730), THSB_THEK8  (O24732), THSB_THEKO  (Q52500), 
THSG_SULSH  (Q9HH21), THSG_SULSO  (Q9V2T7), THS_DESSY   (Q53546), 
THS_METJA   (Q58405), THS_METKA   (P50016), THS_METTL   (O93624), 
THS_PYRAB   (Q9V2Q7), THS_PYRHO   (O57762)
» More

UniProtKB/Swiss-Prot
False negative sequences
5 sequences

TCPG_TETPY  (P54408), TCPH_YEAST  (P42943), TCPQL_HUMAN (A6NM43), 
TCPQM_HUMAN (Q96SF2), TCPW_MOUSE  (Q61390)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
4 sequences

TCPA_AMBME  (P50157), TCPA_MESAU  (P86208), TCPB_MESAU  (P86245), 
TCPH_TETTH  (P54410)
» More

PDB
[Detailed view]
19 PDB

1A6D; 1A6E; 1Q2V; 1Q3Q; 1Q3R; 1Q3S; 3IYG; 3KTT; 3P9D; 3P9E; 4A0O; 4A0V; 4A0W; 4A13; 4AOL; 4APK; 4B2T; 4D8Q; 4D8R
» More

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