Entry: PS00750

General information about the entry
Entry name TCP1_1
Accession number PS00750
Entry type PATTERN
Date DEC-1992 (CREATED); NOV-1995 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00610
Name and characterization of the entry
DescriptionChaperonins TCP-1 signature 1.
Pattern [RKEL]-[ST]-x-[LMFY]-G-P-x-[GSA]-x-x-K-[LIVMF](2).
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 140 hits in 140 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 140 hits in 140 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 5
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 4
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 96.55 %
Comments
  • Taxonomic range: Archaea, Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
TCPA_ARATH  (P28769), TCPA_BOVIN  (Q32L40), TCPA_CAEEL  (P41988), 
TCPA_CRIGR  (P18279), TCPA_DICDI  (Q55BM4), TCPA_DROME  (P12613), 
TCPA_HUMAN  (P17987), TCPA_MACFA  (Q4R5G2), TCPA_MONDO  (Q9XT06), 
TCPA_MOUSE  (P11983), TCPA_PALPA  (Q9W790), TCPA_RAT    (P28480), 
TCPA_SCHMA  (Q94757), TCPA_SCHPO  (O94501), TCPA_TETPY  (O15891), 
TCPA_YEAST  (P12612), TCPB_BOVIN  (Q3ZBH0), TCPB_CAEEL  (P47207), 
TCPB_DICDI  (Q54ES9), TCPB_ENCCU  (Q8SQP2), TCPB_HUMAN  (P78371), 
TCPB_MACFA  (Q4R6F8), TCPB_MOUSE  (P80314), TCPB_RAT    (Q5XIM9), 
TCPB_SCHPO  (Q10147), TCPB_YEAST  (P39076), TCPD_AEDTR  (Q9NB32), 
TCPD_ASHGO  (Q75A36), TCPD_BOVIN  (Q2T9X2), TCPD_CAEEL  (P47208), 
TCPD_CANGA  (Q6FQT2), TCPD_DEBHA  (Q6BXF6), TCPD_DICDI  (Q54CL2), 
TCPD_HUMAN  (P50991), TCPD_KLULA  (Q6CL82), TCPD_MOUSE  (P80315), 
TCPD_PONAB  (Q5R637), TCPD_RAT    (Q7TPB1), TCPD_SCHPO  (P50999), 
TCPD_TAKRU  (P53451), TCPD_YARLI  (Q6C100), TCPD_YEAST  (P39078), 
TCPE1_AVESA (P40412), TCPE2_AVESA (P54411), TCPE_ARATH  (O04450), 
TCPE_CAEEL  (P47209), TCPE_DICDI  (Q54TD3), TCPE_HUMAN  (P48643), 
TCPE_MACFA  (Q4R6V2), TCPE_MOUSE  (P80316), TCPE_PONAB  (Q5RF02), 
TCPE_RAT    (Q68FQ0), TCPE_SCHPO  (Q9UTM4), TCPE_YEAST  (P40413), 
TCPG_BOVIN  (Q3T0K2), TCPG_DICDI  (Q54TH8), TCPG_DROME  (P48605), 
TCPG_ENCCU  (Q8SR76), TCPG_HUMAN  (P49368), TCPG_MACFA  (Q4R963), 
TCPG_MOUSE  (P80318), TCPG_OXYGR  (O00782), TCPG_PIG    (Q29068), 
TCPG_PONAB  (Q5NVF9), TCPG_RAT    (Q6P502), TCPG_SCHPO  (O74341), 
TCPG_THAWE  (Q9LKI7), TCPG_XENLA  (P50143), TCPG_YEAST  (P39077), 
TCPH_BOVIN  (Q2NKZ1), TCPH_CHICK  (Q5ZJK8), TCPH_DICDI  (Q54ER7), 
TCPH_ENCCU  (Q8SR53), TCPH_HUMAN  (Q99832), TCPH_MOUSE  (P80313), 
TCPH_PLAF7  (O77323), TCPH_PONAB  (Q5R5C8), TCPH_SCHPO  (P87153), 
TCPH_TETPY  (P54409), TCPQ_BOVIN  (Q3ZCI9), TCPQ_CAEBR  (A8X6I9), 
TCPQ_CAEEL  (Q9N358), TCPQ_CANAX  (P47828), TCPQ_CHICK  (Q6EE31), 
TCPQ_DICDI  (Q552J0), TCPQ_HUMAN  (P50990), TCPQ_MACFA  (Q4R5J0), 
TCPQ_MOUSE  (P42932), TCPQ_PONAB  (Q5RAP1), TCPQ_SCHPO  (P78921), 
TCPQ_YEAST  (P47079), TCPW_BOVIN  (Q3T084), TCPW_HUMAN  (Q92526), 
TCPZ_BOVIN  (Q3MHL7), TCPZ_CAEEL  (P46550), TCPZ_CHICK  (Q5ZJ54), 
TCPZ_DICDI  (Q76NU3), TCPZ_HUMAN  (P40227), TCPZ_MOUSE  (P80317), 
TCPZ_PIG    (Q29236), TCPZ_PONAB  (Q5RCD2), TCPZ_RABIT  (O77622), 
TCPZ_SCHPO  (O94515), TCPZ_YEAST  (P39079), THS1_HALVD  (O30561), 
THS2_HALVD  (O30560), THS3_HALVD  (Q9HHA2), THSA_AERPE  (Q9YDK6), 
THSA_ARCFU  (O28045), THSA_HALSA  (Q9HN70), THSA_METTH  (O26320), 
THSA_PYRKO  (P61111), THSA_SULAC  (Q9V2T5), THSA_SULSH  (P46219), 
THSA_SULSO  (Q9V2S9), THSA_SULTO  (O24734), THSA_THEAC  (P48424), 
THSA_THEK1  (P61112), THSA_THEK8  (O24731), THSB_AERPE  (Q9YA66), 
THSB_ARCFU  (O28821), THSB_DESMO  (Q9V2T3), THSB_HALSA  (Q9HNI0), 
THSB_METTH  (O26885), THSB_PYRKO  (Q52500), THSB_SULAC  (Q9V2T4), 
THSB_SULSH  (P28488), THSB_SULSO  (Q9V2T8), THSB_SULTO  (O24735), 
THSB_THEAC  (P48425), THSB_THEK1  (O24730), THSB_THEK8  (O24732), 
THSG_SULSH  (Q9HH21), THSG_SULSO  (Q9V2T7), THS_DESSY   (Q53546), 
THS_METJA   (Q58405), THS_METKA   (P50016), THS_METTL   (O93624), 
THS_PYRAB   (Q9V2Q7), THS_PYRHO   (O57762)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
TCPG_TETPY  (P54408), TCPH_YEAST  (P42943), TCPQL_HUMAN (A6NM43), 
TCPQM_HUMAN (Q96SF2), TCPW_MOUSE  (Q61390)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
TCPA_AMBME  (P50157), TCPA_MESAU  (P86208), TCPB_MESAU  (P86245), 
TCPH_TETTH  (P54410)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1A6D; 1A6E; 1Q2V; 1Q3Q; 1Q3R; 1Q3S; 3IYG; 3KTT; 3P9D; 3P9E; 4A0O; 4A0V; 4A0W; 4A13; 4D8Q; 4D8R;

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