Entry: PS00751

Forthcoming changes to the profile format
General information about the entry

Entry name [info] TCP1_2
Accession [info] PS00751
Entry type [info] PATTERN
Date [info] DEC-1992 (CREATED); DEC-2004 (DATA UPDATE); JUL-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00610

Name and characterization of the entry

Description [info] Chaperonins TCP-1 signature 2.
Pattern [info]
[LIVM]-[TS]-[NK]-[DN]-[GA]-[AVNHK]-[TAVC]-[LIVM](2)-x(2)-[LIVMA]-x-
[LIVM]-x-[SNH]-[PQHA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_08 which contains 546'238 sequence entries.


Total number of hits 141 in 141 different sequences
Number of true positive hits 141 in 141 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 3
Number of 'partial' sequences 4
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 97.92 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
141 sequences

TCPA_ARATH  (P28769), TCPA_BOVIN  (Q32L40), TCPA_CAEEL  (P41988), 
TCPA_CRIGR  (P18279), TCPA_DICDI  (Q55BM4), TCPA_DROME  (P12613), 
TCPA_HUMAN  (P17987), TCPA_MACFA  (Q4R5G2), TCPA_MONDO  (Q9XT06), 
TCPA_MOUSE  (P11983), TCPA_PALPA  (Q9W790), TCPA_RAT    (P28480), 
TCPA_SCHMA  (Q94757), TCPA_SCHPO  (O94501), TCPA_TETPY  (O15891), 
TCPA_YEAST  (P12612), TCPB_BOVIN  (Q3ZBH0), TCPB_CAEEL  (P47207), 
TCPB_DICDI  (Q54ES9), TCPB_HUMAN  (P78371), TCPB_MACFA  (Q4R6F8), 
TCPB_MOUSE  (P80314), TCPB_RAT    (Q5XIM9), TCPB_SCHPO  (Q10147), 
TCPB_YEAST  (P39076), TCPD_ASHGO  (Q75A36), TCPD_BOVIN  (Q2T9X2), 
TCPD_CAEEL  (P47208), TCPD_CANGA  (Q6FQT2), TCPD_DEBHA  (Q6BXF6), 
TCPD_DICDI  (Q54CL2), TCPD_HUMAN  (P50991), TCPD_KLULA  (Q6CL82), 
TCPD_MOUSE  (P80315), TCPD_OCHTR  (Q9NB32), TCPD_PONAB  (Q5R637), 
TCPD_RAT    (Q7TPB1), TCPD_SCHPO  (P50999), TCPD_TAKRU  (P53451), 
TCPD_YARLI  (Q6C100), TCPD_YEAST  (P39078), TCPE1_AVESA (P40412), 
TCPE2_AVESA (P54411), TCPE_ARATH  (O04450), TCPE_CAEEL  (P47209), 
TCPE_DICDI  (Q54TD3), TCPE_HUMAN  (P48643), TCPE_MACFA  (Q4R6V2), 
TCPE_MOUSE  (P80316), TCPE_PONAB  (Q5RF02), TCPE_RAT    (Q68FQ0), 
TCPE_SCHPO  (Q9UTM4), TCPG_BOVIN  (Q3T0K2), TCPG_DICDI  (Q54TH8), 
TCPG_DROME  (P48605), TCPG_ENCCU  (Q8SR76), TCPG_HUMAN  (P49368), 
TCPG_MACFA  (Q4R963), TCPG_MOUSE  (P80318), TCPG_OXYGR  (O00782), 
TCPG_PIG    (Q29068), TCPG_PONAB  (Q5NVF9), TCPG_RAT    (Q6P502), 
TCPG_SCHPO  (O74341), TCPG_TETPY  (P54408), TCPG_THAWE  (Q9LKI7), 
TCPG_XENLA  (P50143), TCPG_YEAST  (P39077), TCPH_BOVIN  (Q2NKZ1), 
TCPH_CHICK  (Q5ZJK8), TCPH_DICDI  (Q54ER7), TCPH_ENCCU  (Q8SR53), 
TCPH_HUMAN  (Q99832), TCPH_MOUSE  (P80313), TCPH_PLAF7  (O77323), 
TCPH_PONAB  (Q5R5C8), TCPH_SCHPO  (P87153), TCPH_TETPY  (P54409), 
TCPH_YEAST  (P42943), TCPQ_BOVIN  (Q3ZCI9), TCPQ_CAEBR  (A8X6I9), 
TCPQ_CAEEL  (Q9N358), TCPQ_CANAX  (P47828), TCPQ_CHICK  (Q6EE31), 
TCPQ_DICDI  (Q552J0), TCPQ_HUMAN  (P50990), TCPQ_MACFA  (Q4R5J0), 
TCPQ_MOUSE  (P42932), TCPQ_PONAB  (Q5RAP1), TCPQ_SCHPO  (P78921), 
TCPQ_YEAST  (P47079), TCPW_BOVIN  (Q3T084), TCPW_HUMAN  (Q92526), 
TCPW_MOUSE  (Q61390), TCPZ_BOVIN  (Q3MHL7), TCPZ_CAEEL  (P46550), 
TCPZ_CHICK  (Q5ZJ54), TCPZ_DICDI  (Q76NU3), TCPZ_HUMAN  (P40227), 
TCPZ_MOUSE  (P80317), TCPZ_PIG    (Q29236), TCPZ_PONAB  (Q5RCD2), 
TCPZ_RABIT  (O77622), TCPZ_SCHPO  (O94515), TCPZ_YEAST  (P39079), 
THS1_HALVD  (O30561), THS2_HALVD  (O30560), THS3_HALVD  (Q9HHA2), 
THSA_AERPE  (Q9YDK6), THSA_ARCFU  (O28045), THSA_HALSA  (Q9HN70), 
THSA_METTH  (O26320), THSA_SULAC  (Q9V2T5), THSA_SULSH  (P46219), 
THSA_SULSO  (Q9V2S9), THSA_SULTO  (O24734), THSA_THEAC  (P48424), 
THSA_THEK1  (P61112), THSA_THEK8  (O24731), THSA_THEKO  (P61111), 
THSB_AERPE  (Q9YA66), THSB_ARCFU  (O28821), THSB_DESMO  (Q9V2T3), 
THSB_HALSA  (Q9HNI0), THSB_METTH  (O26885), THSB_SULAC  (Q9V2T4), 
THSB_SULSH  (P28488), THSB_SULSO  (Q9V2T8), THSB_SULTO  (O24735), 
THSB_THEAC  (P48425), THSB_THEK1  (O24730), THSB_THEK8  (O24732), 
THSB_THEKO  (Q52500), THSG_SULSH  (Q9HH21), THSG_SULSO  (Q9V2T7), 
THS_DESSY   (Q53546), THS_METJA   (Q58405), THS_METKA   (P50016), 
THS_METTL   (O93624), THS_PYRAB   (Q9V2Q7), THS_PYRHO   (O57762)
» More

UniProtKB/Swiss-Prot
False negative sequences
3 sequences

TCPE_YEAST  (P40413), TCPQL_HUMAN (A6NM43), TCPQM_HUMAN (Q96SF2)

		
UniProtKB/Swiss-Prot
'Partial' sequences
4 sequences

TCPA_AMBME  (P50157), TCPA_MESAU  (P86208), TCPB_MESAU  (P86245), 
TCPH_TETTH  (P54410)
» More

PDB
[Detailed view]
16 PDB

1A6D; 1A6E; 1Q3R; 3IYG; 3KTT; 3P9D; 3P9E; 4A0O; 4A0V; 4A0W; 4A13; 4AOL; 4APK; 4B2T; 4D8Q; 4D8R
» More

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission