Entry: PS00775

General information about the entry

Entry name [info] GLYCOSYL_HYDROL_F3
Accession [info] PS00775
Entry type [info] PATTERN
Date [info] DEC-1992 (CREATED); APR-2006 (DATA UPDATE); JUN-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00621

Name and characterization of the entry

Description [info] Glycosyl hydrolases family 3 active site.
Pattern [info]
[LIVM](2)-[KR]-x-[EQKRD]-x(4)-G-[LIVMFTC]-[LIVT]-[LIVMF]-[ST]-D-x(2)-
[SGADNIT].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_08 which contains 551'987 sequence entries.


Total number of hits 158 in 158 different sequences
Number of true positive hits 156 in 156 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 87
Number of 'partial' sequences 3
Precision (true positives / (true positives + false positives)) 98.73 %
Recall (true positives / (true positives + false negatives)) 64.20 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] active_site at position 11
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
156 sequences

APY_BIFBA   (F6C6C1    ), APY_BIFLN   (E7CY69    ), BGH3A_BACO1 (A7LXS8    ), 
BGL1_ASPAC  (P48825    ), BGL1_SACFI  (P22506    ), BGL2_SACFI  (P22507    ), 
BGLA_ARTBC  (D4AN50    ), BGLA_ASPCL  (A1CR85    ), BGLA_ASPFC  (B0XPE1    ), 
BGLA_ASPFN  (B8NRX2    ), BGLA_ASPFU  (Q4WJJ3    ), BGLA_ASPKW  (P87076    ), 
BGLA_ASPNC  (A2RAL4    ), BGLA_ASPOR  (Q2UUD6    ), BGLA_ASPTE  (D0VKF5    ), 
BGLA_ASPTN  (Q0CTD7    ), BGLA_EMENI  (Q5B5S8    ), BGLA_NEOFI  (A1D451    ), 
BGLB_CLOTH  (P14002    ), BGLB_EMENI  (Q5BFG8    ), BGLF_ASPFC  (B0Y7Q8    ), 
BGLF_ASPFN  (B8NP65    ), BGLF_ASPFU  (Q4WMU3    ), BGLF_ASPOR  (Q2UN12    ), 
BGLF_ASPTN  (Q0CI67    ), BGLF_EMENI  (Q5B6C6    ), BGLF_NEOFI  (A1DMR8    ), 
BGLI_ASPCL  (A1CA51    ), BGLI_ASPFC  (B0Y3M6    ), BGLI_ASPFN  (B8NDE2    ), 
BGLI_ASPFU  (Q4WU49    ), BGLI_ASPNC  (A2R989    ), BGLI_ASPOR  (Q2U8Y5    ), 
BGLI_ASPTN  (Q0CAF5    ), BGLI_EMENI  (Q5BB53    ), BGLI_NEOFI  (A1DFA8    ), 
BGLJ_EMENI  (Q5AV15    ), BGLK_ASPFC  (B0YBJ3    ), BGLK_ASPFU  (Q4WA69    ), 
BGLK_EMENI  (Q5BA18    ), BGLS_BUTFI  (P16084    ), BGLS_KLUMA  (P07337    ), 
BGLS_RHIRD  (P27034    ), BGLS_RUMAL  (P15885    ), BGLS_SCHPO  (Q9P6J6    ), 
BGLS_WICAO  (P06835    ), BGLX_DICCH  (Q46684    ), BGLX_ECOLI  (P33363    ), 
BGLX_SALTY  (Q56078    ), HEXA_PSEO7  (P48823    ), NAG3_CELFI  (Q7WUL3    ), 
NAGZ_ACTP2  (A3N1B7    ), NAGZ_ACTP7  (B3GXZ7    ), NAGZ_ACTPJ  (B0BQ51    ), 
NAGZ_AROAE  (Q5P081    ), NAGZ_BACSU  (P40406    ), NAGZ_BORA1  (Q2KXM7    ), 
NAGZ_BORBR  (Q7WH65    ), NAGZ_BORPA  (Q7W9J5    ), NAGZ_BORPE  (Q7VWV8    ), 
NAGZ_CHRVO  (Q7NWB7    ), NAGZ_CROS8  (A7MFT1    ), NAGZ_ECO24  (A7ZKL1    ), 
NAGZ_ECO27  (B7UPC3    ), NAGZ_ECO45  (B7MJ94    ), NAGZ_ECO55  (B7LG40    ), 
NAGZ_ECO57  (P58067    ), NAGZ_ECO5E  (B5YVX6    ), NAGZ_ECO7I  (B7NKH2    ), 
NAGZ_ECO81  (B7MTN7    ), NAGZ_ECO8A  (B7LX41    ), NAGZ_ECOBW  (C4ZS47    ), 
NAGZ_ECODH  (B1XA17    ), NAGZ_ECOHS  (A7ZZ65    ), NAGZ_ECOK1  (A1AA01    ), 
NAGZ_ECOL6  (Q8FIN2    ), NAGZ_ECOLC  (B1IUF8    ), NAGZ_ECOLI  (P75949    ), 
NAGZ_ECOLU  (B7NAY5    ), NAGZ_ECOSE  (B6I9I5    ), NAGZ_ECOSM  (B1LI37    ), 
NAGZ_ECOUT  (Q1RD47    ), NAGZ_ERWT9  (B2VDM3    ), NAGZ_ESCF3  (B7LT32    ), 
NAGZ_HAEDU  (Q7VNI8    ), NAGZ_HAEI8  (Q4QLU8    ), NAGZ_HAEIE  (A5UDA9    ), 
NAGZ_HAEIN  (P44955    ), NAGZ_HAEPS  (B8F5N0    ), NAGZ_IDILO  (Q5QUZ5    ), 
NAGZ_KLEP3  (B5XXG4    ), NAGZ_MANSM  (Q65VK7    ), NAGZ_METFK  (Q1H075    ), 
NAGZ_NEIG1  (Q5FA94    ), NAGZ_NEIG2  (B4RQ67    ), NAGZ_NEIM0  (A9M1Z4    ), 
NAGZ_NEIMA  (Q9JVT3    ), NAGZ_NEIMB  (Q9K0Q4    ), NAGZ_NEIMF  (A1KSD9    ), 
NAGZ_NITEU  (Q82SJ8    ), NAGZ_NITMU  (Q2Y863    ), NAGZ_PECAS  (Q6D674    ), 
NAGZ_PECCP  (C6DKR8    ), NAGZ_PHOLL  (Q7N397    ), NAGZ_PHOPR  (Q6LJ30    ), 
NAGZ_PROMH  (B4EVE7    ), NAGZ_PSEA8  (B7UYS5    ), NAGZ_PSEAB  (Q02PG9    ), 
NAGZ_PSEAE  (Q9HZK0    ), NAGZ_PSYIN  (A1SW90    ), NAGZ_SALA4  (B5F8E5    ), 
NAGZ_SALCH  (Q57QE6    ), NAGZ_SALDC  (B5FK98    ), NAGZ_SALEP  (B5QXC7    ), 
NAGZ_SALG2  (B5RB93    ), NAGZ_SALHS  (B4TFI4    ), NAGZ_SALNS  (B4T3P6    ), 
NAGZ_SALPA  (Q5PGT0    ), NAGZ_SALPB  (A9N5J6    ), NAGZ_SALSV  (B4TTH9    ), 
NAGZ_SALTI  (Q8Z7I6    ), NAGZ_SALTY  (Q8ZQ06    ), NAGZ_SHEFN  (Q080R9    ), 
NAGZ_SHEON  (Q8EEW2    ), NAGZ_SHESA  (A0KXK3    ), NAGZ_SHESM  (Q0HJG7    ), 
NAGZ_SHESR  (Q0HVQ8    ), NAGZ_SHIB3  (B2U513    ), NAGZ_SHIBS  (Q31ZG4    ), 
NAGZ_SHIDS  (Q32EW7    ), NAGZ_SHIFL  (Q7UCW4    ), NAGZ_SHISS  (Q3Z310    ), 
NAGZ_STRM5  (B4SRK3    ), NAGZ_STRMK  (B2FPW9    ), NAGZ_TOLAT  (C4LEY6    ), 
NAGZ_VIBC3  (A5F8Y1    ), NAGZ_VIBCH  (Q9KU37    ), NAGZ_VIBCM  (C3LSU7    ), 
NAGZ_VIBFU  (P96157    ), NAGZ_XANAC  (Q8PMU1    ), NAGZ_XANC5  (Q3BVU6    ), 
NAGZ_XANC8  (Q4USG7    ), NAGZ_XANCB  (B0RX17    ), NAGZ_XANCP  (Q8PB42    ), 
NAGZ_XANOM  (Q2P4L0    ), NAGZ_XANOR  (Q5H1Q0    ), NAGZ_XYLF2  (B2I6G9    ), 
NAGZ_XYLFA  (Q9PAZ0    ), NAGZ_XYLFM  (B0U3L0    ), NAGZ_XYLFT  (Q87BR5    ), 
NAGZ_YERE8  (A1JME4    ), NAGZ_YERP3  (A7FH41    ), NAGZ_YERPB  (B2K731    ), 
NAGZ_YERPE  (Q8ZFS3    ), NAGZ_YERPS  (Q669N5    ), NAGZ_YERPY  (B1JI47    )
» more

UniProtKB/Swiss-Prot
False negative sequences
87 sequences

BGH3B_BACO1 (A7LXU3    ), BGLC_ASPFN  (B8NGU6    ), BGLC_ASPOR  (Q2UFP8    ), 
BGLC_EMENI  (Q5BCC6    ), BGLD_ASPFN  (B8NJF4    ), BGLD_ASPNC  (A2QPK4    ), 
BGLD_ASPOR  (Q2UNR0    ), BGLD_EMENI  (Q5AUW5    ), BGLE_ASPCL  (A1CMH6    ), 
BGLE_ASPFC  (B0YD91    ), BGLE_ASPFU  (Q4WD56    ), BGLE_ASPOR  (Q2UTX5    ), 
BGLE_EMENI  (Q5AYH8    ), BGLE_NEOFI  (A1DLJ5    ), BGLG_ASPFN  (B8NMR5    ), 
BGLG_ASPOR  (Q2U325    ), BGLG_ASPTN  (Q0CUC1    ), BGLG_EMENI  (Q5B0F4    ), 
BGLG_NEOFI  (A1DC16    ), BGLH_ASPCL  (A1CUR8    ), BGLH_ASPFC  (B0XM94    ), 
BGLH_ASPFN  (B8NPL7    ), BGLH_ASPFU  (Q4WL79    ), BGLH_ASPOR  (Q2U9M7    ), 
BGLH_EMENI  (Q5B6C7    ), BGLH_NEOFI  (A1DPG0    ), BGLJ_ASPFC  (B0Y8M8    ), 
BGLJ_ASPFU  (Q4WLY1    ), BGLJ_NEOFI  (A1DNN8    ), BGLL_ASPFC  (B0YB65    ), 
BGLL_ASPFU  (Q4WGT3    ), BGLL_ASPTN  (Q0CEF3    ), BGLL_EMENI  (Q5B9F2    ), 
BGLL_NEOFI  (A1DCV5    ), BGLM_ASPFC  (B0XPB8    ), BGLM_ASPFN  (B8N5S6    ), 
BGLM_ASPFU  (Q4WR62    ), BGLM_ASPNC  (A5ABF5    ), BGLM_ASPOR  (Q2UDK7    ), 
BGLM_ASPTN  (Q0C7L4    ), BGLM_EMENI  (Q5AWD4    ), BGLM_NEOFI  (A1D122    ), 
BGLN_EMENI  (Q5B681    ), BGLO_EMENI  (Q5BG51    ), BXL1_ARATH  (Q9FGY1    ), 
BXL2_ARATH  (Q94KD8    ), BXL3_ARATH  (Q9LXD6    ), BXL4_ARATH  (Q9FLG1    ), 
BXL5_ARATH  (Q9LJN4    ), BXL6_ARATH  (Q9LXA8    ), BXL7_ARATH  (Q9SGZ5    ), 
BXLB_ASPCL  (A1CCL9    ), BXLB_ASPFC  (B0Y0I4    ), BXLB_ASPFN  (B8NYD8    ), 
BXLB_ASPFU  (Q4WFI6    ), BXLB_ASPOR  (Q2TYT2    ), BXLB_ASPTN  (Q0CB82    ), 
BXLB_EMENI  (Q5ATH9    ), GLUA_DICDI  (Q23892    ), NAGZ_ACTSZ  (A6VKU4    ), 
NAGZ_ALKEH  (Q0A911    ), NAGZ_EDWI9  (C5BFM6    ), NAGZ_HAES1  (Q0I414    ), 
NAGZ_HISS2  (B0UTC6    ), NAGZ_METCA  (Q606N2    ), NAGZ_NITEC  (Q0AF74    ), 
NAGZ_NITOC  (Q3J953    ), NAGZ_PASMU  (Q9CPH0    ), NAGZ_THICR  (Q31G32    ), 
NAGZ_THIDA  (Q3SKU2    ), NAGZ_THISH  (B8GSD2    ), XYL1_MEDSV  (A5JTQ2    ), 
XYL2_MEDSV  (A5JTQ3    ), XYL3A_PRER2 (D5EY15    ), XYND_ASPAC  (C0STH4    ), 
XYND_ASPAW  (Q4AEG8    ), XYND_ASPCL  (A1CND4    ), XYND_ASPFC  (B0XP71    ), 
XYND_ASPFN  (B8MYV0    ), XYND_ASPFU  (Q4WRB0    ), XYND_ASPJA  (B6EY09    ), 
XYND_ASPNC  (A2QA27    ), XYND_ASPNG  (O00089    ), XYND_ASPOR  (Q2UR38    ), 
XYND_ASPTN  (Q0CMH8    ), XYND_EMENI  (Q5BAS1    ), XYND_NEOFI  (A1DJS5    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences
3 sequences

BGL3_ASPWE  (P29090    ), BGLS_SCHCO  (P29091    ), XYL1_MEDSA  (P86450    )

		
UniProtKB/Swiss-Prot
False positive sequences
2 sequences

LOLB_HAEDU  (Q7VL53    ), YFMJ_BACSU  (O34812    )

		
PDB
[Detailed view]
20 PDB

1TR9; 1Y65; 2OXN; 3BMX; 3GS6; 3GSM; 3NVD; 4GVF; 4GVG; 4GVH; 4HZM; 4IIB; 4IIC; 4IID; 4IIE; 4IIF; 4IIG; 4IIH; 5FJI; 5FJJ
» more

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