Entry: PS00775

General information about the entry

Entry name [info] GLYCOSYL_HYDROL_F3
Accession [info] PS00775
Entry type [info] PATTERN
Date [info] DEC-1992 (CREATED); APR-2006 (DATA UPDATE); MAY-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00621

Name and characterization of the entry

Description [info] Glycosyl hydrolases family 3 active site.
Pattern [info]
[LIVM](2)-[KR]-x-[EQKRD]-x(4)-G-[LIVMFTC]-[LIVT]-[LIVMF]-[ST]-D-x(2)-
[SGADNIT].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_07 which contains 548'872 sequence entries.


Total number of hits 157 in 157 different sequences
Number of true positive hits 155 in 155 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 87
Number of 'partial' sequences 3
Precision (true positives / (true positives + false positives)) 98.73 %
Recall (true positives / (true positives + false negatives)) 64.05 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] active_site at position 11
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
155 sequences

APY_BIFBA   (F6C6C1), APY_BIFLN   (E7CY69), BGH3A_BACO1 (A7LXS8), 
BGL1_ASPAC  (P48825), BGL1_SACFI  (P22506), BGL2_SACFI  (P22507), 
BGLA_ASPCL  (A1CR85), BGLA_ASPFC  (B0XPE1), BGLA_ASPFN  (B8NRX2), 
BGLA_ASPFU  (Q4WJJ3), BGLA_ASPKW  (P87076), BGLA_ASPNC  (A2RAL4), 
BGLA_ASPOR  (Q2UUD6), BGLA_ASPTE  (D0VKF5), BGLA_ASPTN  (Q0CTD7), 
BGLA_EMENI  (Q5B5S8), BGLA_NEOFI  (A1D451), BGLB_CLOTH  (P14002), 
BGLB_EMENI  (Q5BFG8), BGLF_ASPFC  (B0Y7Q8), BGLF_ASPFN  (B8NP65), 
BGLF_ASPFU  (Q4WMU3), BGLF_ASPOR  (Q2UN12), BGLF_ASPTN  (Q0CI67), 
BGLF_EMENI  (Q5B6C6), BGLF_NEOFI  (A1DMR8), BGLI_ASPCL  (A1CA51), 
BGLI_ASPFC  (B0Y3M6), BGLI_ASPFN  (B8NDE2), BGLI_ASPFU  (Q4WU49), 
BGLI_ASPNC  (A2R989), BGLI_ASPOR  (Q2U8Y5), BGLI_ASPTN  (Q0CAF5), 
BGLI_EMENI  (Q5BB53), BGLI_NEOFI  (A1DFA8), BGLJ_EMENI  (Q5AV15), 
BGLK_ASPFC  (B0YBJ3), BGLK_ASPFU  (Q4WA69), BGLK_EMENI  (Q5BA18), 
BGLS_BUTFI  (P16084), BGLS_HANAN  (P06835), BGLS_KLUMA  (P07337), 
BGLS_RHIRD  (P27034), BGLS_RUMAL  (P15885), BGLS_SCHPO  (Q9P6J6), 
BGLX_DICCH  (Q46684), BGLX_ECOLI  (P33363), BGLX_SALTY  (Q56078), 
HEXA_PSEO7  (P48823), NAG3_CELFI  (Q7WUL3), NAGZ_ACTP2  (A3N1B7), 
NAGZ_ACTP7  (B3GXZ7), NAGZ_ACTPJ  (B0BQ51), NAGZ_AROAE  (Q5P081), 
NAGZ_BACSU  (P40406), NAGZ_BORA1  (Q2KXM7), NAGZ_BORBR  (Q7WH65), 
NAGZ_BORPA  (Q7W9J5), NAGZ_BORPE  (Q7VWV8), NAGZ_CHRVO  (Q7NWB7), 
NAGZ_CROS8  (A7MFT1), NAGZ_ECO24  (A7ZKL1), NAGZ_ECO27  (B7UPC3), 
NAGZ_ECO45  (B7MJ94), NAGZ_ECO55  (B7LG40), NAGZ_ECO57  (P58067), 
NAGZ_ECO5E  (B5YVX6), NAGZ_ECO7I  (B7NKH2), NAGZ_ECO81  (B7MTN7), 
NAGZ_ECO8A  (B7LX41), NAGZ_ECOBW  (C4ZS47), NAGZ_ECODH  (B1XA17), 
NAGZ_ECOHS  (A7ZZ65), NAGZ_ECOK1  (A1AA01), NAGZ_ECOL6  (Q8FIN2), 
NAGZ_ECOLC  (B1IUF8), NAGZ_ECOLI  (P75949), NAGZ_ECOLU  (B7NAY5), 
NAGZ_ECOSE  (B6I9I5), NAGZ_ECOSM  (B1LI37), NAGZ_ECOUT  (Q1RD47), 
NAGZ_ERWT9  (B2VDM3), NAGZ_ESCF3  (B7LT32), NAGZ_HAEDU  (Q7VNI8), 
NAGZ_HAEI8  (Q4QLU8), NAGZ_HAEIE  (A5UDA9), NAGZ_HAEIN  (P44955), 
NAGZ_HAEPS  (B8F5N0), NAGZ_IDILO  (Q5QUZ5), NAGZ_KLEP3  (B5XXG4), 
NAGZ_MANSM  (Q65VK7), NAGZ_METFK  (Q1H075), NAGZ_NEIG1  (Q5FA94), 
NAGZ_NEIG2  (B4RQ67), NAGZ_NEIM0  (A9M1Z4), NAGZ_NEIMA  (Q9JVT3), 
NAGZ_NEIMB  (Q9K0Q4), NAGZ_NEIMF  (A1KSD9), NAGZ_NITEU  (Q82SJ8), 
NAGZ_NITMU  (Q2Y863), NAGZ_PECAS  (Q6D674), NAGZ_PECCP  (C6DKR8), 
NAGZ_PHOLL  (Q7N397), NAGZ_PHOPR  (Q6LJ30), NAGZ_PROMH  (B4EVE7), 
NAGZ_PSEA8  (B7UYS5), NAGZ_PSEAB  (Q02PG9), NAGZ_PSEAE  (Q9HZK0), 
NAGZ_PSYIN  (A1SW90), NAGZ_SALA4  (B5F8E5), NAGZ_SALCH  (Q57QE6), 
NAGZ_SALDC  (B5FK98), NAGZ_SALEP  (B5QXC7), NAGZ_SALG2  (B5RB93), 
NAGZ_SALHS  (B4TFI4), NAGZ_SALNS  (B4T3P6), NAGZ_SALPA  (Q5PGT0), 
NAGZ_SALPB  (A9N5J6), NAGZ_SALSV  (B4TTH9), NAGZ_SALTI  (Q8Z7I6), 
NAGZ_SALTY  (Q8ZQ06), NAGZ_SHEFN  (Q080R9), NAGZ_SHEON  (Q8EEW2), 
NAGZ_SHESA  (A0KXK3), NAGZ_SHESM  (Q0HJG7), NAGZ_SHESR  (Q0HVQ8), 
NAGZ_SHIB3  (B2U513), NAGZ_SHIBS  (Q31ZG4), NAGZ_SHIDS  (Q32EW7), 
NAGZ_SHIFL  (Q7UCW4), NAGZ_SHISS  (Q3Z310), NAGZ_STRM5  (B4SRK3), 
NAGZ_STRMK  (B2FPW9), NAGZ_TOLAT  (C4LEY6), NAGZ_VIBC3  (A5F8Y1), 
NAGZ_VIBCH  (Q9KU37), NAGZ_VIBCM  (C3LSU7), NAGZ_VIBFU  (P96157), 
NAGZ_XANAC  (Q8PMU1), NAGZ_XANC5  (Q3BVU6), NAGZ_XANC8  (Q4USG7), 
NAGZ_XANCB  (B0RX17), NAGZ_XANCP  (Q8PB42), NAGZ_XANOM  (Q2P4L0), 
NAGZ_XANOR  (Q5H1Q0), NAGZ_XYLF2  (B2I6G9), NAGZ_XYLFA  (Q9PAZ0), 
NAGZ_XYLFM  (B0U3L0), NAGZ_XYLFT  (Q87BR5), NAGZ_YERE8  (A1JME4), 
NAGZ_YERP3  (A7FH41), NAGZ_YERPB  (B2K731), NAGZ_YERPE  (Q8ZFS3), 
NAGZ_YERPS  (Q669N5), NAGZ_YERPY  (B1JI47)
» More

UniProtKB/Swiss-Prot
False negative sequences
87 sequences

BGH3B_BACO1 (A7LXU3), BGLC_ASPFN  (B8NGU6), BGLC_ASPOR  (Q2UFP8), 
BGLC_EMENI  (Q5BCC6), BGLD_ASPFN  (B8NJF4), BGLD_ASPNC  (A2QPK4), 
BGLD_ASPOR  (Q2UNR0), BGLD_EMENI  (Q5AUW5), BGLE_ASPCL  (A1CMH6), 
BGLE_ASPFC  (B0YD91), BGLE_ASPFU  (Q4WD56), BGLE_ASPOR  (Q2UTX5), 
BGLE_EMENI  (Q5AYH8), BGLE_NEOFI  (A1DLJ5), BGLG_ASPFN  (B8NMR5), 
BGLG_ASPOR  (Q2U325), BGLG_ASPTN  (Q0CUC1), BGLG_EMENI  (Q5B0F4), 
BGLG_NEOFI  (A1DC16), BGLH_ASPCL  (A1CUR8), BGLH_ASPFC  (B0XM94), 
BGLH_ASPFN  (B8NPL7), BGLH_ASPFU  (Q4WL79), BGLH_ASPOR  (Q2U9M7), 
BGLH_EMENI  (Q5B6C7), BGLH_NEOFI  (A1DPG0), BGLJ_ASPFC  (B0Y8M8), 
BGLJ_ASPFU  (Q4WLY1), BGLJ_NEOFI  (A1DNN8), BGLL_ASPFC  (B0YB65), 
BGLL_ASPFU  (Q4WGT3), BGLL_ASPTN  (Q0CEF3), BGLL_EMENI  (Q5B9F2), 
BGLL_NEOFI  (A1DCV5), BGLM_ASPFC  (B0XPB8), BGLM_ASPFN  (B8N5S6), 
BGLM_ASPFU  (Q4WR62), BGLM_ASPNC  (A5ABF5), BGLM_ASPOR  (Q2UDK7), 
BGLM_ASPTN  (Q0C7L4), BGLM_EMENI  (Q5AWD4), BGLM_NEOFI  (A1D122), 
BGLN_EMENI  (Q5B681), BGLO_EMENI  (Q5BG51), BXL1_ARATH  (Q9FGY1), 
BXL2_ARATH  (Q94KD8), BXL3_ARATH  (Q9LXD6), BXL4_ARATH  (Q9FLG1), 
BXL5_ARATH  (Q9LJN4), BXL6_ARATH  (Q9LXA8), BXL7_ARATH  (Q9SGZ5), 
BXLB_ASPCL  (A1CCL9), BXLB_ASPFC  (B0Y0I4), BXLB_ASPFN  (B8NYD8), 
BXLB_ASPFU  (Q4WFI6), BXLB_ASPOR  (Q2TYT2), BXLB_ASPTN  (Q0CB82), 
BXLB_EMENI  (Q5ATH9), GLUA_DICDI  (Q23892), NAGZ_ACTSZ  (A6VKU4), 
NAGZ_ALKEH  (Q0A911), NAGZ_EDWI9  (C5BFM6), NAGZ_HAES1  (Q0I414), 
NAGZ_HISS2  (B0UTC6), NAGZ_METCA  (Q606N2), NAGZ_NITEC  (Q0AF74), 
NAGZ_NITOC  (Q3J953), NAGZ_PASMU  (Q9CPH0), NAGZ_THICR  (Q31G32), 
NAGZ_THIDA  (Q3SKU2), NAGZ_THISH  (B8GSD2), XYL1_MEDSV  (A5JTQ2), 
XYL2_MEDSV  (A5JTQ3), XYL3A_PRER2 (D5EY15), XYND_ASPAC  (C0STH4), 
XYND_ASPAW  (Q4AEG8), XYND_ASPCL  (A1CND4), XYND_ASPFC  (B0XP71), 
XYND_ASPFN  (B8MYV0), XYND_ASPFU  (Q4WRB0), XYND_ASPJA  (B6EY09), 
XYND_ASPNC  (A2QA27), XYND_ASPNG  (O00089), XYND_ASPOR  (Q2UR38), 
XYND_ASPTN  (Q0CMH8), XYND_EMENI  (Q5BAS1), XYND_NEOFI  (A1DJS5)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
3 sequences

BGL3_ASPWE  (P29090), BGLS_SCHCO  (P29091), XYL1_MEDSA  (P86450)

		
UniProtKB/Swiss-Prot
False positive sequences
2 sequences

LOLB_HAEDU  (Q7VL53), YFMJ_BACSU  (O34812)

		
PDB
[Detailed view]
18 PDB

1TR9; 1Y65; 2OXN; 3BMX; 3GS6; 3GSM; 3NVD; 4GVF; 4GVG; 4GVH; 4HZM; 4IIB; 4IIC; 4IID; 4IIE; 4IIF; 4IIG; 4IIH
» More

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