Entry: PS00775

General information about the entry
Entry name GLYCOSYL_HYDROL_F3
Accession number PS00775
Entry type PATTERN
Date DEC-1992 (CREATED); APR-2006 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00621
Name and characterization of the entry
DescriptionGlycosyl hydrolases family 3 active site.
Pattern [LIVM](2)-[KR]-x-[EQKRD]-x(4)-G-[LIVMFTC]-[LIVT]-[LIVMF]-[ST]-D-x(2)- [SGADNIT].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 156 hits in 156 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 154 hits in 154 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 2 hits in 2 different sequences
  • Number of known missed hits: 85
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 3
  • Precision (true hits / (true hits + false positives)): 98.72 %
  • Recall (true hits / (true hits + false negatives)): 64.44 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 11,active_site
  • VERSION: 2
Cross-references
UniProtKB/Swiss-Prot True positive hits:
APY_BIFBA   (F6C6C1), APY_BIFLN   (E7CY69), BGL1_ASPAC  (P48825), 
BGL1_SACFI  (P22506), BGL2_SACFI  (P22507), BGLA_ASPCL  (A1CR85), 
BGLA_ASPFC  (B0XPE1), BGLA_ASPFN  (B8NRX2), BGLA_ASPFU  (Q4WJJ3), 
BGLA_ASPKW  (P87076), BGLA_ASPNC  (A2RAL4), BGLA_ASPOR  (Q2UUD6), 
BGLA_ASPTE  (D0VKF5), BGLA_ASPTN  (Q0CTD7), BGLA_EMENI  (Q5B5S8), 
BGLA_NEOFI  (A1D451), BGLB_CLOTH  (P14002), BGLB_EMENI  (Q5BFG8), 
BGLF_ASPFC  (B0Y7Q8), BGLF_ASPFN  (B8NP65), BGLF_ASPFU  (Q4WMU3), 
BGLF_ASPOR  (Q2UN12), BGLF_ASPTN  (Q0CI67), BGLF_EMENI  (Q5B6C6), 
BGLF_NEOFI  (A1DMR8), BGLI_ASPCL  (A1CA51), BGLI_ASPFC  (B0Y3M6), 
BGLI_ASPFN  (B8NDE2), BGLI_ASPFU  (Q4WU49), BGLI_ASPNC  (A2R989), 
BGLI_ASPOR  (Q2U8Y5), BGLI_ASPTN  (Q0CAF5), BGLI_EMENI  (Q5BB53), 
BGLI_NEOFI  (A1DFA8), BGLJ_EMENI  (Q5AV15), BGLK_ASPFC  (B0YBJ3), 
BGLK_ASPFU  (Q4WA69), BGLK_EMENI  (Q5BA18), BGLS_BUTFI  (P16084), 
BGLS_HANAN  (P06835), BGLS_KLUMA  (P07337), BGLS_RHIRD  (P27034), 
BGLS_RUMAL  (P15885), BGLS_SCHPO  (Q9P6J6), BGLX_ECOLI  (P33363), 
BGLX_ERWCH  (Q46684), BGLX_SALTY  (Q56078), HEXA_PSEO7  (P48823), 
NAG3_CELFI  (Q7WUL3), NAGZ_ACTP2  (A3N1B7), NAGZ_ACTP7  (B3GXZ7), 
NAGZ_ACTPJ  (B0BQ51), NAGZ_AROAE  (Q5P081), NAGZ_BORA1  (Q2KXM7), 
NAGZ_BORBR  (Q7WH65), NAGZ_BORPA  (Q7W9J5), NAGZ_BORPE  (Q7VWV8), 
NAGZ_CHRVO  (Q7NWB7), NAGZ_CROS8  (A7MFT1), NAGZ_ECO24  (A7ZKL1), 
NAGZ_ECO27  (B7UPC3), NAGZ_ECO45  (B7MJ94), NAGZ_ECO55  (B7LG40), 
NAGZ_ECO57  (P58067), NAGZ_ECO5E  (B5YVX6), NAGZ_ECO7I  (B7NKH2), 
NAGZ_ECO81  (B7MTN7), NAGZ_ECO8A  (B7LX41), NAGZ_ECOBW  (C4ZS47), 
NAGZ_ECODH  (B1XA17), NAGZ_ECOHS  (A7ZZ65), NAGZ_ECOK1  (A1AA01), 
NAGZ_ECOL6  (Q8FIN2), NAGZ_ECOLC  (B1IUF8), NAGZ_ECOLI  (P75949), 
NAGZ_ECOLU  (B7NAY5), NAGZ_ECOSE  (B6I9I5), NAGZ_ECOSM  (B1LI37), 
NAGZ_ECOUT  (Q1RD47), NAGZ_ERWCT  (Q6D674), NAGZ_ERWT9  (B2VDM3), 
NAGZ_ESCF3  (B7LT32), NAGZ_HAEDU  (Q7VNI8), NAGZ_HAEI8  (Q4QLU8), 
NAGZ_HAEIE  (A5UDA9), NAGZ_HAEIN  (P44955), NAGZ_HAEPS  (B8F5N0), 
NAGZ_IDILO  (Q5QUZ5), NAGZ_KLEP3  (B5XXG4), NAGZ_MANSM  (Q65VK7), 
NAGZ_METFK  (Q1H075), NAGZ_NEIG1  (Q5FA94), NAGZ_NEIG2  (B4RQ67), 
NAGZ_NEIM0  (A9M1Z4), NAGZ_NEIMA  (Q9JVT3), NAGZ_NEIMB  (Q9K0Q4), 
NAGZ_NEIMF  (A1KSD9), NAGZ_NITEU  (Q82SJ8), NAGZ_NITMU  (Q2Y863), 
NAGZ_PECCP  (C6DKR8), NAGZ_PHOLL  (Q7N397), NAGZ_PHOPR  (Q6LJ30), 
NAGZ_PROMH  (B4EVE7), NAGZ_PSEA8  (B7UYS5), NAGZ_PSEAB  (Q02PG9), 
NAGZ_PSEAE  (Q9HZK0), NAGZ_PSYIN  (A1SW90), NAGZ_SALA4  (B5F8E5), 
NAGZ_SALCH  (Q57QE6), NAGZ_SALDC  (B5FK98), NAGZ_SALEP  (B5QXC7), 
NAGZ_SALG2  (B5RB93), NAGZ_SALHS  (B4TFI4), NAGZ_SALNS  (B4T3P6), 
NAGZ_SALPA  (Q5PGT0), NAGZ_SALPB  (A9N5J6), NAGZ_SALSV  (B4TTH9), 
NAGZ_SALTI  (Q8Z7I6), NAGZ_SALTY  (Q8ZQ06), NAGZ_SHEFN  (Q080R9), 
NAGZ_SHEON  (Q8EEW2), NAGZ_SHESA  (A0KXK3), NAGZ_SHESM  (Q0HJG7), 
NAGZ_SHESR  (Q0HVQ8), NAGZ_SHIB3  (B2U513), NAGZ_SHIBS  (Q31ZG4), 
NAGZ_SHIDS  (Q32EW7), NAGZ_SHIFL  (Q7UCW4), NAGZ_SHISS  (Q3Z310), 
NAGZ_STRM5  (B4SRK3), NAGZ_STRMK  (B2FPW9), NAGZ_TOLAT  (C4LEY6), 
NAGZ_VIBC3  (A5F8Y1), NAGZ_VIBCH  (Q9KU37), NAGZ_VIBCM  (C3LSU7), 
NAGZ_VIBFU  (P96157), NAGZ_XANAC  (Q8PMU1), NAGZ_XANC5  (Q3BVU6), 
NAGZ_XANC8  (Q4USG7), NAGZ_XANCB  (B0RX17), NAGZ_XANCP  (Q8PB42), 
NAGZ_XANOM  (Q2P4L0), NAGZ_XANOR  (Q5H1Q0), NAGZ_XYLF2  (B2I6G9), 
NAGZ_XYLFA  (Q9PAZ0), NAGZ_XYLFM  (B0U3L0), NAGZ_XYLFT  (Q87BR5), 
NAGZ_YERE8  (A1JME4), NAGZ_YERP3  (A7FH41), NAGZ_YERPB  (B2K731), 
NAGZ_YERPE  (Q8ZFS3), NAGZ_YERPS  (Q669N5), NAGZ_YERPY  (B1JI47), 
YBBD_BACSU  (P40406)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
BGLC_ASPFN  (B8NGU6), BGLC_ASPOR  (Q2UFP8), BGLC_EMENI  (Q5BCC6), 
BGLD_ASPFN  (B8NJF4), BGLD_ASPNC  (A2QPK4), BGLD_ASPOR  (Q2UNR0), 
BGLD_EMENI  (Q5AUW5), BGLE_ASPCL  (A1CMH6), BGLE_ASPFC  (B0YD91), 
BGLE_ASPFU  (Q4WD56), BGLE_ASPOR  (Q2UTX5), BGLE_EMENI  (Q5AYH8), 
BGLE_NEOFI  (A1DLJ5), BGLG_ASPFN  (B8NMR5), BGLG_ASPOR  (Q2U325), 
BGLG_ASPTN  (Q0CUC1), BGLG_EMENI  (Q5B0F4), BGLG_NEOFI  (A1DC16), 
BGLH_ASPCL  (A1CUR8), BGLH_ASPFC  (B0XM94), BGLH_ASPFN  (B8NPL7), 
BGLH_ASPFU  (Q4WL79), BGLH_ASPOR  (Q2U9M7), BGLH_EMENI  (Q5B6C7), 
BGLH_NEOFI  (A1DPG0), BGLJ_ASPFC  (B0Y8M8), BGLJ_ASPFU  (Q4WLY1), 
BGLJ_NEOFI  (A1DNN8), BGLL_ASPFC  (B0YB65), BGLL_ASPFU  (Q4WGT3), 
BGLL_ASPTN  (Q0CEF3), BGLL_EMENI  (Q5B9F2), BGLL_NEOFI  (A1DCV5), 
BGLM_ASPFC  (B0XPB8), BGLM_ASPFN  (B8N5S6), BGLM_ASPFU  (Q4WR62), 
BGLM_ASPNC  (A5ABF5), BGLM_ASPOR  (Q2UDK7), BGLM_ASPTN  (Q0C7L4), 
BGLM_EMENI  (Q5AWD4), BGLM_NEOFI  (A1D122), BGLN_EMENI  (Q5B681), 
BGLO_EMENI  (Q5BG51), BXL1_ARATH  (Q9FGY1), BXL2_ARATH  (Q94KD8), 
BXL3_ARATH  (Q9LXD6), BXL4_ARATH  (Q9FLG1), BXL5_ARATH  (Q9LJN4), 
BXL6_ARATH  (Q9LXA8), BXL7_ARATH  (Q9SGZ5), BXLB_ASPCL  (A1CCL9), 
BXLB_ASPFC  (B0Y0I4), BXLB_ASPFN  (B8NYD8), BXLB_ASPFU  (Q4WFI6), 
BXLB_ASPOR  (Q2TYT2), BXLB_ASPTN  (Q0CB82), BXLB_EMENI  (Q5ATH9), 
GLUA_DICDI  (Q23892), NAGZ_ACTSZ  (A6VKU4), NAGZ_ALHEH  (Q0A911), 
NAGZ_EDWI9  (C5BFM6), NAGZ_HAES1  (Q0I414), NAGZ_HAES2  (B0UTC6), 
NAGZ_METCA  (Q606N2), NAGZ_NITEC  (Q0AF74), NAGZ_NITOC  (Q3J953), 
NAGZ_PASMU  (Q9CPH0), NAGZ_THICR  (Q31G32), NAGZ_THIDA  (Q3SKU2), 
NAGZ_THISH  (B8GSD2), XYL1_MEDSV  (A5JTQ2), XYL2_MEDSV  (A5JTQ3), 
XYND_ASPAC  (C0STH4), XYND_ASPAW  (Q4AEG8), XYND_ASPCL  (A1CND4), 
XYND_ASPFC  (B0XP71), XYND_ASPFN  (B8MYV0), XYND_ASPFU  (Q4WRB0), 
XYND_ASPJA  (B6EY09), XYND_ASPNC  (A2QA27), XYND_ASPNG  (O00089), 
XYND_ASPOR  (Q2UR38), XYND_ASPTN  (Q0CMH8), XYND_EMENI  (Q5BAS1), 
XYND_NEOFI  (A1DJS5)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
BGL3_ASPWE  (P29090), BGLS_SCHCO  (P29091), XYL1_MEDSA  (P86450)
False positive hits (sequences which do not belong to the set under consideration):
LOLB_HAEDU  (Q7VL53), YFMJ_BACSU  (O34812)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1TR9; 1Y65; 2OXN; 3BMX; 3GS6; 3GSM; 3NVD; 4GVF; 4GVG; 4GVH;

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View entry in raw text format (no links)
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