PROSITE entry PS00777
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General information about the entry
| Entry name [info] | GH11_2 |
| Accession [info] | PS00777 |
| Entry type [info] | PATTERN |
| Date [info] |
01-DEC-1992 CREATED;
01-NOV-1995 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00622 |
| Associated ProRule [info] | PRU10063 |
Name and characterization of the entry
| Description [info] | Glycosyl hydrolases family 11 (GH11) active site signature 2. |
| Pattern [info] |
[LIVMF]-x(2)-E-[AG]-[YWG]-[QRFGS]-[SG]-[STAN]-G-x-[SAF]. |
Numerical results [info]
| Total number of hits | 72 in 71 different sequences |
| Number of true positive hits | 66 in 65 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 6 in 6 different sequences |
| Number of false negative sequences | 10 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 91.67 % |
| Recall (true positives / (true positives + false negatives)) | 86.84 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 2 |
| Site [info] | active_site at position 3 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
65 sequences
XY11A_BOTFU (Q2LMP0), XY11A_PSEXY (P83513), XYN11_PAEBA (V9TXH2), XYN1_COCCA (Q06562), XYN1_HUMIN (P55334), XYN1_HYPJQ (G0R947), XYN1_HYPJR (P36218), XYN1_LEUGO (A6YAP7), XYN1_PYRGI (P0CT48), XYN1_PYRO7 (P0CT49), XYN2_HUMGT (Q9HGE1), XYN2_HYPJQ (G0RUP7), XYN2_HYPJR (P36217), XYN2_RHIOR (W0HJ53), XYN2_TRIHA (B5A7N4), XYN3_ASPKW (P33557), XYN3_PENPR (A0A2U7R6V5), XYN4_PYRGI (Q92245), XYN4_PYRO7 (G4NA54), XYN6_ASPNG (Q6QJ75), XYNA1_THEST (Q8GJ44), XYNA2_THEST (P33558), XYNA_ASPAW (P55328), XYNA_ASPCL (A1CCU0), XYNA_ASPFC (B0XXF3), XYNA_ASPFN (B8NKE9), XYNA_ASPFU (Q4WG11), XYNA_ASPNG (P55329), XYNA_ASPOR (Q9HFA4), XYNA_ASPTN (Q0CFS3), XYNA_ASPTU (P55331), XYNA_BACPU (P00694), XYNA_BACSU (P18429), XYNA_BYSSP (P81536), XYNA_CLOSA (P17137), XYNA_EMENI (P55332), XYNA_GEOSE (P45705), XYNA_GIBZE (I1S2K3), XYNA_NEOFI (A1DJ52), XYNA_NEOPA (P29127), XYNA_NIACI (P09850), XYNA_RUMFL (P29126), XYNA_SCHCO (P35809), XYNA_THELA (O43097), XYNB_ASPFC (B0Y8Q8), XYNB_ASPFU (Q4WLV2), XYNB_ASPKW (P48824), XYNB_ASPNC (A2Q7I0), XYNB_ASPNG (P55330), XYNB_EMENI (P55333), XYNB_GIBZE (I1RII8), XYNB_NEOFI (A1DNU5), XYNB_PENOX (E7EF85), XYNB_PHACH (B7SIW1), XYNB_STRLI (P26515), XYNB_STRSQ (D7EZJ3), XYNB_TALPU (Q96W72), XYNC_FIBSS (P35811), XYNC_STRCO (Q9RI72), XYNC_STRLI (P26220), XYND_CELFI (P54865), XYND_RUMFL (Q53317), XYNG_VERDA (Q0ZHI9), XYN_PHACE (O97402), XYN_TRIHA (P48793)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
10 sequences
424Y_VERDV (G2X4G0), XY11A_CELJA (Q59674), XY11B_CELJA (Q8VP72), XYN4_ASPNG (Q12550), XYN5_ASPNC (A2R4D1), XYN5_ASPNG (Q12549), XYNA_PIRSP (Q12667), XYNB_ASPCL (A1CU59), XYNB_ASPFN (B8NJ86), XYNB_ASPOR (P87037)» more |
| UniProtKB/Swiss-Prot False positive sequences |
6 sequences
CHI1_RHINI (P29025), IF2_SYNY3 (P72689), PKHH3_HUMAN (Q7Z736), RPOA_RUBXD (Q1AU56), TETR1_ECOLX (P03038), TGAL8_ORYSJ (Q69T21)» more |
| PDB [Detailed view] |
79 PDB
1AXK; 1BK1; 1BVV; 1C5H; 1C5I; 1ENX; 1HV0; 1HV1; 1PVX; 1RED; 1REE; 1REF; 1T6G; 1UKR; 1XNB; 1XNC; 1XND; 1XXN; 1XYN; 1XYO; 1XYP; 1YNA; 2B42; 2B45; 2B46; 2BVV; 2C1F; 2D97; 2D98; 2DCY; 2DCZ; 2DFB; 2DFC; 2VG9; 3EXU; 3HD8; 3LB9; 3LGR; 3RI8; 3RI9; 3VZK; 3VZL; 3VZN; 3VZO; 4HK9; 4HKL; 4HKW; 4S2D; 4S2F; 4S2G; 4S2H; 4XPV; 4XQ4; 4XQD; 4XQW; 5EJ3; 5K7P; 5K9Y; 5ZF3; 5ZH0; 5ZH9; 5ZII; 5ZIW; 5ZKZ; 5ZO0; 6JXL; 6K9O; 6KVV; 6KW9; 6KWD; 6KWF; 6QE8; 7MGU; 7VUG; 7VUH; 7VUI; 7VUJ; 7XN9; 7XNA » more |