Entry: PS00805

General information about the entry

Entry name [info] CALRETICULIN_REPEAT
Accession [info] PS00805
Entry type [info] PATTERN
Date [info] DEC-1992 (CREATED); DEC-2004 (DATA UPDATE); MAR-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00636

Name and characterization of the entry

Description [info] Calreticulin family repeated motif signature.
Pattern [info]
[IVM]-x-[DV]-x-[DENST]-x(2)-K-P-[DEH]-D-W-[DEN].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_04 which contains 550'960 sequence entries.


Total number of hits 113 in 48 different sequences
Number of true positive hits 113 in 48 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 4
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 99.12 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 3
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
48 sequences

CALR1_ARATH (O04151), CALR2_ARATH (Q38858), CALR3_ARATH (O04153), 
CALR_BERST  (Q9ZPP1), CALR_BETVU  (O81919), CALR_BOMMO  (Q7Z1E6), 
CALR_BOVIN  (P52193), CALR_CAEBR  (Q61KR9), CALR_CAEEL  (P27798), 
CALR_CHLAE  (Q4VIT5), CALR_CHLRE  (Q9STD3), CALR_CRIGR  (Q8K3H7), 
CALR_DICDI  (Q23858), CALR_DROME  (P29413), CALR_EUGGR  (Q9ZNY3), 
CALR_HUMAN  (P27797), CALR_MACFA  (Q4R6K8), CALR_MACFU  (Q2HWU3), 
CALR_MAIZE  (Q9SP22), CALR_MOUSE  (P14211), CALR_NICPL  (Q40401), 
CALR_ONCVO  (P11012), CALR_ORYSJ  (Q9SLY8), CALR_PIG    (P28491), 
CALR_PRUAR  (Q9XF98), CALR_RABIT  (P15253), CALR_RAT    (P18418), 
CALR_RICCO  (P93508), CALR_SCHMA  (Q06814), CALX1_ARATH (P29402), 
CALX2_ARATH (Q38798), CALX_ARTBC  (D4AVD4), CALX_ASPFU  (Q6Q487), 
CALX_CAEBR  (A8XA40), CALX_CAEEL  (P34652), CALX_CANLF  (P24643), 
CALX_HELTU  (Q39994), CALX_HUMAN  (P27824), CALX_MOUSE  (P35564), 
CALX_PEA    (O82709), CALX_PONAB  (Q5R440), CALX_RAT    (P35565), 
CALX_SCHPO  (P36581), CALX_SOYBN  (Q39817), CALX_YEAST  (P27825), 
CLGN_BOVIN  (Q3SYT6), CLGN_CANLF  (E2RA18), CLGN_HUMAN  (O14967)
» more

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

CLGN_MOUSE  (P52194)

		
UniProtKB/Swiss-Prot
'Partial' sequences
4 sequences

CALR_CANLF  (P28490), CALR_ENTHI  (P83003), CALR_PELES  (P31832), 
CALR_SPIOL  (P30806)
» more

PDB
[Detailed view]
5 PDB

1HHN; 1JHN; 1K91; 1K9C; 3RG0

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