Entry: PS00805

Forthcoming changes to the profile format
General information about the entry

Entry name [info] CALRETICULIN_REPEAT
Accession [info] PS00805
Entry type [info] PATTERN
Date [info] DEC-1992 (CREATED); DEC-2004 (DATA UPDATE); OCT-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00636

Name and characterization of the entry

Description [info] Calreticulin family repeated motif signature.
Pattern [info]
[IVM]-x-[DV]-x-[DENST]-x(2)-K-P-[DEH]-D-W-[DEN].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_11 which contains 547'085 sequence entries.


Total number of hits 111 in 47 different sequences
Number of true positive hits 111 in 47 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 1
Number of 'partial' sequences 4
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 99.11 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 3
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
47 sequences

CALR1_ARATH (O04151), CALR2_ARATH (Q38858), CALR3_ARATH (O04153), 
CALR_BERST  (Q9ZPP1), CALR_BETVU  (O81919), CALR_BOMMO  (Q7Z1E6), 
CALR_BOVIN  (P52193), CALR_CAEBR  (Q61KR9), CALR_CAEEL  (P27798), 
CALR_CHLAE  (Q4VIT5), CALR_CHLRE  (Q9STD3), CALR_CRIGR  (Q8K3H7), 
CALR_DICDI  (Q23858), CALR_DROME  (P29413), CALR_EUGGR  (Q9ZNY3), 
CALR_HUMAN  (P27797), CALR_MACFA  (Q4R6K8), CALR_MACFU  (Q2HWU3), 
CALR_MAIZE  (Q9SP22), CALR_MOUSE  (P14211), CALR_NICPL  (Q40401), 
CALR_ONCVO  (P11012), CALR_ORYSJ  (Q9SLY8), CALR_PIG    (P28491), 
CALR_PRUAR  (Q9XF98), CALR_RABIT  (P15253), CALR_RAT    (P18418), 
CALR_RICCO  (P93508), CALR_SCHMA  (Q06814), CALX1_ARATH (P29402), 
CALX2_ARATH (Q38798), CALX_ASPFU  (Q6Q487), CALX_CAEBR  (A8XA40), 
CALX_CAEEL  (P34652), CALX_CANFA  (P24643), CALX_HELTU  (Q39994), 
CALX_HUMAN  (P27824), CALX_MOUSE  (P35564), CALX_PEA    (O82709), 
CALX_PONAB  (Q5R440), CALX_RAT    (P35565), CALX_SCHPO  (P36581), 
CALX_SOYBN  (Q39817), CALX_YEAST  (P27825), CLGN_BOVIN  (Q3SYT6), 
CLGN_CANFA  (E2RA18), CLGN_HUMAN  (O14967)
» More

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

CLGN_MOUSE  (P52194)

		
UniProtKB/Swiss-Prot
'Partial' sequences
4 sequences

CALR_CANFA  (P28490), CALR_ENTHI  (P83003), CALR_PELES  (P31832), 
CALR_SPIOL  (P30806)
» More


View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission