Entry: PS00805

General information about the entry

Entry name [info] CALRETICULIN_REPEAT
Accession [info] PS00805
Entry type [info] PATTERN
Date [info] DEC-1992 (CREATED); DEC-2004 (DATA UPDATE); MAY-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00636

Name and characterization of the entry

Description [info] Calreticulin family repeated motif signature.
Pattern [info]
[IVM]-x-[DV]-x-[DENST]-x(2)-K-P-[DEH]-D-W-[DEN].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_05 which contains 551'193 sequence entries.


Total number of hits 113 in 48 different sequences
Number of true positive hits 113 in 48 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 4
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 99.12 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 3
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
48 sequences

CALR1_ARATH (O04151    ), CALR2_ARATH (Q38858    ), CALR3_ARATH (O04153    ), 
CALR_BERST  (Q9ZPP1    ), CALR_BETVU  (O81919    ), CALR_BOMMO  (Q7Z1E6    ), 
CALR_BOVIN  (P52193    ), CALR_CAEBR  (Q61KR9    ), CALR_CAEEL  (P27798    ), 
CALR_CHLAE  (Q4VIT5    ), CALR_CHLRE  (Q9STD3    ), CALR_CRIGR  (Q8K3H7    ), 
CALR_DICDI  (Q23858    ), CALR_DROME  (P29413    ), CALR_EUGGR  (Q9ZNY3    ), 
CALR_HUMAN  (P27797    ), CALR_MACFA  (Q4R6K8    ), CALR_MACFU  (Q2HWU3    ), 
CALR_MAIZE  (Q9SP22    ), CALR_MOUSE  (P14211    ), CALR_NICPL  (Q40401    ), 
CALR_ONCVO  (P11012    ), CALR_ORYSJ  (Q9SLY8    ), CALR_PIG    (P28491    ), 
CALR_PRUAR  (Q9XF98    ), CALR_RABIT  (P15253    ), CALR_RAT    (P18418    ), 
CALR_RICCO  (P93508    ), CALR_SCHMA  (Q06814    ), CALX1_ARATH (P29402    ), 
CALX2_ARATH (Q38798    ), CALX_ARTBC  (D4AVD4    ), CALX_ASPFU  (Q6Q487    ), 
CALX_CAEBR  (A8XA40    ), CALX_CAEEL  (P34652    ), CALX_CANLF  (P24643    ), 
CALX_HELTU  (Q39994    ), CALX_HUMAN  (P27824    ), CALX_MOUSE  (P35564    ), 
CALX_PEA    (O82709    ), CALX_PONAB  (Q5R440    ), CALX_RAT    (P35565    ), 
CALX_SCHPO  (P36581    ), CALX_SOYBN  (Q39817    ), CALX_YEAST  (P27825    ), 
CLGN_BOVIN  (Q3SYT6    ), CLGN_CANLF  (E2RA18    ), CLGN_HUMAN  (O14967    )
» more

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

CLGN_MOUSE  (P52194    )

		
UniProtKB/Swiss-Prot
'Partial' sequences
4 sequences

CALR_CANLF  (P28490    ), CALR_ENTHI  (P83003    ), CALR_PELES  (P31832    ), 
CALR_SPIOL  (P30806    )
» more

PDB
[Detailed view]
5 PDB

1HHN; 1JHN; 1K91; 1K9C; 3RG0

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission