Entry: PS00819

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General information about the entry

Entry name [info] DPS_2
Accession [info] PS00819
Entry type [info] PATTERN
Date [info] OCT-1993 (CREATED); JUL-1998 (DATA UPDATE); MAR-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00645

Name and characterization of the entry

Description [info] Dps protein family signature 2.
Pattern [info]
[LIVMFY]-[DH]-x-[LIVM]-[GA]-E-R-x(3)-[LIF]-[GDN]-x(2)-[PA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_04 which contains 544'996 sequence entries.


Total number of hits 74 in 74 different sequences
Number of true positive hits 73 in 73 different sequences
Number of 'unknown' hits
Number of false positive hits 1
Number of false negative sequences 26
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 98.65 %
Recall (true positives / (true positives + false negatives)) 73.74 %

Comments [info]

Taxonomic range [info] Archaea, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
73 sequences

DPS2_BACAN  (Q8RPQ2), DPSA_NOSS1  (Q8YQL3), DPSA_SYNP6  (Q9R6T3), 
DPS_ACIAD   (Q6FCX7), DPS_BREBE   (P83695), DPS_CITFR   (Q84AP1), 
DPS_CITK8   (A8AIW9), DPS_CROS8   (A7MEY6), DPS_ECO24   (A7ZJM7), 
DPS_ECO27   (B7UM08), DPS_ECO45   (B7MGS0), DPS_ECO55   (B7LC95), 
DPS_ECO57   (P0ABT3), DPS_ECO5E   (B5YSA4), DPS_ECO7I   (B7NNP4), 
DPS_ECO81   (B7MQR6), DPS_ECO8A   (B7M787), DPS_ECOBW   (C4ZXY4), 
DPS_ECODH   (B1X7E2), DPS_ECOHS   (A7ZY70), DPS_ECOL5   (Q0TJN6), 
DPS_ECOL6   (Q8FJM0), DPS_ECOLC   (B1IXF6), DPS_ECOLI   (P0ABT2), 
DPS_ECOLU   (B7NAB2), DPS_ECOSE   (B6I7W9), DPS_ECOSM   (B1LMA4), 
DPS_ECOUT   (Q1REB2), DPS_ENT38   (A4W8F0), DPS_ENTCL   (Q84FI1), 
DPS_ESCF3   (B7LMB6), DPS_HELPJ   (Q9ZMJ1), DPS_HELPY   (P43313), 
DPS_KLEP3   (B5XYT2), DPS_KLEP7   (A6T6Q6), DPS_KLEPN   (Q84FI0), 
DPS_KLUCR   (Q6XZR0), DPS_LISIN   (P80725), DPS_LISMO   (Q8Y8G1), 
DPS_PORG3   (B2RMG0), DPS_PORGI   (P0C935), DPS_PROHU   (Q6Y1R6), 
DPS_SALA4   (B5F0B0), DPS_SALAR   (A9MIS0), DPS_SALCH   (Q57RC9), 
DPS_SALDC   (B5FP96), DPS_SALEP   (B5QXT6), DPS_SALG2   (B5R797), 
DPS_SALHS   (B4TC86), DPS_SALNS   (B4T089), DPS_SALPA   (Q5PG12), 
DPS_SALPB   (A9MST4), DPS_SALPC   (C0PX17), DPS_SALPK   (B5BBZ6), 
DPS_SALSV   (B4TQX5), DPS_SALTI   (Q8XF78), DPS_SALTY   (Q7CQV9), 
DPS_SHIB3   (B2TVB6), DPS_SHIBS   (Q323Y1), DPS_SHIDS   (Q32I91), 
DPS_SHIFL   (P0ABT4), DPS_SHISS   (Q3Z3X3), DPS_SYNE7   (Q55024), 
FTPA_HAEDU  (Q47953), G20U_BACSU  (P80879), MRGA_BACSU  (P37960), 
TPF1_TREPA  (P16665), TYF1_TREPE  (P17915), Y1349_HAEIN (P45173), 
Y1894_SYNY3 (P73321), Y458_ANAVA  (P0A3A8), Y458_NOSS1  (P0A3A7), 
YBP2_STRAU  (P29714)
» More

UniProtKB/Swiss-Prot
False negative sequences
26 sequences

DPS1_BACAN  (Q8RPQ1), DPS1_DEIRA  (Q9RS64), DPS2_DEIRA  (Q9RZN1), 
DPS_AGRT5   (Q8UCK6), DPS_ERWT9   (B2VBZ3), DPS_HALSA   (Q9HMP7), 
DPS_MYCS2   (A0R692), DPS_MYCSM   (P0C558), DPS_PECAS   (Q6D3H7), 
DPS_PECCP   (C6DEE2), DPS_SERMA   (Q84AP0), DPS_SERP5   (A8GBU5), 
DPS_SODGM   (Q2NUI3), DPS_STRMG   (Q9KWH3), DPS_STRSE   (C5VZF1), 
DPS_STRSU   (P0CB53), DPS_YERE8   (A1JU34), DPS_YERP3   (A7FGU7), 
DPS_YERPA   (Q1C6F4), DPS_YERPB   (B2K7Y0), DPS_YERPE   (Q7CJ65), 
DPS_YERPG   (A9R6H6), DPS_YERPN   (Q1CHU6), DPS_YERPP   (A4TLZ3), 
DPS_YERPS   (Q669E1), DPS_YERPY   (B1JHA1)
» More

UniProtKB/Swiss-Prot
False positive sequences
1 sequence

CEFD1_ACRCH (Q8J0E9)

		
PDB
[Detailed view]
13 PDB

1DPS; 1F30; 1F33; 1JI4; 1JI5; 1N1Q; 1QGH; 2BJY; 2BK6; 2BKC; 2CHP; 2FJC; 2IY4
» More

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