Entry: PS00819

General information about the entry

Entry name [info] DPS_2
Accession [info] PS00819
Entry type [info] PATTERN
Date [info] OCT-1993 (CREATED); JUL-1998 (DATA UPDATE); JUN-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00645

Name and characterization of the entry

Description [info] Dps protein family signature 2.
Pattern [info]
[LIVMFY]-[DH]-x-[LIVM]-[GA]-E-R-x(3)-[LIF]-[GDN]-x(2)-[PA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_08 which contains 551'987 sequence entries.


Total number of hits 74 in 74 different sequences
Number of true positive hits 73 in 73 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 26
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 98.65 %
Recall (true positives / (true positives + false negatives)) 73.74 %

Comments [info]

Taxonomic range [info] Archaea, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
73 sequences

DPS2_BACAN  (Q8RPQ2    ), DPSA_NOSS1  (Q8YQL3    ), DPSA_SYNP6  (Q9R6T3    ), 
DPS_ACIAD   (Q6FCX7    ), DPS_BREBE   (P83695    ), DPS_CITFR   (Q84AP1    ), 
DPS_CITK8   (A8AIW9    ), DPS_CROS8   (A7MEY6    ), DPS_ECO24   (A7ZJM7    ), 
DPS_ECO27   (B7UM08    ), DPS_ECO45   (B7MGS0    ), DPS_ECO55   (B7LC95    ), 
DPS_ECO57   (P0ABT3    ), DPS_ECO5E   (B5YSA4    ), DPS_ECO7I   (B7NNP4    ), 
DPS_ECO81   (B7MQR6    ), DPS_ECO8A   (B7M787    ), DPS_ECOBW   (C4ZXY4    ), 
DPS_ECODH   (B1X7E2    ), DPS_ECOHS   (A7ZY70    ), DPS_ECOL5   (Q0TJN6    ), 
DPS_ECOL6   (Q8FJM0    ), DPS_ECOLC   (B1IXF6    ), DPS_ECOLI   (P0ABT2    ), 
DPS_ECOLU   (B7NAB2    ), DPS_ECOSE   (B6I7W9    ), DPS_ECOSM   (B1LMA4    ), 
DPS_ECOUT   (Q1REB2    ), DPS_ENT38   (A4W8F0    ), DPS_ENTCL   (Q84FI1    ), 
DPS_ESCF3   (B7LMB6    ), DPS_HELPJ   (Q9ZMJ1    ), DPS_HELPY   (P43313    ), 
DPS_KLEP3   (B5XYT2    ), DPS_KLEP7   (A6T6Q6    ), DPS_KLEPN   (Q84FI0    ), 
DPS_KLUCR   (Q6XZR0    ), DPS_LISIN   (P80725    ), DPS_LISMO   (Q8Y8G1    ), 
DPS_PORG3   (B2RMG0    ), DPS_PORGI   (P0C935    ), DPS_PROHU   (Q6Y1R6    ), 
DPS_SALA4   (B5F0B0    ), DPS_SALAR   (A9MIS0    ), DPS_SALCH   (Q57RC9    ), 
DPS_SALDC   (B5FP96    ), DPS_SALEP   (B5QXT6    ), DPS_SALG2   (B5R797    ), 
DPS_SALHS   (B4TC86    ), DPS_SALNS   (B4T089    ), DPS_SALPA   (Q5PG12    ), 
DPS_SALPB   (A9MST4    ), DPS_SALPC   (C0PX17    ), DPS_SALPK   (B5BBZ6    ), 
DPS_SALSV   (B4TQX5    ), DPS_SALTI   (Q8XF78    ), DPS_SALTY   (Q7CQV9    ), 
DPS_SHIB3   (B2TVB6    ), DPS_SHIBS   (Q323Y1    ), DPS_SHIDS   (Q32I91    ), 
DPS_SHIFL   (P0ABT4    ), DPS_SHISS   (Q3Z3X3    ), DPS_SYNE7   (Q55024    ), 
FTPA_HAEDU  (Q47953    ), G20U_BACSU  (P80879    ), MRGA_BACSU  (P37960    ), 
TPF1_TREPA  (P16665    ), TYF1_TREPE  (P17915    ), Y1349_HAEIN (P45173    ), 
Y1894_SYNY3 (P73321    ), Y458_ANAVA  (P0A3A8    ), Y458_NOSS1  (P0A3A7    ), 
YBP2_STRAU  (P29714    )
» more

UniProtKB/Swiss-Prot
False negative sequences
26 sequences

DPS1_BACAN  (Q8RPQ1    ), DPS1_DEIRA  (Q9RS64    ), DPS2_DEIRA  (Q9RZN1    ), 
DPS_AGRFC   (Q8UCK6    ), DPS_ERWT9   (B2VBZ3    ), DPS_HALSA   (Q9HMP7    ), 
DPS_MYCS2   (A0R692    ), DPS_MYCSM   (P0C558    ), DPS_PECAS   (Q6D3H7    ), 
DPS_PECCP   (C6DEE2    ), DPS_SERMA   (Q84AP0    ), DPS_SERP5   (A8GBU5    ), 
DPS_SODGM   (Q2NUI3    ), DPS_STRMG   (Q9KWH3    ), DPS_STRSE   (C5VZF1    ), 
DPS_STRSU   (P0CB53    ), DPS_YERE8   (A1JU34    ), DPS_YERP3   (A7FGU7    ), 
DPS_YERPA   (Q1C6F4    ), DPS_YERPB   (B2K7Y0    ), DPS_YERPE   (Q7CJ65    ), 
DPS_YERPG   (A9R6H6    ), DPS_YERPN   (Q1CHU6    ), DPS_YERPP   (A4TLZ3    ), 
DPS_YERPS   (Q669E1    ), DPS_YERPY   (B1JHA1    )
» more

UniProtKB/Swiss-Prot
False positive sequences
1 sequence

CEFD1_ACRCH (Q8J0E9    )

		
PDB
[Detailed view]
13 PDB

1DPS; 1F30; 1F33; 1JI4; 1JI5; 1N1Q; 1QGH; 2BJY; 2BK6; 2BKC; 2CHP; 2FJC; 2IY4
» more

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission