Entry: PS00840

General information about the entry
Entry name SUMT_2
Accession number PS00840
Entry type PATTERN
Date OCT-1993 (CREATED); DEC-2004 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00656
Name and characterization of the entry
DescriptionUroporphyrin-III C-methyltransferase signature 2.
Pattern [VW]-x(2)-[LI]-x(2)-[GA]-[DT]-x(3)-[FYW]-[GS]-x(8)-[LIVFA]-x(5,6)- [LIVMFYWPAC]-x-[LIVMY]-x-[PN]-G.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 164 hits in 164 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 164 hits in 164 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 5
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 97.04 %
Comments
  • Taxonomic range: Archaea, Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
CBIF_METJA  (Q58973), CBIF_SALTI  (P0A2H0), CBIF_SALTY  (P0A2G9), 
CBIL_METJA  (Q58181), CBIL_SALTY  (Q05593), COBIJ_MYCBO (P66878), 
COBIJ_MYCTU (P66877), COBI_PSEDE  (P21639), COBM_MYCTU  (Q10672), 
COBM_PSEDE  (P21922), COBM_RHOCB  (O68100), COBM_RHOER  (Q53138), 
CYSG1_AERHH (A0KLD7), CYSG1_AERS4 (A4SHL4), CYSG1_CROS8 (A7MJ67), 
CYSG1_ERWCT (Q6D1A4), CYSG1_HALHL (A1WWP8), CYSG1_KLEP7 (A6TD45), 
CYSG1_SERP5 (A8G9Y3), CYSG1_YERE8 (A1JJS8), CYSG1_YERP3 (A7FLY4), 
CYSG1_YERPN (Q1CLS2), CYSG1_YERPP (A4TGU8), CYSG1_YERPS (Q66EC9), 
CYSG2_AERHH (A0KP37), CYSG2_AERS4 (A4SRH0), CYSG2_CROS8 (A7MKK9), 
CYSG2_ERWCT (Q6CZS0), CYSG2_KLEP7 (A6TF07), CYSG2_SERP5 (A8GKQ1), 
CYSG2_YERE8 (A1JSB7), CYSG2_YERP3 (A7FNS9), CYSG2_YERPN (Q1CCP6), 
CYSG2_YERPP (A4TPZ1), CYSG2_YERPS (Q664M6), CYSG3_AERHH (A0KQJ4), 
CYSG_ACIAD  (Q6F8G6), CYSG_ACTP7  (B3GZA0), CYSG_ACTPJ  (B0BTC2), 
CYSG_ACTSZ  (A6VPZ6), CYSG_ALCBS  (Q0VQ05), CYSG_ALHEH  (Q0A812), 
CYSG_AZOVD  (C1DKY7), CYSG_BAUCH  (Q1LTP4), CYSG_BLOFL  (Q7VQG9), 
CYSG_BLOPB  (Q493N1), CYSG_BORA1  (Q2KWB0), CYSG_BORBR  (Q7WMM4), 
CYSG_BORPA  (Q7WB57), CYSG_BORPD  (A9HZV6), CYSG_BORPE  (Q7VZ77), 
CYSG_BUCAI  (P57500), CYSG_CHRVO  (Q7NZV7), CYSG_CITK8  (A8AQS4), 
CYSG_ECO24  (A7ZSP4), CYSG_ECO27  (B7UK79), CYSG_ECO45  (B7MCY5), 
CYSG_ECO55  (B7L4P2), CYSG_ECO57  (P0AEA9), CYSG_ECO5E  (B5YTS6), 
CYSG_ECO7I  (B7NMD7), CYSG_ECO81  (B7N1F1), CYSG_ECO8A  (B7M1S1), 
CYSG_ECOBW  (C4ZUM4), CYSG_ECODH  (B1X716), CYSG_ECOHS  (A8A5H5), 
CYSG_ECOK1  (A1AGQ2), CYSG_ECOL5  (Q0TC92), CYSG_ECOL6  (Q8FCW8), 
CYSG_ECOLC  (B1IP96), CYSG_ECOLI  (P0AEA8), CYSG_ECOLU  (B7NDX8), 
CYSG_ECOSE  (B6I2S7), CYSG_ECOSM  (B1LHG9), CYSG_ECOUT  (Q1R5R3), 
CYSG_EDWI9  (C5BGP8), CYSG_ENT38  (A4WFH1), CYSG_ESCF3  (B7LS75), 
CYSG_GLUDA  (A9H259), CYSG_GLUOX  (Q5FP95), CYSG_HAHCH  (Q2SJB7), 
CYSG_MANSM  (Q65T49), CYSG_METCA  (Q606C9), CYSG_METFK  (Q1H3L5), 
CYSG_NEIM0  (A9LZ77), CYSG_NEIMA  (P57001), CYSG_NEIMB  (P95370), 
CYSG_NEIMF  (A1KU10), CYSG_NITEC  (Q0AHC1), CYSG_NITEU  (Q820Q4), 
CYSG_NITMU  (Q2Y6L7), CYSG_NITOC  (Q3JCS0), CYSG_PHOLL  (Q7N8L2), 
CYSG_PHOPR  (Q6LM67), CYSG_PSE14  (Q48H75), CYSG_PSEA6  (Q15YU1), 
CYSG_PSEA7  (A6V4H6), CYSG_PSEA8  (B7UW11), CYSG_PSEAB  (Q02NA3), 
CYSG_PSEAE  (Q9I0M7), CYSG_PSEE4  (Q1IBC9), CYSG_PSEF5  (Q4K9V8), 
CYSG_PSEFS  (C3JY53), CYSG_PSEHT  (Q3ILQ9), CYSG_PSEMY  (A4XUX3), 
CYSG_PSEP1  (A5W1H7), CYSG_PSEPF  (Q3KA85), CYSG_PSEPK  (Q88FT3), 
CYSG_PSEPW  (B1JBD9), CYSG_PSESM  (Q87ZT0), CYSG_PSEU2  (Q4ZRL6), 
CYSG_PSEU5  (A4VLU6), CYSG_PSYA2  (Q4FSU1), CYSG_PSYCK  (Q1QAX7), 
CYSG_PSYIN  (A1SRP9), CYSG_PSYWF  (A5WEG6), CYSG_RUTMC  (A1AVU5), 
CYSG_SACD2  (Q21K21), CYSG_SALA4  (B5F8J0), CYSG_SALAR  (A9MME5), 
CYSG_SALCH  (Q57IZ5), CYSG_SALDC  (B5FJQ1), CYSG_SALEP  (B5R2C7), 
CYSG_SALG2  (B5R7N6), CYSG_SALHS  (B4TKQ4), CYSG_SALNS  (B4SVI1), 
CYSG_SALPA  (Q5PLV8), CYSG_SALPB  (A9MT45), CYSG_SALPC  (C0Q0F3), 
CYSG_SALPK  (B5BH22), CYSG_SALSV  (B4TY38), CYSG_SALTI  (Q8Z201), 
CYSG_SALTY  (P25924), CYSG_SHIB3  (B2U3H4), CYSG_SHIBS  (Q31VS0), 
CYSG_SHIDS  (Q32AZ8), CYSG_SHIF8  (Q0SZU8), CYSG_SHIFL  (Q83JB3), 
CYSG_SHISS  (Q3YWQ3), CYSG_THICR  (Q31GG8), CYSG_THISH  (B8GUD3), 
CYSG_TOLAT  (C4LAG5), CYSG_VESOH  (A5CXE4), CYSG_XYLF2  (B2I985), 
CYSG_XYLFA  (Q9PF46), CYSG_XYLFM  (B0U4X0), CYSG_XYLFT  (Q87AI5), 
CYSG_YERPA  (Q1C2P9), CYSG_YERPE  (Q74Y23), CYSG_ZYMMO  (Q5NRM4), 
HEM4_CLOJO  (Q59294), NASF_BACSU  (P42437), NIRE_PARDP  (Q51701), 
SUMT_BACME  (P29928), SUMT_BACSU  (O34744), SUMT_CYACA  (O19889), 
SUMT_METIV  (P29564), SUMT_METJA  (Q58375), SUMT_PSEDE  (P21631), 
SUMT_PSEFL  (P37725), SUMT_SCHPO  (O74468), SUMT_SYNE7  (P42451), 
SUMT_SYNY3  (Q55749), SUMT_YEAST  (P36150)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
COBI_PSEAE  (Q9HZU3), CYSG2_HALHL (A1WYD5), CYSG_SODGM  (Q2NVN0), 
CYSG_THIDA  (Q3SG32), SUMT_PSEAE  (Q9I2W4)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]
1PJQ; 1PJS; 1PJT; 1S4D; 3NDC; 3NEI;

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission


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