Entry: PS00845

General information about the entry

Entry name [info] CAP_GLY_1
Accession [info] PS00845
Entry type [info] PATTERN
Date [info] 01-OCT-1993 CREATED; 01-APR-2006 DATA UPDATE; 05-JUL-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00660

Name and characterization of the entry

Description [info] CAP-Gly domain signature.
Pattern [info] 
[GD]-x(0,10)-[FYWA]-x(0,1)-G-[LIVM]-x(0,2)-[LIVMFYD]-x(0,7)-G-[KN]-[NHW]-
x(0,1)-G-[STARCV]-x(0,2)-[GD]-x(0,2)-[LY]-[FC].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_07 which contains 555'100 sequence entries.


Total number of hits 67 in 53 different sequences
Number of true positive hits 66 in 52 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 2
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 98.51 %
Recall (true positives / (true positives + false negatives)) 97.06 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 2
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 52 sequences 

ALP11_SCHPO (Q10235    ), BIK1_YEAST  (P11709    ), CE350_HUMAN (Q5VT06    ), 

CE350_MOUSE (E9Q309    ), CL190_DROME (Q9VJE5    ), CLIP1_CHICK (O42184    ), 
CLIP1_HUMAN (P30622    ), CLIP1_MOUSE (Q922J3    ), CLIP1_RAT   (Q9JK25    ), 
CLIP2_HUMAN (Q9UDT6    ), CLIP2_MOUSE (Q9Z0H8    ), CLIP2_RAT   (O55156    ), 
CLIP3_HUMAN (Q96DZ5    ), CLIP3_MOUSE (B9EHT4    ), CLIP3_PONAB (Q5R686    ), 
CLIP3_XENLA (Q5U243    ), CLIP4_HUMAN (Q8N3C7    ), CLIP4_MOUSE (Q8CI96    ), 
CLIP4_RAT   (Q66HD5    ), CLP1H_CAEEL (P34531    ), CYLD_BOVIN  (Q1RMU2    ), 
CYLD_HUMAN  (Q9NQC7    ), CYLD_MOUSE  (Q80TQ2    ), CYLD_PONAB  (Q5RED8    ), 
CYLD_RAT    (Q66H62    ), DCTN1_CHICK (P35458    ), DCTN1_DROME (P13496    ), 
DCTN1_HUMAN (Q14203    ), DCTN1_MOUSE (O08788    ), DCTN1_RAT   (P28023    ), 
DCTN1_XENLA (Q6PCJ1    ), DYNA_NEUCR  (Q01397    ), KI13B_HUMAN (Q9NQT8    ), 
NIP80_YEAST (P33420    ), PAC2_YEAST  (P39937    ), SSM4_SCHPO  (O42667    ), 
TBCB_BOVIN  (Q5E951    ), TBCB_CAEEL  (Q20728    ), TBCB_DICDI  (Q54Z01    ), 
TBCB_HUMAN  (Q99426    ), TBCB_MOUSE  (Q9D1E6    ), TBCB_YEAST  (P53904    ), 
TBCE_ARATH  (Q8GRL7    ), TBCE_BOVIN  (Q32KS0    ), TBCE_DANRE  (Q5U378    ), 
TBCE_DICDI  (Q55CN0    ), TBCE_HUMAN  (Q15813    ), TBCE_MOUSE  (Q8CIV8    ), 
TBCE_PONAB  (Q5RBD9    ), TBCE_RAT    (Q5FVQ9    ), TBCE_XENLA  (Q5U508    ), 
TIP1_SCHPO  (P79065    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 2 sequences 

TBCB_ARATH  (Q67Z52    ), TBCE_DROME  (A1Z6J5    )


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			1 sequence
			


			
YETA_BACSU  (O31530    )


				
	

	

		PDB
[Detailed view]		
		
			31 PDB
			


			1LPL; 1TOV; 1TXQ; 1WHG; 1WHH; 1WHK; 1WHM; 2COW; 2COY; 2COZ; 2CP0; 2CP2; 
			
				2CP3; 2CP5; 2CP6; 2CP7; 2E3H; 2E3I; 2E4H; 2HKN; 2HKQ; 2HL3; 2HL5; 2HQH; 
				2M02; 2MPX; 2QK0; 2Z0W; 3E2U; 3RDV; 3TQ7
			
			

			» more

				
	





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