Entry: PS00846

General information about the entry

Entry name [info] HTH_ARSR_1
Accession [info] PS00846
Entry type [info] PATTERN
Date [info] OCT-1993 (CREATED); NOV-1995 (DATA UPDATE); MAY-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00661

Name and characterization of the entry

Description [info] Bacterial regulatory proteins, arsR family signature.
Pattern [info]
C-x(2)-D-[LIVM]-x(6)-[ST]-x(4)-S-[HYR]-[HQ].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_06 which contains 551'385 sequence entries.


Total number of hits 15 in 15 different sequences
Number of true positive hits 14 in 14 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 34
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 93.33 %
Recall (true positives / (true positives + false negatives)) 29.17 %

Comments [info]

Taxonomic range [info] Archaea, Prokaryotes (Bacteria), Eukaryotic viruses
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
14 sequences

ARSR1_ECOLX (P15905    ), ARSR2_ECOLX (P52144    ), ARSR_BACSU  (P45949    ), 
ARSR_ECOLI  (P37309    ), ARSR_STAAU  (P30338    ), ARSR_STAXY  (Q01256    ), 
CADC_BACPE  (P30339    ), CADC_LACLL  (P0A4U3    ), CADC_LISIN  (P0A4U2    ), 
CADC_LISMN  (Q56405    ), CADC_STAAU  (P20047    ), CADF_STAAU  (P37374    ), 
SMTB_SYNE7  (P30340    ), ZIAR_SYNY3  (Q55940    )
» more

UniProtKB/Swiss-Prot
False negative sequences
34 sequences

ASER_BACSU  (P96677    ), B115_SSV1   (P0C7L5    ), BIGR_AGRFC  (Q8UAA8    ), 
BIGR_XYLFA  (Q9PFB1    ), BIGR_XYLFT  (Q87AD5    ), CMTR_MYCBO  (P67732    ), 
CMTR_MYCTO  (P9WMI8    ), CMTR_MYCTU  (P9WMI9    ), CZRA_BACSU  (O31844    ), 
HLYU_VIBCH  (P52695    ), HTHAR_MYCTU (O53478    ), KMTR_MYCTU  (O53838    ), 
MERR_STRLI  (P30346    ), NMTR_MYCTU  (O69711    ), NOLR_RHIML  (P28267    ), 
PAGR_BACAN  (O31178    ), SDPR_BACSU  (O32242    ), SMTB_MYCTO  (P9WMI4    ), 
SMTB_MYCTU  (P9WMI5    ), Y0081_MYCTO (P9WMI6    ), Y0081_MYCTU (P9WMI7    ), 
Y1325_METJA (Q58721    ), Y1398_METJA (Q58793    ), Y1553_METJA (Q58948    ), 
Y1563_METJA (Q58958    ), Y229_METJA  (Q57682    ), Y361_METJA  (Q57807    ), 
Y774_METJA  (Q58184    ), YBZH_BACSU  (C0H3S9    ), YCEK_BACSU  (O34464    ), 
YCZG_BACSU  (O31480    ), YDFF_BACSU  (P96683    ), YGAV_ECOLI  (P77295    ), 
YUZN_BACSU  (C0H3Q8    )
» more

UniProtKB/Swiss-Prot
False positive sequences
1 sequence

CECR6_MOUSE (Q99MX7    )

		
PDB
[Detailed view]
5 PDB

1R1T; 1R23; 1SMT; 1U2W; 3F72

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