Entry: PS00846

General information about the entry

Entry name [info] HTH_ARSR_1
Accession [info] PS00846
Entry type [info] PATTERN
Date [info] OCT-1993 (CREATED); NOV-1995 (DATA UPDATE); JUN-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00661

Name and characterization of the entry

Description [info] Bacterial regulatory proteins, arsR family signature.
Pattern [info]
C-x(2)-D-[LIVM]-x(6)-[ST]-x(4)-S-[HYR]-[HQ].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_08 which contains 320'201 sequence entries.


Total number of hits 15 in 15 different sequences
Number of true positive hits 14 in 14 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 34
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 93.33 %
Recall (true positives / (true positives + false negatives)) 29.17 %

Comments [info]

Taxonomic range [info] Archaea, Prokaryotes (Bacteria), Eukaryotic viruses
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
14 sequences

ARSR1_ECOLX (P15905), ARSR2_ECOLX (P52144), ARSR_BACSU  (P45949), 
ARSR_ECOLI  (P37309), ARSR_STAAU  (P30338), ARSR_STAXY  (Q01256), 
CADC_BACPE  (P30339), CADC_LACLL  (P0A4U3), CADC_LISIN  (P0A4U2), 
CADC_LISMN  (Q56405), CADC_STAAU  (P20047), CADF_STAAU  (P37374), 
SMTB_SYNE7  (P30340), ZIAR_SYNY3  (Q55940)
» More

UniProtKB/Swiss-Prot
False negative sequences
34 sequences

ASER_BACSU  (P96677), B115_SSV1   (P0C7L5), BIGR_AGRFC  (Q8UAA8), 
BIGR_XYLFA  (Q9PFB1), BIGR_XYLFT  (Q87AD5), CMTR_MYCBO  (P67732), 
CMTR_MYCTO  (P9WMI8), CMTR_MYCTU  (P9WMI9), CZRA_BACSU  (O31844), 
HLYU_VIBCH  (P52695), HTHAR_MYCTU (O53478), KMTR_MYCTU  (O53838), 
MERR_STRLI  (P30346), NMTR_MYCTU  (O69711), NOLR_RHIML  (P28267), 
PAGR_BACAN  (O31178), SDPR_BACSU  (O32242), SMTB_MYCTO  (P9WMI4), 
SMTB_MYCTU  (P9WMI5), Y0081_MYCTO (P9WMI6), Y0081_MYCTU (P9WMI7), 
Y1325_METJA (Q58721), Y1398_METJA (Q58793), Y1553_METJA (Q58948), 
Y1563_METJA (Q58958), Y229_METJA  (Q57682), Y361_METJA  (Q57807), 
Y774_METJA  (Q58184), YBZH_BACSU  (C0H3S9), YCEK_BACSU  (O34464), 
YCZG_BACSU  (O31480), YDFF_BACSU  (P96683), YGAV_ECOLI  (P77295), 
YUZN_BACSU  (C0H3Q8)
» More

UniProtKB/Swiss-Prot
False positive sequences
1 sequence

CECR6_MOUSE (Q99MX7)

		
PDB
[Detailed view]
5 PDB

1R1T; 1R23; 1SMT; 1U2W; 3F72

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