Entry: PS00846

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General information about the entry

Entry name [info] HTH_ARSR_1
Accession [info] PS00846
Entry type [info] PATTERN
Date [info] OCT-1993 (CREATED); NOV-1995 (DATA UPDATE); JUN-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00661

Name and characterization of the entry

Description [info] Bacterial regulatory proteins, arsR family signature.
Pattern [info]
C-x(2)-D-[LIVM]-x(6)-[ST]-x(4)-S-[HYR]-[HQ].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_07 which contains 546'000 sequence entries.


Total number of hits 15 in 15 different sequences
Number of true positive hits 14 in 14 different sequences
Number of 'unknown' hits
Number of false positive hits 1
Number of false negative sequences 34
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 93.33 %
Recall (true positives / (true positives + false negatives)) 29.17 %

Comments [info]

Taxonomic range [info] Archaea, Prokaryotes (Bacteria), Eukaryotic viruses
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
14 sequences

ARSR1_ECOLX (P15905), ARSR2_ECOLX (P52144), ARSR_BACSU  (P45949), 
ARSR_ECOLI  (P37309), ARSR_STAAU  (P30338), ARSR_STAXY  (Q01256), 
CADC_BACPE  (P30339), CADC_LACLL  (P0A4U3), CADC_LISIN  (P0A4U2), 
CADC_LISMN  (Q56405), CADC_STAAU  (P20047), CADF_STAAU  (P37374), 
SMTB_SYNE7  (P30340), ZIAR_SYNY3  (Q55940)
» More

UniProtKB/Swiss-Prot
False negative sequences
34 sequences

ASER_BACSU  (P96677), B115_SSV1   (P0C7L5), BIGR_AGRT5  (Q8UAA8), 
BIGR_XYLFA  (Q9PFB1), BIGR_XYLFT  (Q87AD5), CMTR_MYCBO  (P67732), 
CMTR_MYCTO  (P9WMI8), CMTR_MYCTU  (P9WMI9), CZRA_BACSU  (O31844), 
HLYU_VIBCH  (P52695), HTHAR_MYCTU (O53478), KMTR_MYCTU  (O53838), 
MERR_STRLI  (P30346), NMTR_MYCTU  (O69711), NOLR_RHIML  (P28267), 
PAGR_BACAN  (O31178), SDPR_BACSU  (O32242), SMTB_MYCTO  (P9WMI4), 
SMTB_MYCTU  (P9WMI5), Y0081_MYCTO (P9WMI6), Y0081_MYCTU (P9WMI7), 
Y1325_METJA (Q58721), Y1398_METJA (Q58793), Y1553_METJA (Q58948), 
Y1563_METJA (Q58958), Y229_METJA  (Q57682), Y361_METJA  (Q57807), 
Y774_METJA  (Q58184), YBZH_BACSU  (C0H3S9), YCEK_BACSU  (O34464), 
YCZG_BACSU  (O31480), YDFF_BACSU  (P96683), YGAV_ECOLI  (P77295), 
YUZN_BACSU  (C0H3Q8)
» More

UniProtKB/Swiss-Prot
False positive sequences
1 sequence

CECR6_MOUSE (Q99MX7)

		
PDB
[Detailed view]
5 PDB

1R1T; 1R23; 1SMT; 1U2W; 3F72

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