Entry: PS00868

General information about the entry

Entry name [info] CYS_MET_METAB_PP
Accession [info] PS00868
Entry type [info] PATTERN
Date [info] OCT-1993 (CREATED); DEC-2004 (DATA UPDATE); JUN-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00677

Name and characterization of the entry

Description [info] Cys/Met metabolism enzymes pyridoxal-phosphate attachment site.
Pattern [info]
[DQ]-[LIVMFY]-x(3)-[STAGCN]-[STAGCIL]-T-K-[FYWQI]-[LIVMF]-x-G-[HQD]-
[SGNH].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_08 which contains 320'201 sequence entries.


Total number of hits 46 in 46 different sequences
Number of true positive hits 46 in 46 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 4
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 92.00 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] pyridoxal_phosphate at position 6
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
46 sequences

CBL_NEUCR   (Q1K8G0), CBL_SCHPO   (O94350), CGL2_CAEEL  (P55216), 
CGL_HUMAN   (P32929), CGL_MACFA   (Q60HG7), CGL_MOUSE   (Q8VCN5), 
CGL_PIG     (Q19QT7), CGL_RAT     (P18757), CGS1_ARATH  (P55217), 
CGS2_ARATH  (Q9C876), CYS3_YEAST  (P31373), CYSA_STRCO  (Q59829), 
CYSD_EMENI  (P50125), CYSD_SCHPO  (O13326), MCCB_BACSU  (O05394), 
MEGL_PSEPU  (P13254), MET17_KLULA (Q92441), MET17_YEAST (P06106), 
MET7_SCHPO  (O74314), MET7_YEAST  (P47164), METB_ECOLI  (P00935), 
METB_HAEIN  (P44502), METB_HELPJ  (Q9ZMW7), METB_HELPX  (Q1M0P5), 
METB_HELPY  (P56069), METB_HERAU  (P24601), METB_MYCBO  (P66876), 
METB_MYCLE  (P46807), METB_MYCTO  (P9WGB6), METB_MYCTU  (P9WGB7), 
METC_ARATH  (P53780), METC_BACSU  (O31632), METC_BORAV  (Q07703), 
METC_COXBU  (Q83A83), METC_ECOLI  (P06721), METC_HAEIN  (P44527), 
METC_LACLA  (P0A4K2), METC_LACLC  (P0C2T9), METC_LACLM  (A2RM21), 
METC_SALTY  (P18949), METC_YEAST  (P43623), METI_BACSU  (O31631), 
METZ_PSEAE  (P55218), STR3_YEAST  (P53101), YFHE_SCHPO  (O42851), 
YHR2_YEAST  (P38716)
» More

UniProtKB/Swiss-Prot
False negative sequences
4 sequences

METC_RHIL3  (Q52811), METZ_MYCTO  (P9WGB4), METZ_MYCTU  (P9WGB5), 
MGL_ARATH   (Q9SGU9)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

METC_CRYLA  (P85217)

		
PDB
[Detailed view]
11 PDB

1CL2; 1IBJ; 1N8P; 1PG8; 2FQ6; 2GQN; 2NMP; 3COG; 3ELP; 4ITX; 4L0O

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