Entry: PS00868

General information about the entry

Entry name [info] CYS_MET_METAB_PP
Accession [info] PS00868
Entry type [info] PATTERN
Date [info] OCT-1993 (CREATED); DEC-2004 (DATA UPDATE); APR-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00677

Name and characterization of the entry

Description [info] Cys/Met metabolism enzymes pyridoxal-phosphate attachment site.
Pattern [info]
[DQ]-[LIVMFY]-x(3)-[STAGCN]-[STAGCIL]-T-K-[FYWQI]-[LIVMF]-x-G-[HQD]-
[SGNH].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_06 which contains 548'586 sequence entries.


Total number of hits 46 in 46 different sequences
Number of true positive hits 46 in 46 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 4
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 92.00 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] pyridoxal_phosphate at position 6
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
46 sequences

CBL_NEUCR   (Q1K8G0), CBL_SCHPO   (O94350), CGL2_CAEEL  (P55216), 
CGL_HUMAN   (P32929), CGL_MACFA   (Q60HG7), CGL_MOUSE   (Q8VCN5), 
CGL_PIG     (Q19QT7), CGL_RAT     (P18757), CGS1_ARATH  (P55217), 
CGS2_ARATH  (Q9C876), CYS3_YEAST  (P31373), CYSA_STRCO  (Q59829), 
CYSD_EMENI  (P50125), CYSD_SCHPO  (O13326), MCCB_BACSU  (O05394), 
MEGL_PSEPU  (P13254), MET17_KLULA (Q92441), MET17_YEAST (P06106), 
MET7_SCHPO  (O74314), MET7_YEAST  (P47164), METB_ECOLI  (P00935), 
METB_HAEIN  (P44502), METB_HELPJ  (Q9ZMW7), METB_HELPX  (Q1M0P5), 
METB_HELPY  (P56069), METB_HERAU  (P24601), METB_MYCBO  (P66876), 
METB_MYCLE  (P46807), METB_MYCTO  (P9WGB6), METB_MYCTU  (P9WGB7), 
METC_ARATH  (P53780), METC_BACSU  (O31632), METC_BORAV  (Q07703), 
METC_COXBU  (Q83A83), METC_ECOLI  (P06721), METC_HAEIN  (P44527), 
METC_LACLA  (P0A4K2), METC_LACLC  (P0C2T9), METC_LACLM  (A2RM21), 
METC_SALTY  (P18949), METC_YEAST  (P43623), METI_BACSU  (O31631), 
METZ_PSEAE  (P55218), STR3_YEAST  (P53101), YFHE_SCHPO  (O42851), 
YHR2_YEAST  (P38716)
» More

UniProtKB/Swiss-Prot
False negative sequences
4 sequences

METC_RHIL3  (Q52811), METZ_MYCTO  (P9WGB4), METZ_MYCTU  (P9WGB5), 
MGL_ARATH   (Q9SGU9)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

METC_CRYLA  (P85217)

		
PDB
[Detailed view]
11 PDB

1CL2; 1IBJ; 1N8P; 1PG8; 2FQ6; 2GQN; 2NMP; 3COG; 3ELP; 4ITX; 4L0O

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