Entry: PS00871

General information about the entry

Entry name [info] CLPAB_2
Accession [info] PS00871
Entry type [info] PATTERN
Date [info] OCT-1993 (CREATED); DEC-2004 (DATA UPDATE); MAY-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00679

Name and characterization of the entry

Description [info] Chaperonins clpA/B signature 2.
Pattern [info]
[RGT]-[LIVMFY]-[DN]-x-[ST]-E-[LIVMFY]-x-[ED]-[KRQEAS]-x-[STA]-x-[STAD]-
[KRS]-[LIVM]-x-G-[STAP].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_05 which contains 551'193 sequence entries.


Total number of hits 192 in 192 different sequences
Number of true positive hits 191 in 191 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 13
Number of 'partial' sequences 4
Precision (true positives / (true positives + false positives)) 99.48 %
Recall (true positives / (true positives + false negatives)) 93.63 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
191 sequences

CLPAA_SOLLC (P31541    ), CLPAB_SOLLC (P31542    ), CLPA_BRANA  (P46523    ), 
CLPA_ECO57  (P0ABI1    ), CLPA_ECOL6  (P0ABI0    ), CLPA_ECOLI  (P0ABH9    ), 
CLPA_RHOBL  (P05444    ), CLPB1_ARATH (P42730    ), CLPB1_CHLTE (Q8KG79    ), 
CLPB1_NOSS1 (Q8YUL9    ), CLPB1_ORYSJ (Q6F2Y7    ), CLPB1_STRAW (Q82EU9    ), 
CLPB1_SYNE7 (P53533    ), CLPB1_SYNPX (Q7U637    ), CLPB1_SYNY3 (P74459    ), 
CLPB1_THEEB (Q8DJ40    ), CLPB2_NOSS1 (Q8YM56    ), CLPB2_ORYSJ (Q75GT3    ), 
CLPB2_STRAW (Q826F2    ), CLPB2_SYNE7 (O34209    ), CLPB2_SYNPX (Q7U3T3    ), 
CLPB2_SYNY3 (P74361    ), CLPB2_THEEB (Q8DG71    ), CLPB3_ARATH (Q9LF37    ), 
CLPB4_ARATH (Q8VYJ7    ), CLPB_AGRFC  (Q7CU92    ), CLPB_AQUAE  (O67588    ), 
CLPB_BACAN  (Q81TT4    ), CLPB_BACC1  (Q73BY1    ), CLPB_BACCR  (Q81GM5    ), 
CLPB_BACTN  (Q89YY3    ), CLPB_BDEBA  (Q6MIV0    ), CLPB_BIFLO  (Q8G4X4    ), 
CLPB_BLOFL  (Q7VQF3    ), CLPB_BORBR  (Q7WHB6    ), CLPB_BORPA  (Q7W9E6    ), 
CLPB_BORPE  (Q7VYV6    ), CLPB_BRADU  (Q89UL2    ), CLPB_BRUME  (Q8YJ91    ), 
CLPB_BRUSU  (Q7CEG6    ), CLPB_CAMJE  (Q9PI02    ), CLPB_CAUCR  (Q9A9T4    ), 
CLPB_CHLCV  (Q822Q4    ), CLPB_CHLMU  (Q9PKS5    ), CLPB_CHLPN  (Q7AJA9    ), 
CLPB_CHLTR  (O84115    ), CLPB_CHRVO  (Q7NWN7    ), CLPB_CLOAB  (Q97KG0    ), 
CLPB_CLOPE  (Q8XKG8    ), CLPB_CLOTE  (Q898C7    ), CLPB_CORDI  (Q6NF05    ), 
CLPB_COREF  (Q8FM94    ), CLPB_CORGL  (P53532    ), CLPB_COXBU  (Q83F55    ), 
CLPB_DEIRA  (Q9RVI3    ), CLPB_DESVH  (Q72AW6    ), CLPB_DICNO  (P17422    ), 
CLPB_ECO57  (P63285    ), CLPB_ECOL6  (P63286    ), CLPB_ECOLI  (P63284    ), 
CLPB_ENTFA  (Q831Y7    ), CLPB_FUSNN  (Q8RHQ8    ), CLPB_GEOSL  (Q74FF1    ), 
CLPB_GLOVI  (Q7NFE9    ), CLPB_HAEDU  (Q7VNH1    ), CLPB_HAEIN  (P44403    ), 
CLPB_HELHP  (Q7VJY3    ), CLPB_HELPJ  (Q9ZMH1    ), CLPB_HELPY  (P71404    ), 
CLPB_LACLA  (Q9CFF3    ), CLPB_LACLM  (O68185    ), CLPB_LACPL  (Q88VX7    ), 
CLPB_LEPBY  (O87444    ), CLPB_LEPIC  (Q72QU2    ), CLPB_LEPIN  (Q8F509    ), 
CLPB_LISIN  (Q929G7    ), CLPB_LISM4  (G2K265    ), CLPB_LISMF  (Q71XF9    ), 
CLPB_LISMO  (Q8Y570    ), CLPB_MEIRU  (Q7X2S8    ), CLPB_MYCBO  (P63287    ), 
CLPB_MYCGA  (Q7NAZ3    ), CLPB_MYCGE  (P47597    ), CLPB_MYCLE  (Q9CB26    ), 
CLPB_MYCPA  (Q73T66    ), CLPB_MYCPE  (Q8EW28    ), CLPB_MYCPN  (P75247    ), 
CLPB_MYCTO  (P9WPD0    ), CLPB_MYCTU  (P9WPD1    ), CLPB_NEIMA  (Q9JTP9    ), 
CLPB_NEIMB  (Q9JYQ8    ), CLPB_NITEU  (Q82SD8    ), CLPB_OCEIH  (Q8EU05    ), 
CLPB_PARUW  (Q6MD97    ), CLPB_PASMU  (Q9CKC0    ), CLPB_PHOLL  (Q7N788    ), 
CLPB_PHOPR  (Q6LMY0    ), CLPB_PORGI  (Q7MVE7    ), CLPB_PROFC  (Q7WSY8    ), 
CLPB_PROMA  (Q7VBL0    ), CLPB_PROMM  (Q7V8B1    ), CLPB_PROMP  (Q7V2A3    ), 
CLPB_PSEAE  (Q9HVN5    ), CLPB_PSEPK  (Q88Q71    ), CLPB_PSESM  (Q889C2    ), 
CLPB_RALSO  (Q8XZR0    ), CLPB_RHILO  (Q98G96    ), CLPB_RHIME  (Q92MK7    ), 
CLPB_RHOBA  (Q7UM33    ), CLPB_RHOPA  (Q6N1H2    ), CLPB_RICBR  (Q1RGR1    ), 
CLPB_RICCN  (Q92JK8    ), CLPB_RICFE  (Q4UN57    ), CLPB_RICPR  (Q9ZEA9    ), 
CLPB_RICTY  (Q68XR2    ), CLPB_SALTI  (Q7AMH5    ), CLPB_SALTY  (Q7CQ01    ), 
CLPB_SHEON  (Q8EBE6    ), CLPB_SHIFL  (Q7UBW5    ), CLPB_STAAC  (Q5HHB0    ), 
CLPB_STAAM  (Q99VB5    ), CLPB_STAAN  (Q7A6G6    ), CLPB_STAAR  (Q6GIB2    ), 
CLPB_STAAS  (Q6GAV1    ), CLPB_STAAW  (Q8NXE7    ), CLPB_STAEQ  (Q5HQI5    ), 
CLPB_STAES  (Q8CPT5    ), CLPB_STRAL  (Q9Z6E4    ), CLPB_STRCO  (Q8CJV9    ), 
CLPB_STRMU  (Q8DTC7    ), CLPB_THET2  (Q72IK9    ), CLPB_THET8  (Q9RA63    ), 
CLPB_TREDE  (Q73K92    ), CLPB_TREPA  (O83110    ), CLPB_TROW8  (Q83N78    ), 
CLPB_TROWT  (Q83FI1    ), CLPB_VIBCH  (Q9KU18    ), CLPB_VIBPA  (Q87S63    ), 
CLPB_VIBVU  (Q8DEV2    ), CLPB_VIBVY  (Q7MNK1    ), CLPB_WOLPM  (Q73IE4    ), 
CLPB_WOLSU  (Q7M9X4    ), CLPB_XANAC  (Q8PHQ4    ), CLPB_XANCP  (Q8P6A0    ), 
CLPB_XYLFA  (Q9PGC1    ), CLPB_XYLFT  (Q87AX8    ), CLPB_YEREN  (Q9F746    ), 
CLPB_YERPE  (Q74X11    ), CLPC1_ARATH (Q9FI56    ), CLPC1_ORYSJ (Q7F9I1    ), 
CLPC2_ARATH (Q9SXJ7    ), CLPC2_ORYSJ (Q2QVG9    ), CLPC3_ORYSJ (Q53LY0    ), 
CLPC4_ORYSJ (Q53N47    ), CLPC_BACSU  (P37571    ), CLPC_CYACA  (Q9TM05    ), 
CLPC_GUITH  (O78410    ), CLPC_ODOSI  (P49574    ), CLPC_PEA    (P35100    ), 
CLPC_PORPU  (P51332    ), CLPC_PYRYE  (Q1XDF4    ), CLPC_STAA3  (Q2FJB5    ), 
CLPC_STAA8  (Q2G0P5    ), CLPC_STAAB  (Q2YSD6    ), CLPC_STAAC  (P0C281    ), 
CLPC_STAAM  (Q99W78    ), CLPC_STAAN  (Q7A797    ), CLPC_STAAR  (Q6GJE4    ), 
CLPC_STAAS  (Q6GBW3    ), CLPC_STAAW  (Q8NXY8    ), CLPC_STAEQ  (Q5HRM8    ), 
CLPC_STAES  (Q8CQ88    ), CLPC_STAHJ  (Q4L3I4    ), CLPC_STAS1  (Q49V34    ), 
CLPC_STRP6  (Q5XCL7    ), CLPD1_ORYSJ (Q6H795    ), CLPD2_ORYSJ (Q7XL03    ), 
CLPD_ARATH  (P42762    ), CLPE_BACSU  (O31673    ), CLPE_LACLA  (Q9CI09    ), 
CLPE_LACLM  (Q9S5Z2    ), CLPE_STRPN  (P35594    ), CLPL_LACLL  (Q06716    ), 
CLP_TRYBB   (P31543    ), HLYB_BRAHO  (Q54316    ), HS104_SCHPO (O94641    ), 
HS104_YEAST (P31539    ), HSP78_CANAL (Q96UX5    ), HSP78_SCHPO (O74402    ), 
HSP78_YEAST (P33416    ), HSP98_NEUCR (P31540    )
» more

UniProtKB/Swiss-Prot
False negative sequences
13 sequences

ADPR_RHOER  (Q01357    ), CLPB2_ARATH (F4JVJ1    ), CLPB2_CHLTE (Q8KA87    ), 
CLPL_STAA3  (Q2FDV8    ), CLPL_STAA8  (Q2FV74    ), CLPL_STAAB  (Q2YWB1    ), 
CLPL_STAAC  (Q5HD02    ), CLPL_STAAM  (Q99R88    ), CLPL_STAAN  (Q7A3F4    ), 
CLPL_STAAR  (Q6GDQ0    ), CLPL_STAAS  (Q6G6C6    ), CLPL_STAAW  (Q8NUR7    ), 
CLPV1_PSEAE (Q9I742    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences
4 sequences

CLPA_PINPS  (P81671    ), CLPA_POPEU  (P84565    ), CLPB_ACICA  (P82956    ), 
CLP_TRYCR   (O15885    )
» more

UniProtKB/Swiss-Prot
False positive sequences
1 sequence

CLPB3_ORYSJ (Q0E3C8    )

		
PDB
[Detailed view]
16 PDB

1KSF; 1R6B; 3J3R; 3J3S; 3J3T; 3J3U; 4CIU; 4D2Q; 4D2U; 4D2X; 4FCV; 4FCW; 4FD2; 4LJ5; 4LJ6; 4LJ7
» more

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission