Entry: PS00892

General information about the entry

Entry name [info] HIT_1
Accession [info] PS00892
Entry type [info] PATTERN
Date [info] OCT-1993 (CREATED); APR-2006 (DATA UPDATE); JUN-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00694

Name and characterization of the entry

Description [info] HIT domain signature.
Pattern [info]
[NQAR]-x(4)-[GSAVY]-x-[QFLPA]-x-[LIVMY]-x-[HWYRQ]-[LIVMFYST]-H-[LIVMFT]-
H-[LIVMF]-[LIVMFPT]-[PSGAWN].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_08 which contains 320'201 sequence entries.


Total number of hits 83 in 83 different sequences
Number of true positive hits 83 in 83 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 11
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 88.30 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
83 sequences

APH1_SCHPO  (P49776), APTX_BOVIN  (Q7YRZ2), APTX_CANFA  (P61797), 
APTX_CHICK  (P61798), APTX_CIOIN  (P61802), APTX_DANRE  (P61799), 
APTX_DROME  (Q8MSG8), APTX_HUMAN  (Q7Z2E3), APTX_MACFA  (Q9BGQ0), 
APTX_MOUSE  (Q7TQC5), APTX_PIG    (Q7YRZ1), APTX_RAT    (Q8K4H4), 
APTX_TAKRU  (P61800), APTX_XENLA  (Q7T287), APTX_XENTR  (P61801), 
BH140_ARATH (Q9M041), DCPS_BOVIN  (Q8MJJ7), DCPS_HUMAN  (Q96C86), 
DCPS_MOUSE  (Q9DAR7), DCPS_PIG    (Q8MIZ3), DCPS_RAT    (Q8K4F7), 
DCPS_YEAST  (Q06151), DCS2_YEAST  (Q12123), FHIT_BOVIN  (Q1KZG4), 
FHIT_DICDI  (Q86KK2), FHIT_HUMAN  (P49789), FHIT_MOUSE  (O89106), 
FHIT_RAT    (Q9JIX3), HINT1_BOVIN (P62958), HINT1_HUMAN (P49773), 
HINT1_MOUSE (P70349), HINT1_PONAB (Q5RF69), HINT1_RABIT (P80912), 
HINT1_RAT   (P62959), HINT2_BOVIN (Q8SQ21), HINT2_HUMAN (Q9BX68), 
HINT2_MOUSE (Q9D0S9), HINT_CAEEL  (P53795), HINT_ECO57  (P0ACE8), 
HINT_ECOLI  (P0ACE7), HINT_SHIFL  (P0ACE9), HITA_NEIGO  (O07817), 
HIT_BACSU   (O07513), HIT_ENTHI   (C4LYI2), HNT1_SCHPO  (O94586), 
HNT1_YEAST  (Q04344), HNT2_YEAS1  (B3LFZ1), HNT2_YEAS2  (C7GQV5), 
HNT2_YEAS6  (B5VGI4), HNT2_YEAS7  (A6ZYQ3), HNT2_YEAS8  (C8Z5L6), 
HNT2_YEAST  (P49775), NFT1_CAEEL  (O76463), NFT1_DROME  (O76464), 
PKIA_DICDI  (Q23921), Y1390_SYNE7 (P32084), Y664_CHLMU  (Q9PK09), 
Y866_METJA  (Q58276), Y961_HAEIN  (P44956), YHI1_MYCBO  (P0A5B6), 
YHI1_MYCLE  (P49774), YHI1_MYCTO  (P9WML2), YHI1_MYCTU  (P9WML3), 
YHI2_MYCTO  (P9WML0), YHI2_MYCTU  (P9WML1), YHIT_AQUAE  (O66536), 
YHIT_AZOBR  (P26724), YHIT_BORBU  (P94252), YHIT_BUCAI  (P57438), 
YHIT_BUCAP  (Q8K9I9), YHIT_BUCBP  (Q89AG5), YHIT_CHLPN  (Q9Z863), 
YHIT_CHLTR  (O84390), YHIT_HELPJ  (P64383), YHIT_HELPY  (P64382), 
YHIT_MYCGE  (P47378), YHIT_MYCHR  (P32083), YHIT_MYCPN  (P75504), 
YHIT_RICPR  (Q9ZDL1), YHIT_SULSO  (P95937), YHIT_SYNY3  (P73481), 
ZB14_BRAJU  (P42855), ZB14_MAIZE  (P42856)
» More

UniProtKB/Swiss-Prot
False negative sequences
11 sequences

AP4A_MYCTO  (P9WMK8), AP4A_MYCTU  (P9WMK9), APTX_YEAST  (Q08702), 
HINT3_BOVIN (Q2YDJ4), HINT3_DANRE (Q5PNN8), HINT3_HUMAN (Q9NQE9), 
HINT3_MOUSE (Q9CPS6), HINT3_PONAB (Q5R9L4), HINT3_RAT   (Q8K3P7), 
HINT3_XENTR (Q28BZ2), Y2839_DICDI (Q558W0)
» More

PDB
[Detailed view]
49 PDB

1AV5; 1EMS; 1FHI; 1FIT; 1KPA; 1KPB; 1KPC; 1KPE; 1KPF; 1RZY; 1VLR; 1XML; 1XMM; 1Y23; 2FIT; 3BL7; 3BL9; 3BLA; 3FIT; 3N1S; 3O1C; 3O1X; 3O1Z; 3OJ7; 3OMF; 3OXK; 3QGZ; 3RHN; 3TW2; 4EQE; 4EQG; 4EQH; 4FIT; 4INC; 4INI; 4NDF; 4NDG; 4NDH; 4NDI; 4NJX; 4NJY; 4NJZ; 4NK0; 4QDE; 4RHN; 5FIT; 5RHN; 6FIT; 6RHN
» More

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission