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Entry: PS00892

General information about the entry

Entry name [info] HIT_1
Accession [info] PS00892
Entry type [info] PATTERN
Date [info] 01-OCT-1993 CREATED; 01-APR-2006 DATA UPDATE; 22-NOV-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00694

Name and characterization of the entry

Description [info] HIT domain signature.
Pattern [info]
[NQAR]-x(4)-[GSAVY]-x-[QFLPA]-x-[LIVMY]-x-[HWYRQ]-[LIVMFYST]-H-[LIVMFT]-
H-[LIVMF]-[LIVMFPT]-[PSGAWN].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_11 which contains 556'196 sequence entries.


Total number of hits 86 in 86 different sequences
Number of true positive hits 86 in 86 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 12
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 87.76 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
86 sequences

APH1_SCHPO  (P49776    ), APTX_BOVIN  (Q7YRZ2    ), APTX_CANLF  (P61797    ), 
APTX_CHICK  (P61798    ), APTX_CIOIN  (P61802    ), APTX_DANRE  (P61799    ), 
APTX_DROME  (Q8MSG8    ), APTX_HUMAN  (Q7Z2E3    ), APTX_MACFA  (Q9BGQ0    ), 
APTX_MOUSE  (Q7TQC5    ), APTX_PIG    (Q7YRZ1    ), APTX_RAT    (Q8K4H4    ), 
APTX_TAKRU  (P61800    ), APTX_XENLA  (Q7T287    ), APTX_XENTR  (P61801    ), 
BH140_ARATH (Q9M041    ), DCPS_BOVIN  (Q8MJJ7    ), DCPS_HUMAN  (Q96C86    ), 
DCPS_MOUSE  (Q9DAR7    ), DCPS_PIG    (Q8MIZ3    ), DCPS_RAT    (Q8K4F7    ), 
DCPS_YEAST  (Q06151    ), DCS2_YEAST  (Q12123    ), FHIT_ARATH  (F4KEV7    ), 
FHIT_BOVIN  (Q1KZG4    ), FHIT_DICDI  (Q86KK2    ), FHIT_HUMAN  (P49789    ), 
FHIT_MOUSE  (O89106    ), FHIT_RAT    (Q9JIX3    ), HINT1_ARATH (Q8GUN2    ), 
HINT1_BOVIN (P62958    ), HINT1_HUMAN (P49773    ), HINT1_MOUSE (P70349    ), 
HINT1_PONAB (Q5RF69    ), HINT1_RABIT (P80912    ), HINT1_RAT   (P62959    ), 
HINT2_BOVIN (Q8SQ21    ), HINT2_HUMAN (Q9BX68    ), HINT2_MOUSE (Q9D0S9    ), 
HINT3_ARATH (F4K1R2    ), HINT_CAEEL  (P53795    ), HINT_ECO57  (P0ACE8    ), 
HINT_ECOLI  (P0ACE7    ), HINT_HAEIN  (P44956    ), HINT_SHIFL  (P0ACE9    ), 
HITA_NEIGO  (O07817    ), HIT_BACSU   (O07513    ), HIT_ENTHI   (C4LYI2    ), 
HNT1_SCHPO  (O94586    ), HNT1_YEAST  (Q04344    ), HNT2_YEAS1  (B3LFZ1    ), 
HNT2_YEAS2  (C7GQV5    ), HNT2_YEAS6  (B5VGI4    ), HNT2_YEAS7  (A6ZYQ3    ), 
HNT2_YEAS8  (C8Z5L6    ), HNT2_YEAST  (P49775    ), NFT1_CAEEL  (O76463    ), 
NFT1_DROME  (O76464    ), PKIA_DICDI  (Q23921    ), Y1390_SYNE7 (P32084    ), 
Y664_CHLMU  (Q9PK09    ), Y866_METJA  (Q58276    ), YHI1_MYCBO  (P0A5B6    ), 
YHI1_MYCLE  (P49774    ), YHI1_MYCTO  (P9WML2    ), YHI1_MYCTU  (P9WML3    ), 
YHI2_MYCTO  (P9WML0    ), YHI2_MYCTU  (P9WML1    ), YHIT_AQUAE  (O66536    ), 
YHIT_AZOBR  (P26724    ), YHIT_BORBU  (P94252    ), YHIT_BUCAI  (P57438    ), 
YHIT_BUCAP  (Q8K9I9    ), YHIT_BUCBP  (Q89AG5    ), YHIT_CHLPN  (Q9Z863    ), 
YHIT_CHLTR  (O84390    ), YHIT_HELPJ  (P64383    ), YHIT_HELPY  (P64382    ), 
YHIT_MYCGE  (P47378    ), YHIT_MYCHR  (P32083    ), YHIT_MYCPN  (P75504    ), 
YHIT_RICPR  (Q9ZDL1    ), YHIT_SULSO  (P95937    ), YHIT_SYNY3  (P73481    ), 
ZB14_BRAJU  (P42855    ), ZB14_MAIZE  (P42856    )
» more

UniProtKB/Swiss-Prot
False negative sequences
12 sequences

AP4A_MYCTO  (P9WMK8    ), AP4A_MYCTU  (P9WMK9    ), APTX_YEAST  (Q08702    ), 
HINT3_BOVIN (Q2YDJ4    ), HINT3_DANRE (Q5PNN8    ), HINT3_HUMAN (Q9NQE9    ), 
HINT3_MOUSE (Q9CPS6    ), HINT3_PONAB (Q5R9L4    ), HINT3_RAT   (Q8K3P7    ), 
HINT3_XENTR (Q28BZ2    ), HINT4_ARATH (Q84VV6    ), Y2839_DICDI (Q558W0    )
» more

PDB
[Detailed view]
56 PDB

1AV5; 1EMS; 1FHI; 1FIT; 1KPA; 1KPB; 1KPC; 1KPE; 1KPF; 1RZY; 1VLR; 1XML; 1XMM; 1Y23; 2FIT; 3BL7; 3BL9; 3BLA; 3FIT; 3N1S; 3O1C; 3O1X; 3O1Z; 3OJ7; 3OMF; 3OXK; 3QGZ; 3RHN; 3TW2; 4EQE; 4EQG; 4EQH; 4FIT; 4INC; 4INI; 4NDF; 4NDG; 4NDH; 4NDI; 4NJX; 4NJY; 4NJZ; 4NK0; 4QDE; 4QDV; 4QEB; 4RHN; 4ZGL; 4ZKL; 4ZKV; 5FIT; 5I2E; 5I2F; 5RHN; 6FIT; 6RHN
» more

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