Entry: PS00892

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General information about the entry

Entry name [info] HIT_1
Accession [info] PS00892
Entry type [info] PATTERN
Date [info] OCT-1993 (CREATED); APR-2006 (DATA UPDATE); JUN-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00694

Name and characterization of the entry

Description [info] HIT domain signature.
Pattern [info]
[NQAR]-x(4)-[GSAVY]-x-[QFLPA]-x-[LIVMY]-x-[HWYRQ]-[LIVMFYST]-H-[LIVMFT]-
H-[LIVMF]-[LIVMFPT]-[PSGAWN].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_07 which contains 546'000 sequence entries.


Total number of hits 83 in 83 different sequences
Number of true positive hits 83 in 83 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 11
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 88.30 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
83 sequences

APH1_SCHPO  (P49776), APTX_BOVIN  (Q7YRZ2), APTX_CANFA  (P61797), 
APTX_CHICK  (P61798), APTX_CIOIN  (P61802), APTX_DANRE  (P61799), 
APTX_DROME  (Q8MSG8), APTX_HUMAN  (Q7Z2E3), APTX_MACFA  (Q9BGQ0), 
APTX_MOUSE  (Q7TQC5), APTX_PIG    (Q7YRZ1), APTX_RAT    (Q8K4H4), 
APTX_TAKRU  (P61800), APTX_XENLA  (Q7T287), APTX_XENTR  (P61801), 
BH140_ARATH (Q9M041), DCPS_BOVIN  (Q8MJJ7), DCPS_HUMAN  (Q96C86), 
DCPS_MOUSE  (Q9DAR7), DCPS_PIG    (Q8MIZ3), DCPS_RAT    (Q8K4F7), 
DCPS_YEAST  (Q06151), DCS2_YEAST  (Q12123), FHIT_BOVIN  (Q1KZG4), 
FHIT_DICDI  (Q86KK2), FHIT_HUMAN  (P49789), FHIT_MOUSE  (O89106), 
FHIT_RAT    (Q9JIX3), HINT1_BOVIN (P62958), HINT1_HUMAN (P49773), 
HINT1_MOUSE (P70349), HINT1_PONAB (Q5RF69), HINT1_RABIT (P80912), 
HINT1_RAT   (P62959), HINT2_BOVIN (Q8SQ21), HINT2_HUMAN (Q9BX68), 
HINT2_MOUSE (Q9D0S9), HINT_CAEEL  (P53795), HINT_ECO57  (P0ACE8), 
HINT_ECOLI  (P0ACE7), HINT_SHIFL  (P0ACE9), HITA_NEIGO  (O07817), 
HIT_BACSU   (O07513), HIT_ENTHI   (C4LYI2), HNT1_SCHPO  (O94586), 
HNT1_YEAST  (Q04344), HNT2_YEAS1  (B3LFZ1), HNT2_YEAS2  (C7GQV5), 
HNT2_YEAS6  (B5VGI4), HNT2_YEAS7  (A6ZYQ3), HNT2_YEAS8  (C8Z5L6), 
HNT2_YEAST  (P49775), NFT1_CAEEL  (O76463), NFT1_DROME  (O76464), 
PKIA_DICDI  (Q23921), Y1390_SYNE7 (P32084), Y664_CHLMU  (Q9PK09), 
Y866_METJA  (Q58276), Y961_HAEIN  (P44956), YHI1_MYCBO  (P0A5B6), 
YHI1_MYCLE  (P49774), YHI1_MYCTO  (P9WML2), YHI1_MYCTU  (P9WML3), 
YHI2_MYCTO  (P9WML0), YHI2_MYCTU  (P9WML1), YHIT_AQUAE  (O66536), 
YHIT_AZOBR  (P26724), YHIT_BORBU  (P94252), YHIT_BUCAI  (P57438), 
YHIT_BUCAP  (Q8K9I9), YHIT_BUCBP  (Q89AG5), YHIT_CHLPN  (Q9Z863), 
YHIT_CHLTR  (O84390), YHIT_HELPJ  (P64383), YHIT_HELPY  (P64382), 
YHIT_MYCGE  (P47378), YHIT_MYCHR  (P32083), YHIT_MYCPN  (P75504), 
YHIT_RICPR  (Q9ZDL1), YHIT_SULSO  (P95937), YHIT_SYNY3  (P73481), 
ZB14_BRAJU  (P42855), ZB14_MAIZE  (P42856)
» More

UniProtKB/Swiss-Prot
False negative sequences
11 sequences

AP4A_MYCTO  (P9WMK8), AP4A_MYCTU  (P9WMK9), APTX_YEAST  (Q08702), 
HINT3_BOVIN (Q2YDJ4), HINT3_DANRE (Q5PNN8), HINT3_HUMAN (Q9NQE9), 
HINT3_MOUSE (Q9CPS6), HINT3_PONAB (Q5R9L4), HINT3_RAT   (Q8K3P7), 
HINT3_XENTR (Q28BZ2), Y2839_DICDI (Q558W0)
» More

PDB
[Detailed view]
48 PDB

1AV5; 1EMS; 1FHI; 1FIT; 1KPA; 1KPB; 1KPC; 1KPE; 1KPF; 1RZY; 1VLR; 1XML; 1XMM; 1Y23; 2FIT; 3BL7; 3BL9; 3BLA; 3FIT; 3N1S; 3O1C; 3O1X; 3O1Z; 3OJ7; 3OMF; 3OXK; 3QGZ; 3RHN; 3TW2; 4EQE; 4EQG; 4EQH; 4FIT; 4INC; 4INI; 4NDF; 4NDG; 4NDH; 4NDI; 4NJX; 4NJY; 4NJZ; 4NK0; 4RHN; 5FIT; 5RHN; 6FIT; 6RHN
» More

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