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| Entry: PS00894 |
| General information about the entry | |
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| Entry name | HTH_DEOR_1 |
| Accession number | PS00894 |
| Entry type | PATTERN |
| Date | OCT-1993 (CREATED); DEC-2004 (DATA UPDATE); MAR-2013 (INFO UPDATE). |
| PROSITE Documentation | PDOC00696 |
| Name and characterization of the entry | |
| Description | DeoR-type HTH domain signature. |
| Pattern | R-{G}-x(2)-[LIVM]-x(3)-[LIVM]-x(16,17)-[STA]-x(2)-T-[LIVMA]-[RH]-[KRNAQ]- D-[LIVMF]. |
| Numerical results | |
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| Comments | |
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| Cross-references | |
| UniProtKB/Swiss-Prot | True positive hits:ACCR_AGRT5 (P32104), AGAR_ECO57 (P0ACK4), AGAR_ECOL6 (P0ACK3), AGAR_ECOLI (P0ACK2), DEOR_ECO57 (P0ACK7), DEOR_ECOL6 (P0ACK6), DEOR_ECOLI (P0ACK5), FRUR_BACSU (O31713), FUCR_ECOLI (P0ACK8), FUCR_HAEIN (P44780), FUCR_SHIFL (P0ACK9), GATR_ECOLI (P36930), GLCR_BACSU (P94591), GLPR_ECOLI (P0ACL0), GLPR_HAEIN (P44784), GLPR_PSEAE (Q51391), GLPR_SHIFL (P0ACL1), IOLR_BACSU (P46337), LACR_LACLL (P18816), LACR_STAA8 (P0A0Q0), LACR_STAAC (Q5HE08), LACR_STAAM (P67743), LACR_STAAN (P67744), LACR_STAAR (Q6GEN3), LACR_STAAS (Q6G7B8), LACR_STAAW (P0A0P9), LACR_STAEQ (Q5HM34), LACR_STAES (Q8CRJ1), LACR_STRMU (P26422), SGCR_ECOLI (P39361), SP3D_BACSU (P15281), SRLR_ECOLI (P15082), ULAR_ECO24 (A7ZV62), ULAR_ECO27 (B7UQK0), ULAR_ECO45 (B7MLJ6), ULAR_ECO55 (B7LC45), ULAR_ECO57 (P0A9W2), ULAR_ECO5E (B5Z2J7), ULAR_ECO7I (B7NTP7), ULAR_ECO81 (B7MSL0), ULAR_ECO8A (B7M8V1), ULAR_ECOBW (C4ZR68), ULAR_ECODH (B1XDU2), ULAR_ECOHS (A8A7T7), ULAR_ECOK1 (A1AJ96), ULAR_ECOL5 (Q0T9K2), ULAR_ECOL6 (P0A9W1), ULAR_ECOLC (B1IT15), ULAR_ECOLI (P0A9W0), ULAR_ECOLU (B7NGC5), ULAR_ECOSE (B6I296), ULAR_ECOSM (B1LQL1), ULAR_ECOUT (Q1R369), ULAR_SALA4 (B5F3A7), ULAR_SALAR (A9MFM3), ULAR_SALCH (Q57GK1), ULAR_SALDC (B5FS93), ULAR_SALEP (B5R0Q8), ULAR_SALHS (B4TFC5), ULAR_SALNS (B4T3E2), ULAR_SALPA (Q5PJ50), ULAR_SALPB (A9N507), ULAR_SALPC (C0Q6E8), ULAR_SALPK (B5BKJ9), ULAR_SALSV (B4TSH1), ULAR_SALTI (Q8XG96), ULAR_SALTY (Q7CP93), ULAR_SHIB3 (B2TY64), ULAR_SHIBS (Q31TC2), ULAR_SHIDS (Q328K6), ULAR_SHIF8 (Q0SX94), ULAR_SHIFL (Q83P30), ULAR_SHISS (Q3YUF6), Y1009_HAEIN (P44978), Y1102_STAES (Q8CSL5), YCIT_ECOLI (P76034), YDJF_ECOLI (P77721), YFJR_ECOLI (P52133), YGBI_ECOLI (P52598), YIHW_ECOLI (P32144), YULB_BACSU (O05261)False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile): CCPN_BACSU (O34994), YCNK_BACSU (P94433), YOBV_BACSU (O34920), YTZE_BACSU (O32067)False positive hits (sequences which do not belong to the set under consideration): MVP1_YARLI (Q6CHY6)Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view]
[Clustal format, color]
[Clustal format, plain text]
[Fasta format]
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| PDB [Detailed view] |
2L0K; |
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