Entry: PS00895

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General information about the entry

Entry name [info] 3_HYDROXYISOBUT_DH
Accession [info] PS00895
Entry type [info] PATTERN
Date [info] OCT-1993 (CREATED); DEC-2001 (DATA UPDATE); JUN-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00697

Name and characterization of the entry

Description [info] 3-hydroxyisobutyrate dehydrogenase signature.
Pattern [info]
[LIVMFY](2)-G-L-G-x-[MQ]-G-x(2)-[MA]-[SAV]-x-[SNHR].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_07 which contains 546'000 sequence entries.


Total number of hits 31 in 31 different sequences
Number of true positive hits 29 in 29 different sequences
Number of 'unknown' hits
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 18
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 93.55 %
Recall (true positives / (true positives + false negatives)) 61.70 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
29 sequences

3HIDH_ARATH (Q9SUC0), 3HIDH_CAEEL (Q9XTI0), 3HIDH_DROME (Q9V8M5), 
3HIDH_HUMAN (P31937), 3HIDH_MOUSE (Q99L13), 3HIDH_PONAB (Q5R5E7), 
3HIDH_RABIT (P32185), 3HIDH_RAT   (P29266), GARR_ECOL6  (P0ABQ3), 
GARR_ECOLI  (P0ABQ2), GLXR_ECOLI  (P77161), GLYR1_AEDAE (Q175F8), 
GLYR1_ARATH (Q9LSV0), HMGD_EUBBA  (Q0QLF5), MMSB_MYCBO  (P63936), 
MMSB_MYCTO  (P9WNY4), MMSB_MYCTU  (P9WNY5), MMSB_PSEAE  (P28811), 
SERDH_PSEAE (Q9I5I6), SQUU_ECOLI  (P0A9V8), SQUU_SALTY  (Q9L7S0), 
SQUU_SHIFL  (P0A9V9), Y1010_HAEIN (P44979), Y1503_SHEFN (O33730), 
Y229_SYNY3  (Q55702), Y770_MYCTO  (P9WNY2), Y770_MYCTU  (P9WNY3), 
YGBJ_ECOLI  (Q46888), YKWC_BACSU  (O34948)
» More

UniProtKB/Swiss-Prot
False negative sequences
18 sequences

3HID1_ARATH (Q9SZE1), 3HID2_ARATH (Q9C991), 3HID3_ARATH (Q949M8), 
3HIDH_BOVIN (Q2HJD7), 3HIDH_DICDI (Q54CX6), GLYR1_ANOGA (Q7Q161), 
GLYR1_BOVIN (A4FUF0), GLYR1_CHICK (Q5ZLS7), GLYR1_DANRE (Q5RKN4), 
GLYR1_DROME (Q8T079), GLYR1_DROPS (Q29NG1), GLYR1_HUMAN (Q49A26), 
GLYR1_MOUSE (Q922P9), GLYR1_PONAB (Q5R7T2), GLYR1_RAT   (Q5RKH0), 
GLYR1_XENTR (Q562D5), GLYR2_ARATH (F4I907), YFJR_BACSU  (O34969)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

3HIDH_MESAU (P86199)

		
UniProtKB/Swiss-Prot
False positive sequences
2 sequences

MSOX_STRAW  (Q827H4), MSOX_STRSB  (P40854)

		
PDB
[Detailed view]
4 PDB

2GF2; 2I9P; 3CKY; 3DOJ

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