Entry: PS00895

General information about the entry

Entry name [info] 3_HYDROXYISOBUT_DH
Accession [info] PS00895
Entry type [info] PATTERN
Date [info] OCT-1993 (CREATED); DEC-2001 (DATA UPDATE); JUN-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00697

Name and characterization of the entry

Description [info] 3-hydroxyisobutyrate dehydrogenase signature.
Pattern [info]
[LIVMFY](2)-G-L-G-x-[MQ]-G-x(2)-[MA]-[SAV]-x-[SNHR].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_07 which contains 551'705 sequence entries.


Total number of hits 31 in 31 different sequences
Number of true positive hits 29 in 29 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 18
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 93.55 %
Recall (true positives / (true positives + false negatives)) 61.70 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
29 sequences

3HIDH_ARATH (Q9SUC0    ), 3HIDH_CAEEL (Q9XTI0    ), 3HIDH_DROME (Q9V8M5    ), 
3HIDH_HUMAN (P31937    ), 3HIDH_MOUSE (Q99L13    ), 3HIDH_PONAB (Q5R5E7    ), 
3HIDH_RABIT (P32185    ), 3HIDH_RAT   (P29266    ), GARR_ECOL6  (P0ABQ3    ), 
GARR_ECOLI  (P0ABQ2    ), GLXR_ECOLI  (P77161    ), GLYR1_AEDAE (Q175F8    ), 
GLYR1_ARATH (Q9LSV0    ), HMGD_EUBBA  (Q0QLF5    ), MMSB_MYCBO  (P63936    ), 
MMSB_MYCTO  (P9WNY4    ), MMSB_MYCTU  (P9WNY5    ), MMSB_PSEAE  (P28811    ), 
SERDH_PSEAE (Q9I5I6    ), SQUU_ECOLI  (P0A9V8    ), SQUU_SALTY  (Q9L7S0    ), 
SQUU_SHIFL  (P0A9V9    ), Y1010_HAEIN (P44979    ), Y1503_SHEFN (O33730    ), 
Y229_SYNY3  (Q55702    ), Y770_MYCTO  (P9WNY2    ), Y770_MYCTU  (P9WNY3    ), 
YGBJ_ECOLI  (Q46888    ), YKWC_BACSU  (O34948    )
» more

UniProtKB/Swiss-Prot
False negative sequences
18 sequences

3HID1_ARATH (Q9SZE1    ), 3HID2_ARATH (Q9C991    ), 3HID3_ARATH (Q949M8    ), 
3HIDH_BOVIN (Q2HJD7    ), 3HIDH_DICDI (Q54CX6    ), GLYR1_ANOGA (Q7Q161    ), 
GLYR1_BOVIN (A4FUF0    ), GLYR1_CHICK (Q5ZLS7    ), GLYR1_DANRE (Q5RKN4    ), 
GLYR1_DROME (Q8T079    ), GLYR1_DROPS (Q29NG1    ), GLYR1_HUMAN (Q49A26    ), 
GLYR1_MOUSE (Q922P9    ), GLYR1_PONAB (Q5R7T2    ), GLYR1_RAT   (Q5RKH0    ), 
GLYR1_XENTR (Q562D5    ), GLYR2_ARATH (F4I907    ), YFJR_BACSU  (O34969    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

3HIDH_MESAU (P86199    )

		
UniProtKB/Swiss-Prot
False positive sequences
2 sequences

MSOX_STRAW  (Q827H4    ), MSOX_STRSB  (P40854    )

		
PDB
[Detailed view]
4 PDB

2GF2; 2I9P; 3CKY; 3DOJ

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