Entry: PS00938

Forthcoming changes to the profile format
General information about the entry

Entry name [info] IF3
Accession [info] PS00938
Entry type [info] PATTERN
Date [info] JUN-1994 (CREATED); DEC-2001 (DATA UPDATE); JUN-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00723

Name and characterization of the entry

Description [info] Initiation factor 3 signature.
Pattern [info]
[KR]-[LIVM](2)-[DN]-[FY]-[GSTN]-[KR]-[LIVMFYS]-x-[FY]-[DEQTAHI]-x(2)-
[KRQ].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_07 which contains 546'000 sequence entries.


Total number of hits 258 in 258 different sequences
Number of true positive hits 251 in 251 different sequences
Number of 'unknown' hits
Number of false positive hits 7 in 7 different sequences
Number of false negative sequences 60
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 97.29 %
Recall (true positives / (true positives + false negatives)) 80.71 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
251 sequences

IF3B_NOSS1  (Q8YUH8), IF3C_CYAME  (Q85G77), IF3C_EUGGR  (P36177), 
IF3C_GALSU  (Q9MS97), IF3C_GRATL  (Q6B8N5), IF3C_PORPU  (P51231), 
IF3C_PYRYE  (Q1XDQ6), IF3_ACAM1   (B0CD77), IF3_ALISL   (B6EN33), 
IF3_ANAVT   (Q3MBH6), IF3_AQUAE   (O67653), IF3_AROAE   (Q5P7X6), 
IF3_AZOC5   (A8HWL0), IF3_BACAN   (Q81L15), IF3_BACC1   (Q72ZG2), 
IF3_BACCR   (Q812P6), IF3_BACCZ   (Q633M1), IF3_BACFN   (Q5LEQ5), 
IF3_BACFR   (Q64VP1), IF3_BACHD   (Q9K867), IF3_BACSK   (Q5WEI6), 
IF3_BACSU   (P55872), IF3_BACTN   (Q8AAP1), IF3_BACV8   (A6L7J6), 
IF3_BLOFL   (Q7VR70), IF3_BORAP   (Q0SNX3), IF3_BORBR   (Q7WKF6), 
IF3_BORBU   (O51208), IF3_BORBZ   (B7J1C3), IF3_BORDL   (B5RL16), 
IF3_BORGA   (Q662H4), IF3_BORHD   (B2RZQ1), IF3_BORPA   (Q7W911), 
IF3_BORPE   (Q7VY63), IF3_BORRA   (B5RR09), IF3_BORT9   (A1QYY5), 
IF3_BUCA5   (B8D8S7), IF3_BUCAI   (P57226), IF3_BUCAP   (P46243), 
IF3_BUCAT   (B8D731), IF3_BUCBP   (P59446), IF3_CAMC1   (A7ZAZ8), 
IF3_CAMC5   (A7GVZ3), IF3_CAMFF   (A0RRI8), IF3_CAMJ8   (A8FK08), 
IF3_CAMJD   (A7H1S1), IF3_CAMJE   (Q9PIS2), IF3_CAMJJ   (A1VXT6), 
IF3_CAMJR   (Q5HWW2), IF3_CAMLR   (B9KEB2), IF3_CAUCN   (B8H312), 
IF3_CAUCR   (Q9A9D9), IF3_CAUSK   (B0SY03), IF3_CHLCV   (Q822B2), 
IF3_CHLMU   (Q9PL86), IF3_CHLTR   (O84840), IF3_CHRVO   (Q7NYC5), 
IF3_CLOAB   (Q97GK5), IF3_CLOPE   (Q8XJ67), IF3_CLOTE   (Q891T1), 
IF3_COREF   (Q8FTQ2), IF3_CORGB   (A4QDY1), IF3_CORGL   (Q8NQP8), 
IF3_COXBU   (Q83C11), IF3_CYAP8   (B7JYL4), IF3_DEIDV   (C1D0V9), 
IF3_DEIGD   (Q1IY80), IF3_DEIRA   (Q9RSN7), IF3_DESVH   (Q728R6), 
IF3_DESVM   (B8DPN1), IF3_DESVV   (A1VBB5), IF3_ECO27   (B7USA1), 
IF3_ECO57   (P0A709), IF3_ECOBW   (C4ZYI0), IF3_ECOL6   (P0A708), 
IF3_ECOLC   (B1IPL0), IF3_ECOLI   (P0A707), IF3_ELUMP   (B2KB83), 
IF3_ENTFA   (Q837C9), IF3_FUSNN   (Q8R5Y3), IF3_GEOMG   (Q39VS8), 
IF3_GEOSE   (P03000), IF3_GEOSL   (Q74D03), IF3_GLOVI   (Q7NJS6), 
IF3_HAEDU   (Q7VKS0), IF3_HAEIN   (P43814), IF3_HAMD5   (C4K777), 
IF3_HELHP   (Q7VJ08), IF3_HELPJ   (Q9ZMV2), IF3_HELPY   (P55973), 
IF3_HYPNA   (Q0C535), IF3_IDILO   (Q5QYN5), IF3_KLEPN   (P33318), 
IF3_LACJO   (Q74IC4), IF3_LACLA   (Q9CEJ7), IF3_LACPL   (Q88WU8), 
IF3_LEGPA   (Q5X1H4), IF3_LEGPL   (Q5WT83), IF3_LEPBA   (B0SCH4), 
IF3_LEPBJ   (Q04U56), IF3_LEPBL   (Q04ZG9), IF3_LEPBP   (B0SKZ7), 
IF3_LEPIC   (Q72PK8), IF3_LEPIN   (Q8F6Q9), IF3_LISIN   (P0A3L2), 
IF3_LISMF   (Q71YN3), IF3_LISMO   (P0A3L1), IF3_MACCJ   (B9E784), 
IF3_MESFL   (Q6F1S8), IF3_MICAN   (B0JKQ1), IF3_MYCBO   (P65136), 
IF3_MYCCT   (Q2SSS1), IF3_MYCFE   (Q05426), IF3_MYCGE   (P47438), 
IF3_MYCLE   (Q9CC22), IF3_MYCMS   (Q6MU22), IF3_MYCPN   (P78024), 
IF3_MYCPU   (Q98QV2), IF3_MYCTO   (P9WKJ8), IF3_MYCTU   (P9WKJ9), 
IF3_MYXXA   (P48516), IF3_MYXXD   (Q1DES4), IF3_NAUPA   (B9L5U8), 
IF3_NEIG1   (Q5F9U3), IF3_NEIMA   (P65137), IF3_NEIMB   (P65138), 
IF3_NEIMF   (A1KSY3), IF3_NITSB   (A6Q167), IF3_NOSP7   (B2IY66), 
IF3_NOSS1   (Q8YNE3), IF3_OCEIH   (Q8EPF5), IF3_PARL1   (A7HPJ7), 
IF3_PASMU   (Q9CN42), IF3_PECAS   (Q6D4G9), IF3_PECCP   (C6DFY7), 
IF3_PHEZH   (B4R9C1), IF3_PROHU   (P33319), IF3_PROM0   (A3PFC5), 
IF3_PROM1   (A2C586), IF3_PROM2   (A8G7E2), IF3_PROM3   (A2C600), 
IF3_PROM4   (A9BD81), IF3_PROM5   (A2BZ21), IF3_PROM9   (Q318A5), 
IF3_PROMA   (Q7V9N2), IF3_PROMH   (B4ETK7), IF3_PROMM   (Q7TV76), 
IF3_PROMP   (Q7TU24), IF3_PROMS   (A2BTL8), IF3_PROMT   (Q46IH3), 
IF3_PSEF5   (Q4KEW3), IF3_PSEFS   (C3JZN6), IF3_PSEHT   (Q3IL80), 
IF3_PSEPH   (Q9X6E7), IF3_PSESM   (P0A132), IF3_PSESY   (P0A133), 
IF3_RALSO   (Q8XZ28), IF3_RHOBA   (Q7UJ17), IF3_RHOS4   (O33567), 
IF3_RICCN   (Q92HK6), IF3_RICFE   (Q4ULG2), IF3_RICPR   (Q9ZD19), 
IF3_RICTY   (Q68WK5), IF3_RUEPO   (Q5LQ58), IF3_SALPA   (Q5PH88), 
IF3_SALTI   (Q8Z6I3), IF3_SALTY   (P33321), IF3_SERMA   (P33320), 
IF3_SHEB2   (B8EES7), IF3_SHEB8   (A6WNH1), IF3_SHEON   (Q8EER8), 
IF3_SHEWM   (B1KG60), IF3_SHIFL   (Q83L38), IF3_SORC5   (A9F8E5), 
IF3_STAA3   (Q2FG56), IF3_STAA8   (Q2FXP9), IF3_STAAB   (Q2YTA9), 
IF3_STAAC   (Q5HF92), IF3_STAAE   (A6QHL4), IF3_STAAM   (P65139), 
IF3_STAAN   (P65140), IF3_STAAR   (Q6GG25), IF3_STAAS   (Q6G8P5), 
IF3_STAAW   (P65141), IF3_STACT   (B9DNC6), IF3_STAEQ   (Q5HNM3), 
IF3_STAES   (Q8CS75), IF3_STAS1   (Q49YB2), IF3_STRA1   (Q3K0C8), 
IF3_STRA3   (P65142), IF3_STRA5   (P65143), IF3_STRE4   (C0M8S9), 
IF3_STREM   (B4U2J9), IF3_STRMU   (Q8DV22), IF3_STRP1   (P65146), 
IF3_STRP2   (Q04KW9), IF3_STRP3   (P0DB86), IF3_STRP4   (B5E478), 
IF3_STRP6   (Q5XCU2), IF3_STRP7   (C1C6T6), IF3_STRP8   (P65148), 
IF3_STRPB   (Q1JCH2), IF3_STRPC   (Q1JMF0), IF3_STRPD   (Q1JHJ7), 
IF3_STRPF   (Q1J7B8), IF3_STRPG   (A2RF84), IF3_STRPI   (B1IBB9), 
IF3_STRPJ   (B8ZP56), IF3_STRPM   (Q48U94), IF3_STRPN   (P65144), 
IF3_STRPQ   (P0DB87), IF3_STRPZ   (B5XKT8), IF3_STRR6   (P65145), 
IF3_STRS7   (C0MGM0), IF3_STRT1   (Q5LZL7), IF3_STRT2   (Q5M470), 
IF3_STRTD   (Q03KI9), IF3_STRU0   (B9DU40), IF3_STRZJ   (C1CDV4), 
IF3_STRZP   (C1CK40), IF3_STRZT   (C1CRU1), IF3_SULDN   (Q30UI3), 
IF3_SYNP2   (B1XM04), IF3_SYNPW   (A5GI06), IF3_SYNPX   (Q7UA08), 
IF3_SYNR3   (A5GQ34), IF3_SYNS3   (Q0IDZ5), IF3_SYNS9   (Q3B0M2), 
IF3_SYNSC   (Q3ANG8), IF3_SYNY3   (P72874), IF3_THEEB   (Q8DIG8), 
IF3_THEMA   (Q9X1S6), IF3_THETN   (Q8R9C2), IF3_TREPA   (O83822), 
IF3_TREPS   (B2S488), IF3_TROW8   (Q83HH0), IF3_TROWT   (Q83GT2), 
IF3_UNCTG   (B1GZU2), IF3_UREPA   (Q9PQR4), IF3_VIBCH   (O68844), 
IF3_WIGBR   (Q8D3B9), IF3_WOLSU   (Q7M9L9), IF3_XANAC   (Q8PJE2), 
IF3_XANCP   (Q8P7Z3), IF3_XANP2   (A7IGN8), IF3_XYLFA   (Q9PFE1), 
IF3_XYLFT   (Q87AB3), IF3_YERE8   (A1JMK2), IF3_YERP3   (A7FHG2), 
IF3_YERPE   (Q8ZDW6), IF3_YERPS   (Q669Z1)
» More

UniProtKB/Swiss-Prot
False negative sequences
60 sequences

IF3C_CYACA  (Q9TLX8), IF3M_BOVIN  (Q32KZ1), IF3M_HUMAN  (Q9H2K0), 
IF3M_MOUSE  (Q9CZD5), IF3_ACIAD   (Q6F861), IF3_ACIBS   (B0VV99), 
IF3_ACIBY   (B0V5P1), IF3_ANAD2   (B8J830), IF3_ANADE   (Q2IJB8), 
IF3_ANADF   (A7HBI7), IF3_ANASK   (B4UAN5), IF3_AZOPC   (B6YQ94), 
IF3_AZOVI   (Q8RQ01), IF3_BARBK   (A1UUD5), IF3_BARHE   (Q6G570), 
IF3_BARQU   (Q6G1I3), IF3_BART1   (A9ILC8), IF3_BRADU   (Q89WH7), 
IF3_BRUAB   (P0A3L0), IF3_BRUME   (P0A3K8), IF3_BRUSU   (P0A3K9), 
IF3_CAMHC   (A7I108), IF3_CHLCH   (Q3APW0), IF3_CHLL2   (B3EEC0), 
IF3_CHLP8   (B3QRM3), IF3_CHLPB   (B3EKG8), IF3_CHLPD   (A1BJB3), 
IF3_CHLPN   (Q9Z6R9), IF3_CHLTE   (Q8KAM9), IF3_EHRCR   (Q2GI91), 
IF3_EHRRG   (Q5FGP0), IF3_EHRRW   (Q5H9Z3), IF3_METC4   (B7KV98), 
IF3_METI4   (B3DYI1), IF3_METPB   (B1ZGB8), IF3_METRJ   (B1M6P9), 
IF3_METS4   (B0UP34), IF3_OCHA4   (A6WX21), IF3_PARD8   (A6L9S3), 
IF3_PELLD   (Q3B6L9), IF3_PORG3   (B2RJD7), IF3_PORGI   (Q7MVQ6), 
IF3_PROA2   (B4S3D1), IF3_PROVI   (A4SCK3), IF3_PSEAE   (Q9I0A0), 
IF3_PSEE4   (Q1IC14), IF3_PSEP1   (A5W5E0), IF3_PSEPG   (B0KKR7), 
IF3_PSEPK   (Q88K26), IF3_PSEPW   (B1J6U5), IF3_RHILO   (Q98CP5), 
IF3_RHILW   (B5ZXR7), IF3_RHIME   (Q92ST3), IF3_SOLUE   (Q02D92), 
IF3_STRAW   (Q828D2), IF3_STRCO   (O88060), IF3_THET2   (Q9ACJ8), 
IF3_THET8   (Q5SKU2), IF3_THETH   (Q70YI5), IF3_ZYMMO   (Q5NL80)
» More

UniProtKB/Swiss-Prot
False positive sequences
7 sequences

T2R20_GORGO (Q646A0), T2R20_HUMAN (P59543), T2R20_PANPA (Q646E3), 
T2R20_PANTR (Q646C2), T2R20_PAPHA (Q646G1), T2R20_PONPY (Q645V6), 
TRM13_DICDI (Q54BD5)
» More

PDB
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1 PDB

1TIF

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