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Entry: PS00938

General information about the entry

Entry name [info] IF3
Accession [info] PS00938
Entry type [info] PATTERN
Date [info] 01-JUN-1994 CREATED; 01-DEC-2001 DATA UPDATE; 22-NOV-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00723

Name and characterization of the entry

Description [info] Initiation factor 3 signature.
Pattern [info]
[KR]-[LIVM](2)-[DN]-[FY]-[GSTN]-[KR]-[LIVMFYS]-x-[FY]-[DEQTAHI]-x(2)-
[KRQ].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_11 which contains 556'196 sequence entries.


Total number of hits 260 in 260 different sequences
Number of true positive hits 253 in 253 different sequences
Number of 'unknown' hits 0
Number of false positive hits 7 in 7 different sequences
Number of false negative sequences 61
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 97.31 %
Recall (true positives / (true positives + false negatives)) 80.57 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
253 sequences

IF32_ARATH  (O82234    ), IF34_ARATH  (Q94B52    ), IF3B_NOSS1  (Q8YUH8    ), 
IF3C_CYAM1  (Q85G77    ), IF3C_EUGGR  (P36177    ), IF3C_GALSU  (Q9MS97    ), 
IF3C_GRATL  (Q6B8N5    ), IF3C_PORPU  (P51231    ), IF3C_PYRYE  (Q1XDQ6    ), 
IF3_ACAM1   (B0CD77    ), IF3_ALISL   (B6EN33    ), IF3_ANAVT   (Q3MBH6    ), 
IF3_AQUAE   (O67653    ), IF3_AROAE   (Q5P7X6    ), IF3_AZOC5   (A8HWL0    ), 
IF3_BACAN   (Q81L15    ), IF3_BACC1   (Q72ZG2    ), IF3_BACCR   (Q812P6    ), 
IF3_BACCZ   (Q633M1    ), IF3_BACFN   (Q5LEQ5    ), IF3_BACFR   (Q64VP1    ), 
IF3_BACHD   (Q9K867    ), IF3_BACSK   (Q5WEI6    ), IF3_BACSU   (P55872    ), 
IF3_BACTN   (Q8AAP1    ), IF3_BACV8   (A6L7J6    ), IF3_BLOFL   (Q7VR70    ), 
IF3_BORAP   (Q0SNX3    ), IF3_BORBP   (Q662H4    ), IF3_BORBR   (Q7WKF6    ), 
IF3_BORBU   (O51208    ), IF3_BORBZ   (B7J1C3    ), IF3_BORDL   (B5RL16    ), 
IF3_BORHD   (B2RZQ1    ), IF3_BORPA   (Q7W911    ), IF3_BORPE   (Q7VY63    ), 
IF3_BORRA   (B5RR09    ), IF3_BORT9   (A1QYY5    ), IF3_BUCA5   (B8D8S7    ), 
IF3_BUCAI   (P57226    ), IF3_BUCAP   (P46243    ), IF3_BUCAT   (B8D731    ), 
IF3_BUCBP   (P59446    ), IF3_CALS4   (Q8R9C2    ), IF3_CAMC1   (A7ZAZ8    ), 
IF3_CAMC5   (A7GVZ3    ), IF3_CAMFF   (A0RRI8    ), IF3_CAMJ8   (A8FK08    ), 
IF3_CAMJD   (A7H1S1    ), IF3_CAMJE   (Q9PIS2    ), IF3_CAMJJ   (A1VXT6    ), 
IF3_CAMJR   (Q5HWW2    ), IF3_CAMLR   (B9KEB2    ), IF3_CAUCN   (B8H312    ), 
IF3_CAUCR   (Q9A9D9    ), IF3_CAUSK   (B0SY03    ), IF3_CHLCV   (Q822B2    ), 
IF3_CHLMU   (Q9PL86    ), IF3_CHLTR   (O84840    ), IF3_CHRVO   (Q7NYC5    ), 
IF3_CLOAB   (Q97GK5    ), IF3_CLOPE   (Q8XJ67    ), IF3_CLOTE   (Q891T1    ), 
IF3_COREF   (Q8FTQ2    ), IF3_CORGB   (A4QDY1    ), IF3_CORGL   (Q8NQP8    ), 
IF3_COXBU   (Q83C11    ), IF3_CYAP8   (B7JYL4    ), IF3_DEIDV   (C1D0V9    ), 
IF3_DEIGD   (Q1IY80    ), IF3_DEIRA   (Q9RSN7    ), IF3_DESVH   (Q728R6    ), 
IF3_DESVM   (B8DPN1    ), IF3_DESVV   (A1VBB5    ), IF3_ECO27   (B7USA1    ), 
IF3_ECO57   (P0A709    ), IF3_ECOBW   (C4ZYI0    ), IF3_ECOL6   (P0A708    ), 
IF3_ECOLC   (B1IPL0    ), IF3_ECOLI   (P0A707    ), IF3_ELUMP   (B2KB83    ), 
IF3_ENTFA   (Q837C9    ), IF3_FUSNN   (Q8R5Y3    ), IF3_GEOMG   (Q39VS8    ), 
IF3_GEOSE   (P03000    ), IF3_GEOSL   (Q74D03    ), IF3_GLOVI   (Q7NJS6    ), 
IF3_HAEDU   (Q7VKS0    ), IF3_HAEIN   (P43814    ), IF3_HAMD5   (C4K777    ), 
IF3_HELHP   (Q7VJ08    ), IF3_HELPJ   (Q9ZMV2    ), IF3_HELPY   (P55973    ), 
IF3_HYPNA   (Q0C535    ), IF3_IDILO   (Q5QYN5    ), IF3_KLEPN   (P33318    ), 
IF3_LACJO   (Q74IC4    ), IF3_LACLA   (Q9CEJ7    ), IF3_LACPL   (Q88WU8    ), 
IF3_LEGPA   (Q5X1H4    ), IF3_LEGPL   (Q5WT83    ), IF3_LEPBA   (B0SCH4    ), 
IF3_LEPBJ   (Q04U56    ), IF3_LEPBL   (Q04ZG9    ), IF3_LEPBP   (B0SKZ7    ), 
IF3_LEPIC   (Q72PK8    ), IF3_LEPIN   (Q8F6Q9    ), IF3_LISIN   (P0A3L2    ), 
IF3_LISMF   (Q71YN3    ), IF3_LISMO   (P0A3L1    ), IF3_MACCJ   (B9E784    ), 
IF3_MESFL   (Q6F1S8    ), IF3_MICAN   (B0JKQ1    ), IF3_MYCBO   (P65136    ), 
IF3_MYCCT   (Q2SSS1    ), IF3_MYCFE   (Q05426    ), IF3_MYCGE   (P47438    ), 
IF3_MYCLE   (Q9CC22    ), IF3_MYCMS   (Q6MU22    ), IF3_MYCPN   (P78024    ), 
IF3_MYCPU   (Q98QV2    ), IF3_MYCTO   (P9WKJ8    ), IF3_MYCTU   (P9WKJ9    ), 
IF3_MYXXA   (P48516    ), IF3_MYXXD   (Q1DES4    ), IF3_NAUPA   (B9L5U8    ), 
IF3_NEIG1   (Q5F9U3    ), IF3_NEIMA   (P65137    ), IF3_NEIMB   (P65138    ), 
IF3_NEIMF   (A1KSY3    ), IF3_NITSB   (A6Q167    ), IF3_NOSP7   (B2IY66    ), 
IF3_NOSS1   (Q8YNE3    ), IF3_OCEIH   (Q8EPF5    ), IF3_PARL1   (A7HPJ7    ), 
IF3_PASMU   (Q9CN42    ), IF3_PECAS   (Q6D4G9    ), IF3_PECCP   (C6DFY7    ), 
IF3_PHEZH   (B4R9C1    ), IF3_PROHU   (P33319    ), IF3_PROM0   (A3PFC5    ), 
IF3_PROM1   (A2C586    ), IF3_PROM2   (A8G7E2    ), IF3_PROM3   (A2C600    ), 
IF3_PROM4   (A9BD81    ), IF3_PROM5   (A2BZ21    ), IF3_PROM9   (Q318A5    ), 
IF3_PROMA   (Q7V9N2    ), IF3_PROMH   (B4ETK7    ), IF3_PROMM   (Q7TV76    ), 
IF3_PROMP   (Q7TU24    ), IF3_PROMS   (A2BTL8    ), IF3_PROMT   (Q46IH3    ), 
IF3_PSEF5   (Q4KEW3    ), IF3_PSEFS   (C3JZN6    ), IF3_PSEHT   (Q3IL80    ), 
IF3_PSEPH   (Q9X6E7    ), IF3_PSESM   (P0A132    ), IF3_PSESY   (P0A133    ), 
IF3_RALSO   (Q8XZ28    ), IF3_RHOBA   (Q7UJ17    ), IF3_RHOS4   (O33567    ), 
IF3_RICCN   (Q92HK6    ), IF3_RICFE   (Q4ULG2    ), IF3_RICPR   (Q9ZD19    ), 
IF3_RICTY   (Q68WK5    ), IF3_RUEPO   (Q5LQ58    ), IF3_SALPA   (Q5PH88    ), 
IF3_SALTI   (Q8Z6I3    ), IF3_SALTY   (P33321    ), IF3_SERMA   (P33320    ), 
IF3_SHEB2   (B8EES7    ), IF3_SHEB8   (A6WNH1    ), IF3_SHEON   (Q8EER8    ), 
IF3_SHEWM   (B1KG60    ), IF3_SHIFL   (Q83L38    ), IF3_SORC5   (A9F8E5    ), 
IF3_STAA3   (Q2FG56    ), IF3_STAA8   (Q2FXP9    ), IF3_STAAB   (Q2YTA9    ), 
IF3_STAAC   (Q5HF92    ), IF3_STAAE   (A6QHL4    ), IF3_STAAM   (P65139    ), 
IF3_STAAN   (P65140    ), IF3_STAAR   (Q6GG25    ), IF3_STAAS   (Q6G8P5    ), 
IF3_STAAW   (P65141    ), IF3_STACT   (B9DNC6    ), IF3_STAEQ   (Q5HNM3    ), 
IF3_STAES   (Q8CS75    ), IF3_STAS1   (Q49YB2    ), IF3_STRA1   (Q3K0C8    ), 
IF3_STRA3   (P65142    ), IF3_STRA5   (P65143    ), IF3_STRE4   (C0M8S9    ), 
IF3_STREM   (B4U2J9    ), IF3_STRMU   (Q8DV22    ), IF3_STRP1   (P65146    ), 
IF3_STRP2   (Q04KW9    ), IF3_STRP3   (P0DB86    ), IF3_STRP4   (B5E478    ), 
IF3_STRP6   (Q5XCU2    ), IF3_STRP7   (C1C6T6    ), IF3_STRP8   (P65148    ), 
IF3_STRPB   (Q1JCH2    ), IF3_STRPC   (Q1JMF0    ), IF3_STRPD   (Q1JHJ7    ), 
IF3_STRPF   (Q1J7B8    ), IF3_STRPG   (A2RF84    ), IF3_STRPI   (B1IBB9    ), 
IF3_STRPJ   (B8ZP56    ), IF3_STRPM   (Q48U94    ), IF3_STRPN   (P65144    ), 
IF3_STRPQ   (P0DB87    ), IF3_STRPZ   (B5XKT8    ), IF3_STRR6   (P65145    ), 
IF3_STRS7   (C0MGM0    ), IF3_STRT1   (Q5LZL7    ), IF3_STRT2   (Q5M470    ), 
IF3_STRTD   (Q03KI9    ), IF3_STRU0   (B9DU40    ), IF3_STRZJ   (C1CDV4    ), 
IF3_STRZP   (C1CK40    ), IF3_STRZT   (C1CRU1    ), IF3_SULDN   (Q30UI3    ), 
IF3_SYNP2   (B1XM04    ), IF3_SYNPW   (A5GI06    ), IF3_SYNPX   (Q7UA08    ), 
IF3_SYNR3   (A5GQ34    ), IF3_SYNS3   (Q0IDZ5    ), IF3_SYNS9   (Q3B0M2    ), 
IF3_SYNSC   (Q3ANG8    ), IF3_SYNY3   (P72874    ), IF3_THEEB   (Q8DIG8    ), 
IF3_THEMA   (Q9X1S6    ), IF3_TREPA   (O83822    ), IF3_TREPS   (B2S488    ), 
IF3_TROW8   (Q83HH0    ), IF3_TROWT   (Q83GT2    ), IF3_UNCTG   (B1GZU2    ), 
IF3_UREPA   (Q9PQR4    ), IF3_VIBCH   (O68844    ), IF3_WIGBR   (Q8D3B9    ), 
IF3_WOLSU   (Q7M9L9    ), IF3_XANAC   (Q8PJE2    ), IF3_XANCP   (Q8P7Z3    ), 
IF3_XANP2   (A7IGN8    ), IF3_XYLFA   (Q9PFE1    ), IF3_XYLFT   (Q87AB3    ), 
IF3_YERE8   (A1JMK2    ), IF3_YERP3   (A7FHG2    ), IF3_YERPE   (Q8ZDW6    ), 
IF3_YERPS   (Q669Z1    )
» more

UniProtKB/Swiss-Prot
False negative sequences
61 sequences

IF31_ARATH  (Q6NLP2    ), IF3C_CYACA  (Q9TLX8    ), IF3M_BOVIN  (Q32KZ1    ), 
IF3M_HUMAN  (Q9H2K0    ), IF3M_MOUSE  (Q9CZD5    ), IF3_ACIAD   (Q6F861    ), 
IF3_ACIBS   (B0VV99    ), IF3_ACIBY   (B0V5P1    ), IF3_ANAD2   (B8J830    ), 
IF3_ANADE   (Q2IJB8    ), IF3_ANADF   (A7HBI7    ), IF3_ANASK   (B4UAN5    ), 
IF3_AZOPC   (B6YQ94    ), IF3_AZOVI   (Q8RQ01    ), IF3_BARBK   (A1UUD5    ), 
IF3_BARHE   (Q6G570    ), IF3_BARQU   (Q6G1I3    ), IF3_BART1   (A9ILC8    ), 
IF3_BRADU   (Q89WH7    ), IF3_BRUAB   (P0A3L0    ), IF3_BRUME   (P0A3K8    ), 
IF3_BRUSU   (P0A3K9    ), IF3_CAMHC   (A7I108    ), IF3_CHLCH   (Q3APW0    ), 
IF3_CHLL2   (B3EEC0    ), IF3_CHLL7   (Q3B6L9    ), IF3_CHLP8   (B3QRM3    ), 
IF3_CHLPB   (B3EKG8    ), IF3_CHLPD   (A1BJB3    ), IF3_CHLPM   (A4SCK3    ), 
IF3_CHLPN   (Q9Z6R9    ), IF3_CHLTE   (Q8KAM9    ), IF3_EHRCR   (Q2GI91    ), 
IF3_EHRRG   (Q5FGP0    ), IF3_EHRRW   (Q5H9Z3    ), IF3_METC4   (B7KV98    ), 
IF3_METI4   (B3DYI1    ), IF3_METPB   (B1ZGB8    ), IF3_METRJ   (B1M6P9    ), 
IF3_METS4   (B0UP34    ), IF3_OCHA4   (A6WX21    ), IF3_PARD8   (A6L9S3    ), 
IF3_PORG3   (B2RJD7    ), IF3_PORGI   (Q7MVQ6    ), IF3_PROA2   (B4S3D1    ), 
IF3_PSEAE   (Q9I0A0    ), IF3_PSEE4   (Q1IC14    ), IF3_PSEP1   (A5W5E0    ), 
IF3_PSEPG   (B0KKR7    ), IF3_PSEPK   (Q88K26    ), IF3_PSEPW   (B1J6U5    ), 
IF3_RHILO   (Q98CP5    ), IF3_RHILW   (B5ZXR7    ), IF3_RHIME   (Q92ST3    ), 
IF3_SOLUE   (Q02D92    ), IF3_STRAW   (Q828D2    ), IF3_STRCO   (O88060    ), 
IF3_THET2   (Q9ACJ8    ), IF3_THET8   (Q5SKU2    ), IF3_THETH   (Q70YI5    ), 
IF3_ZYMMO   (Q5NL80    )
» more

UniProtKB/Swiss-Prot
False positive sequences
7 sequences

T2R20_GORGO (Q646A0    ), T2R20_HUMAN (P59543    ), T2R20_PANPA (Q646E3    ), 
T2R20_PANTR (Q646C2    ), T2R20_PAPHA (Q646G1    ), T2R20_PONPY (Q645V6    ), 
TRM13_DICDI (Q54BD5    )
» more

PDB
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1 PDB

1TIF

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