Entry: PS00946

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General information about the entry

Entry name [info] CATHELICIDINS_1
Accession [info] PS00946
Entry type [info] PATTERN
Date [info] JUN-1994 (CREATED); NOV-1997 (DATA UPDATE); JUN-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00729

Name and characterization of the entry

Description [info] Cathelicidins signature 1.
Pattern [info]
Y-x-[ED]-x-V-x-[RQ]-A-[LIVMA]-[DQG]-x-[LIVMFY]-N-[EQ].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_07 which contains 546'000 sequence entries.


Total number of hits 46 in 46 different sequences
Number of true positive hits 46 in 46 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 10
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 82.14 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
46 sequences

CAMP_ATEFR  (Q1KLY8), CAMP_ATEFU  (Q1KLY7), CAMP_CEBCA  (Q1KLY5), 
CAMP_GORGO  (Q1KLY3), CAMP_HUMAN  (P49913), CAMP_HYLML  (Q1KLX8), 
CAMP_MACFA  (Q1KLX7), CAMP_MACMU  (Q9GLV5), CAMP_MACTO  (Q1KLX6), 
CAMP_NOMCO  (Q1KLY0), CAMP_NOMGA  (Q1KLY2), CAMP_NOMLE  (Q1KLX9), 
CAMP_PANTR  (Q1KLX1), CAMP_PAPPA  (Q1KLX3), CAMP_SAGOE  (Q1KLX0), 
CAMP_TRACR  (Q1KLX5), CAMP_TRAOB  (Q1KLX4), CAP18_RABIT (P25230), 
CRAMP_MOUSE (P51437), CTHL1_BOVIN (P22226), CTHL1_SHEEP (P54230), 
CTHL2_BOVIN (P19660), CTHL2_CAPHI (P82018), CTHL2_SHEEP (P79362), 
CTHL3_BOVIN (P19661), CTHL3_SHEEP (P50415), CTHL4_BOVIN (P33046), 
CTHL5_BOVIN (P54229), CTHL6_BOVIN (P54228), CTHL7_BOVIN (P56425), 
ICTL_PIG    (P15175), P15A_RABIT  (P26202), P15B_RABIT  (P26203), 
PF11_PIG    (P51524), PF12_PIG    (P51525), PG1_PIG     (P32194), 
PG2_PIG     (P32195), PG3_PIG     (P32196), PG4_PIG     (P49933), 
PG5_PIG     (P49934), PMP23_PIG   (P49930), PMP36_PIG   (P49931), 
PMP37_PIG   (P49932), PR39_PIG    (P80054), SC51_SHEEP  (P49928), 
SC52_SHEEP  (P49929)
» More

UniProtKB/Swiss-Prot
False negative sequences
10 sequences

CAMP_BUNFA  (B6D434), CAMP_CALJA  (Q1KLY4), CAMP_CHLAE  (Q1KLY6), 
CAMP_NAJAT  (B6S2X0), CAMP_OPHHA  (B6S2X2), CAMP_PONPY  (Q1KLX2), 
CTHB1_CHICK (Q5F378), CTHL1_CHICK (Q6QLQ5), CTHL2_CHICK (Q2IAL7), 
CTHL3_CHICK (Q2IAL6)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

CTHL3_CAPHI (P85170)

		
PDB
[Detailed view]
6 PDB

1KWI; 1LXE; 1N5H; 1N5P; 1PFP; 4EYC

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