Entry: PS00946

General information about the entry

Entry name [info] CATHELICIDINS_1
Accession [info] PS00946
Entry type [info] PATTERN
Date [info] 01-JUN-1994 CREATED; 01-NOV-1997 DATA UPDATE; 05-JUL-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00729

Name and characterization of the entry

Description [info] Cathelicidins signature 1.
Pattern [info] 
Y-x-[ED]-x-V-x-[RQ]-A-[LIVMA]-[DQG]-x-[LIVMFY]-N-[EQ].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_07 which contains 555'100 sequence entries.


Total number of hits 46 in 46 different sequences
Number of true positive hits 46 in 46 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 10
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 82.14 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 46 sequences 

CAMP_ATEFR  (Q1KLY8    ), CAMP_ATEFU  (Q1KLY7    ), CAMP_CEBCA  (Q1KLY5    ), 

CAMP_GORGO  (Q1KLY3    ), CAMP_HUMAN  (P49913    ), CAMP_HYLML  (Q1KLX8    ), 
CAMP_MACFA  (Q1KLX7    ), CAMP_MACMU  (Q9GLV5    ), CAMP_MACTO  (Q1KLX6    ), 
CAMP_MOUSE  (P51437    ), CAMP_NOMCO  (Q1KLY0    ), CAMP_NOMGA  (Q1KLY2    ), 
CAMP_NOMLE  (Q1KLX9    ), CAMP_PANTR  (Q1KLX1    ), CAMP_PAPPA  (Q1KLX3    ), 
CAMP_SAGOE  (Q1KLX0    ), CAMP_TRACR  (Q1KLX5    ), CAMP_TRAOB  (Q1KLX4    ), 
CAP18_RABIT (P25230    ), CTHL1_BOVIN (P22226    ), CTHL1_SHEEP (P54230    ), 
CTHL2_BOVIN (P19660    ), CTHL2_CAPHI (P82018    ), CTHL2_SHEEP (P79362    ), 
CTHL3_BOVIN (P19661    ), CTHL3_SHEEP (P50415    ), CTHL4_BOVIN (P33046    ), 
CTHL5_BOVIN (P54229    ), CTHL6_BOVIN (P54228    ), CTHL7_BOVIN (P56425    ), 
ICTL_PIG    (P15175    ), P15A_RABIT  (P26202    ), P15B_RABIT  (P26203    ), 
PF11_PIG    (P51524    ), PF12_PIG    (P51525    ), PG1_PIG     (P32194    ), 
PG2_PIG     (P32195    ), PG3_PIG     (P32196    ), PG4_PIG     (P49933    ), 
PG5_PIG     (P49934    ), PMP23_PIG   (P49930    ), PMP36_PIG   (P49931    ), 
PMP37_PIG   (P49932    ), PR39_PIG    (P80054    ), SC51_SHEEP  (P49928    ), 
SC52_SHEEP  (P49929    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 10 sequences 

CAMP_BUNFA  (B6D434    ), CAMP_CALJA  (Q1KLY4    ), CAMP_CHLAE  (Q1KLY6    ), 

CAMP_NAJAT  (B6S2X0    ), CAMP_OPHHA  (B6S2X2    ), CAMP_PONPY  (Q1KLX2    ), 
CTHB1_CHICK (Q5F378    ), CTHL1_CHICK (Q6QLQ5    ), CTHL2_CHICK (Q2IAL7    ), 
CTHL3_CHICK (Q2IAL6    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 1 sequence 

CTHL3_CAPHI (P85170    )


				
	

	

		PDB
[Detailed view]		
		
			6 PDB
			


			1KWI; 1LXE; 1N5H; 1N5P; 1PFP; 4EYC
				
	





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