Entry: PS00946

General information about the entry

Entry name [info] CATHELICIDINS_1
Accession [info] PS00946
Entry type [info] PATTERN
Date [info] JUN-1994 (CREATED); NOV-1997 (DATA UPDATE); MAY-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00729

Name and characterization of the entry

Description [info] Cathelicidins signature 1.
Pattern [info]
Y-x-[ED]-x-V-x-[RQ]-A-[LIVMA]-[DQG]-x-[LIVMFY]-N-[EQ].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_07 which contains 548'872 sequence entries.


Total number of hits 46 in 46 different sequences
Number of true positive hits 46 in 46 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 10
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 82.14 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
46 sequences

CAMP_ATEFR  (Q1KLY8), CAMP_ATEFU  (Q1KLY7), CAMP_CEBCA  (Q1KLY5), 
CAMP_GORGO  (Q1KLY3), CAMP_HUMAN  (P49913), CAMP_HYLML  (Q1KLX8), 
CAMP_MACFA  (Q1KLX7), CAMP_MACMU  (Q9GLV5), CAMP_MACTO  (Q1KLX6), 
CAMP_NOMCO  (Q1KLY0), CAMP_NOMGA  (Q1KLY2), CAMP_NOMLE  (Q1KLX9), 
CAMP_PANTR  (Q1KLX1), CAMP_PAPPA  (Q1KLX3), CAMP_SAGOE  (Q1KLX0), 
CAMP_TRACR  (Q1KLX5), CAMP_TRAOB  (Q1KLX4), CAP18_RABIT (P25230), 
CRAMP_MOUSE (P51437), CTHL1_BOVIN (P22226), CTHL1_SHEEP (P54230), 
CTHL2_BOVIN (P19660), CTHL2_CAPHI (P82018), CTHL2_SHEEP (P79362), 
CTHL3_BOVIN (P19661), CTHL3_SHEEP (P50415), CTHL4_BOVIN (P33046), 
CTHL5_BOVIN (P54229), CTHL6_BOVIN (P54228), CTHL7_BOVIN (P56425), 
ICTL_PIG    (P15175), P15A_RABIT  (P26202), P15B_RABIT  (P26203), 
PF11_PIG    (P51524), PF12_PIG    (P51525), PG1_PIG     (P32194), 
PG2_PIG     (P32195), PG3_PIG     (P32196), PG4_PIG     (P49933), 
PG5_PIG     (P49934), PMP23_PIG   (P49930), PMP36_PIG   (P49931), 
PMP37_PIG   (P49932), PR39_PIG    (P80054), SC51_SHEEP  (P49928), 
SC52_SHEEP  (P49929)
» More

UniProtKB/Swiss-Prot
False negative sequences
10 sequences

CAMP_BUNFA  (B6D434), CAMP_CALJA  (Q1KLY4), CAMP_CHLAE  (Q1KLY6), 
CAMP_NAJAT  (B6S2X0), CAMP_OPHHA  (B6S2X2), CAMP_PONPY  (Q1KLX2), 
CTHB1_CHICK (Q5F378), CTHL1_CHICK (Q6QLQ5), CTHL2_CHICK (Q2IAL7), 
CTHL3_CHICK (Q2IAL6)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

CTHL3_CAPHI (P85170)

		
PDB
[Detailed view]
6 PDB

1KWI; 1LXE; 1N5H; 1N5P; 1PFP; 4EYC

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