Entry: PS00953

General information about the entry
Entry name GLYCOSYL_HYDROL_F25
Accession number PS00953
Entry type PATTERN
Date JUN-1994 (CREATED); DEC-2004 (DATA UPDATE); APR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00737
Associated ProRule PRU10065
Name and characterization of the entry
DescriptionGlycosyl hydrolases family 25 active sites signature.
Pattern D-[LIVM]-x(3)-[NQ]-[PGE]-x(9,15)-[GR]-x(4)-[LIVMFY](2)-K-x-[ST]-E-[GS]- x(2)-[FYL]-x-[DN].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_06, total number of sequence entries in that release: 540261.
  • Total number of hits in UniProtKB/Swiss-Prot: 11 hits in 11 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 11 hits in 11 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 0
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 100.00 %
Comments
  • Taxonomic range: Bacteriophages, Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 1,active_site
  • `Interesting' site in the pattern: 12,active_site
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
LYSM1_STRGL (P25310), LYS_BPCP1   (P15057), LYS_BPCP7   (P19385), 
LYS_BPCP9   (P19386), LYS_BPMV1   (P33486), LYS_CHASP   (P00721), 
LYS_CLOAB   (P34020), LYS_CLOPE   (P26836), YEGX_ECO57  (Q8X7H0), 
YEGX_ECOL6  (Q8FFY2), YEGX_ECOLI  (P76421)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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PDB
[Detailed view]		 1H09; 1JFX; 1OBA; 2IXU; 2IXV; 2J8F; 2J8G;

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