Entry: PS00968

General information about the entry

Entry name [info] ANTENNA_COMP_ALPHA
Accession [info] PS00968
Entry type [info] PATTERN
Date [info] JUN-1994 (CREATED); JUL-1998 (DATA UPDATE); JUN-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00748

Name and characterization of the entry

Description [info] Antenna complexes alpha subunits signature.
Pattern [info]
[LIVFAG]-x-[GASV]-[LIVFA]-x-[IV]-H-x(3)-[LIVM]-[GSTAE]-[STANH]-x(1,3)-
[STN]-W-[LIVMFYW].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_08 which contains 551'987 sequence entries.


Total number of hits 32 in 32 different sequences
Number of true positive hits 32 in 32 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 2
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 94.12 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
32 sequences

LHA1_HALHL  (P80100    ), LHA1_HALHR  (P80102    ), LHA1_RHOAC  (P35089    ), 
LHA1_RHOCA  (P02948    ), LHA1_RHOPA  (P35101    ), LHA1_RHOS4  (Q3J1A4    ), 
LHA1_RHOSH  (P0C0X9    ), LHA1_RHOTE  (P80588    ), LHA1_RUBGE  (P0DJO0    ), 
LHA1_RUBGI  (I0HUL6    ), LHA2_HALHL  (P80101    ), LHA2_HALHR  (P80103    ), 
LHA2_RHOAC  (P35090    ), LHA2_RHOCA  (P07367    ), LHA2_RHOPA  (P35102    ), 
LHA2_RHOS4  (Q3J144    ), LHA2_RHOSH  (P0C0Y0    ), LHA2_RHOTE  (P80589    ), 
LHA3_HALHL  (P80107    ), LHA3_RHOAC  (P35091    ), LHA3_RHOPL  (P35103    ), 
LHA4_RHOAC  (P26789    ), LHA4_RHOPA  (P35104    ), LHA5_RHOPA  (P35105    ), 
LHA6_RHOAC  (P35092    ), LHA7_RHOAC  (P35093    ), LHA_AFIMA   (P80259    ), 
LHA_BLAVI   (P04123    ), LHA_CHLAA   (P07503    ), LHA_PHAMO   (P97253    ), 
LHA_RHORU   (P02947    ), LHA_ROSDO   (P26273    )
» more

UniProtKB/Swiss-Prot
False negative sequences
2 sequences

LHA2_RHOSU  (P95655    ), LHA_RHOTE   (P80586    )

		
PDB
[Detailed view]
6 PDB

1IJD; 1KZU; 1LGH; 1NKZ; 1XRD; 2FKW

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