Entry: PS00968

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General information about the entry

Entry name [info] ANTENNA_COMP_ALPHA
Accession [info] PS00968
Entry type [info] PATTERN
Date [info] JUN-1994 (CREATED); JUL-1998 (DATA UPDATE); OCT-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00748

Name and characterization of the entry

Description [info] Antenna complexes alpha subunits signature.
Pattern [info]
[LIVFAG]-x-[GASV]-[LIVFA]-x-[IV]-H-x(3)-[LIVM]-[GSTAE]-[STANH]-x(1,3)-
[STN]-W-[LIVMFYW].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_11 which contains 547'085 sequence entries.


Total number of hits 32 in 32 different sequences
Number of true positive hits 32 in 32 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 2
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 94.12 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
32 sequences

LHA1_HALHL  (P80100), LHA1_HALHR  (P80102), LHA1_RHOAC  (P35089), 
LHA1_RHOCA  (P02948), LHA1_RHOPA  (P35101), LHA1_RHOS4  (Q3J1A4), 
LHA1_RHOSH  (P0C0X9), LHA1_RHOTE  (P80588), LHA1_RUBGE  (P0DJO0), 
LHA1_RUBGI  (I0HUL6), LHA2_HALHL  (P80101), LHA2_HALHR  (P80103), 
LHA2_RHOAC  (P35090), LHA2_RHOCA  (P07367), LHA2_RHOPA  (P35102), 
LHA2_RHOS4  (Q3J144), LHA2_RHOSH  (P0C0Y0), LHA2_RHOTE  (P80589), 
LHA3_HALHL  (P80107), LHA3_RHOAC  (P35091), LHA3_RHOPL  (P35103), 
LHA4_RHOAC  (P26789), LHA4_RHOPA  (P35104), LHA5_RHOPA  (P35105), 
LHA6_RHOAC  (P35092), LHA7_RHOAC  (P35093), LHA_AFIMA   (P80259), 
LHA_BLAVI   (P04123), LHA_CHLAA   (P07503), LHA_PHAMO   (P97253), 
LHA_RHORU   (P02947), LHA_ROSDO   (P26273)
» More

UniProtKB/Swiss-Prot
False negative sequences
2 sequences

LHA2_RHOSU  (P95655), LHA_RHOTE   (P80586)

		

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