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Entry: PS00982

General information about the entry

Entry name [info] PHYTOENE_DH
Accession [info] PS00982
Entry type [info] PATTERN
Date [info] 01-JUN-1994 CREATED; 01-NOV-1997 DATA UPDATE; 27-SEP-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00755

Name and characterization of the entry

Description [info] Bacterial-type phytoene dehydrogenase signature.
Pattern [info]
[NG]-x-[FYWV]-[LIVMF]-x-G-[AGC]-[GS]-[TA]-[HQT]-P-G-[STAV]-G-[LIVM]-
x(5)-[GS].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_09 which contains 555'594 sequence entries.


Total number of hits 13 in 13 different sequences
Number of true positive hits 13 in 13 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 11
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 54.17 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
13 sequences

CRTD_RHOCB  (P17059    ), CRTD_RHOS4  (Q01671    ), CRTI_CERNC  (P48537    ), 
CRTI_ESCVU  (P22871    ), CRTI_MYXXA  (Q02861    ), CRTI_NEUCR  (P21334    ), 
CRTI_PANAN  (P21685    ), CRTI_PARSN  (P54978    ), CRTI_PHYB8  (P54982    ), 
CRTI_RHOCB  (P17054    ), CRTI_RHOS4  (P54980    ), CRTI_STRGR  (P54981    ), 
CRTJ_MYXXA  (P54979    )
» more

UniProtKB/Swiss-Prot
False negative sequences
11 sequences

CRTN_STAA3  (Q2FDU6    ), CRTN_STAA8  (Q2FV60    ), CRTN_STAAB  (Q2YWE8    ), 
CRTN_STAAC  (Q5HCY9    ), CRTN_STAAE  (O07855    ), CRTN_STAAM  (Q99R76    ), 
CRTN_STAAN  (Q7A3E2    ), CRTN_STAAR  (Q6GDN7    ), CRTN_STAAS  (Q6G6B3    ), 
CRTN_STAAW  (Q8NUQ6    ), CRTN_STAHJ  (Q4L975    )
» more


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