Entry: PS00982

General information about the entry

Entry name [info] PHYTOENE_DH
Accession [info] PS00982
Entry type [info] PATTERN
Date [info] JUN-1994 (CREATED); NOV-1997 (DATA UPDATE); JUN-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00755

Name and characterization of the entry

Description [info] Bacterial-type phytoene dehydrogenase signature.
Pattern [info]
[NG]-x-[FYWV]-[LIVMF]-x-G-[AGC]-[GS]-[TA]-[HQT]-P-G-[STAV]-G-[LIVM]-
x(5)-[GS].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_08 which contains 320'201 sequence entries.


Total number of hits 13 in 13 different sequences
Number of true positive hits 13 in 13 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 11
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 54.17 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
13 sequences

CRTD_RHOCB  (P17059), CRTD_RHOS4  (Q01671), CRTI_CERNC  (P48537), 
CRTI_ESCVU  (P22871), CRTI_MYXXA  (Q02861), CRTI_NEUCR  (P21334), 
CRTI_PANAN  (P21685), CRTI_PARSN  (P54978), CRTI_PHYB8  (P54982), 
CRTI_RHOCB  (P17054), CRTI_RHOS4  (P54980), CRTI_STRGR  (P54981), 
CRTJ_MYXXA  (P54979)
» More

UniProtKB/Swiss-Prot
False negative sequences
11 sequences

CRTN_STAA3  (Q2FDU6), CRTN_STAA8  (Q2FV60), CRTN_STAAB  (Q2YWE8), 
CRTN_STAAC  (Q5HCY9), CRTN_STAAE  (O07855), CRTN_STAAM  (Q99R76), 
CRTN_STAAN  (Q7A3E2), CRTN_STAAR  (Q6GDN7), CRTN_STAAS  (Q6G6B3), 
CRTN_STAAW  (Q8NUQ6), CRTN_STAHJ  (Q4L975)
» More


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