Entry: PS00995

General information about the entry

Entry name [info] TCP1_3
Accession [info] PS00995
Entry type [info] PATTERN
Date [info] JUN-1994 (CREATED); NOV-1995 (DATA UPDATE); MAY-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00610

Name and characterization of the entry

Description [info] Chaperonins TCP-1 signature 3.
Pattern [info]
Q-[DEK]-x-x-[LIVMGTA]-[GA]-D-G-T.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_07 which contains 548'872 sequence entries.


Total number of hits 154 in 154 different sequences
Number of true positive hits 142 in 142 different sequences
Number of 'unknown' hits 0
Number of false positive hits 12 in 12 different sequences
Number of false negative sequences 9
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 92.21 %
Recall (true positives / (true positives + false negatives)) 94.04 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
142 sequences

TCPA_ARATH  (P28769), TCPA_BOVIN  (Q32L40), TCPA_CAEEL  (P41988), 
TCPA_CRIGR  (P18279), TCPA_DICDI  (Q55BM4), TCPA_DROME  (P12613), 
TCPA_ENCCU  (Q8SSC9), TCPA_HUMAN  (P17987), TCPA_MACFA  (Q4R5G2), 
TCPA_MONDO  (Q9XT06), TCPA_MOUSE  (P11983), TCPA_PALPA  (Q9W790), 
TCPA_RAT    (P28480), TCPA_SCHMA  (Q94757), TCPA_SCHPO  (O94501), 
TCPA_TETPY  (O15891), TCPA_YEAST  (P12612), TCPB_ARATH  (Q940P8), 
TCPB_BOVIN  (Q3ZBH0), TCPB_CAEEL  (P47207), TCPB_DICDI  (Q54ES9), 
TCPB_HUMAN  (P78371), TCPB_MACFA  (Q4R6F8), TCPB_MESAU  (P86245), 
TCPB_MOUSE  (P80314), TCPB_RAT    (Q5XIM9), TCPB_SCHPO  (Q10147), 
TCPB_YEAST  (P39076), TCPD_ARATH  (Q9LV21), TCPD_ASHGO  (Q75A36), 
TCPD_BOVIN  (Q2T9X2), TCPD_CAEEL  (P47208), TCPD_CANGA  (Q6FQT2), 
TCPD_DEBHA  (Q6BXF6), TCPD_DICDI  (Q54CL2), TCPD_HUMAN  (P50991), 
TCPD_KLULA  (Q6CL82), TCPD_MOUSE  (P80315), TCPD_OCHTR  (Q9NB32), 
TCPD_PONAB  (Q5R637), TCPD_RAT    (Q7TPB1), TCPD_SCHPO  (P50999), 
TCPD_TAKRU  (P53451), TCPD_YARLI  (Q6C100), TCPD_YEAST  (P39078), 
TCPE1_AVESA (P40412), TCPE2_AVESA (P54411), TCPE_ARATH  (O04450), 
TCPE_CAEEL  (P47209), TCPE_DICDI  (Q54TD3), TCPE_ENCCU  (Q8SRP9), 
TCPE_HUMAN  (P48643), TCPE_MACFA  (Q4R6V2), TCPE_MOUSE  (P80316), 
TCPE_PONAB  (Q5RF02), TCPE_RAT    (Q68FQ0), TCPE_SCHPO  (Q9UTM4), 
TCPE_YEAST  (P40413), TCPG_ARATH  (Q84WV1), TCPG_BOVIN  (Q3T0K2), 
TCPG_DICDI  (Q54TH8), TCPG_DROME  (P48605), TCPG_ENCCU  (Q8SR76), 
TCPG_HUMAN  (P49368), TCPG_MOUSE  (P80318), TCPG_OXYGR  (O00782), 
TCPG_PIG    (Q29068), TCPG_PONAB  (Q5NVF9), TCPG_RAT    (Q6P502), 
TCPG_SCHPO  (O74341), TCPG_TETPY  (P54408), TCPG_XENLA  (P50143), 
TCPG_YEAST  (P39077), TCPH_ARATH  (Q9SF16), TCPH_BOVIN  (Q2NKZ1), 
TCPH_CHICK  (Q5ZJK8), TCPH_DICDI  (Q54ER7), TCPH_ENCCU  (Q8SR53), 
TCPH_HUMAN  (Q99832), TCPH_MOUSE  (P80313), TCPH_PLAF7  (O77323), 
TCPH_PONAB  (Q5R5C8), TCPH_SCHPO  (P87153), TCPH_TETPY  (P54409), 
TCPH_TETTH  (P54410), TCPH_YEAST  (P42943), TCPQ_BOVIN  (Q3ZCI9), 
TCPQ_CHICK  (Q6EE31), TCPQ_DICDI  (Q552J0), TCPQ_HUMAN  (P50990), 
TCPQ_MACFA  (Q4R5J0), TCPQ_MOUSE  (P42932), TCPQ_PONAB  (Q5RAP1), 
TCPQ_YEAST  (P47079), TCPW_BOVIN  (Q3T084), TCPW_HUMAN  (Q92526), 
TCPW_MOUSE  (Q61390), TCPZ_BOVIN  (Q3MHL7), TCPZ_CAEEL  (P46550), 
TCPZ_CHICK  (Q5ZJ54), TCPZ_DICDI  (Q76NU3), TCPZ_HUMAN  (P40227), 
TCPZ_MOUSE  (P80317), TCPZ_PIG    (Q29236), TCPZ_PONAB  (Q5RCD2), 
TCPZ_RABIT  (O77622), TCPZ_SCHPO  (O94515), TCPZ_YEAST  (P39079), 
THS1_HALVD  (O30561), THS2_HALVD  (O30560), THS3_HALVD  (Q9HHA2), 
THSA_AERPE  (Q9YDK6), THSA_ARCFU  (O28045), THSA_HALSA  (Q9HN70), 
THSA_METTH  (O26320), THSA_SULAC  (Q9V2T5), THSA_SULSH  (P46219), 
THSA_SULSO  (Q9V2S9), THSA_SULTO  (O24734), THSA_THEAC  (P48424), 
THSA_THEK1  (P61112), THSA_THEK8  (O24731), THSA_THEKO  (P61111), 
THSB_AERPE  (Q9YA66), THSB_ARCFU  (O28821), THSB_DESMO  (Q9V2T3), 
THSB_HALSA  (Q9HNI0), THSB_METTH  (O26885), THSB_SULAC  (Q9V2T4), 
THSB_SULSH  (P28488), THSB_SULSO  (Q9V2T8), THSB_SULTO  (O24735), 
THSB_THEAC  (P48425), THSB_THEK1  (O24730), THSB_THEK8  (O24732), 
THSB_THEKO  (Q52500), THS_DESSY   (Q53546), THS_METJA   (Q58405), 
THS_METKA   (P50016), THS_METTL   (O93624), THS_PYRAB   (Q9V2Q7), 
THS_PYRHO   (O57762)
» More

UniProtKB/Swiss-Prot
False negative sequences
9 sequences

TCPG_THAWE  (Q9LKI7), TCPQL_HUMAN (A6NM43), TCPQM_HUMAN (Q96SF2), 
TCPQ_CAEBR  (A8X6I9), TCPQ_CAEEL  (Q9N358), TCPQ_CANAX  (P47828), 
TCPQ_SCHPO  (P78921), THSG_SULSH  (Q9HH21), THSG_SULSO  (Q9V2T7)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

TCPA_AMBME  (P50157), TCPA_MESAU  (P86208)

		
UniProtKB/Swiss-Prot
False positive sequences
12 sequences

BGLL_ASPFC  (B0YB65), BGLL_ASPFU  (Q4WGT3), BGLL_NEOFI  (A1DCV5), 
MPE1_YEAST  (P35728), NAL14_HUMAN (Q86W24), PRA11_HUMAN (O60813), 
RLMKL_PSEF5 (Q4KFI6), RLMKL_PSEPF (Q3KFC5), SAT_CHLCH   (Q3AQ83), 
Y392_LISMO  (Q92EP8), Y404_LISMF  (Q723S2), Y410_LISIN  (Q7AP31)
» More

PDB
[Detailed view]
13 PDB

1A6D; 1A6E; 1Q2V; 1Q3Q; 1Q3R; 1Q3S; 3IYG; 3KTT; 4A0O; 4A0V; 4A0W; 4A13; 4B2T
» More

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