Entry: PS00995

General information about the entry

Entry name [info] TCP1_3
Accession [info] PS00995
Entry type [info] PATTERN
Date [info] JUN-1994 (CREATED); NOV-1995 (DATA UPDATE); OCT-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00610

Name and characterization of the entry

Description [info] Chaperonins TCP-1 signature 3.
Pattern [info]
Q-[DEK]-x-x-[LIVMGTA]-[GA]-D-G-T.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_11 which contains 553'231 sequence entries.


Total number of hits 155 in 155 different sequences
Number of true positive hits 143 in 143 different sequences
Number of 'unknown' hits 0
Number of false positive hits 12 in 12 different sequences
Number of false negative sequences 9
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 92.26 %
Recall (true positives / (true positives + false negatives)) 94.08 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
143 sequences

TCPA_ARATH  (P28769    ), TCPA_BOVIN  (Q32L40    ), TCPA_CAEEL  (P41988    ), 
TCPA_CRIGR  (P18279    ), TCPA_DICDI  (Q55BM4    ), TCPA_DROME  (P12613    ), 
TCPA_ENCCU  (Q8SSC9    ), TCPA_HUMAN  (P17987    ), TCPA_MACFA  (Q4R5G2    ), 
TCPA_MONDO  (Q9XT06    ), TCPA_MOUSE  (P11983    ), TCPA_PALPA  (Q9W790    ), 
TCPA_RAT    (P28480    ), TCPA_SCHMA  (Q94757    ), TCPA_SCHPO  (O94501    ), 
TCPA_TETPY  (O15891    ), TCPA_YEAST  (P12612    ), TCPB_ARATH  (Q940P8    ), 
TCPB_BOVIN  (Q3ZBH0    ), TCPB_CAEEL  (P47207    ), TCPB_DICDI  (Q54ES9    ), 
TCPB_HUMAN  (P78371    ), TCPB_MACFA  (Q4R6F8    ), TCPB_MESAU  (P86245    ), 
TCPB_MOUSE  (P80314    ), TCPB_RAT    (Q5XIM9    ), TCPB_SCHPO  (Q10147    ), 
TCPB_YEAST  (P39076    ), TCPD_ARATH  (Q9LV21    ), TCPD_ASHGO  (Q75A36    ), 
TCPD_BOVIN  (Q2T9X2    ), TCPD_CAEEL  (P47208    ), TCPD_CANGA  (Q6FQT2    ), 
TCPD_DEBHA  (Q6BXF6    ), TCPD_DICDI  (Q54CL2    ), TCPD_HUMAN  (P50991    ), 
TCPD_KLULA  (Q6CL82    ), TCPD_MOUSE  (P80315    ), TCPD_OCHTR  (Q9NB32    ), 
TCPD_PONAB  (Q5R637    ), TCPD_RAT    (Q7TPB1    ), TCPD_SCHPO  (P50999    ), 
TCPD_TAKRU  (P53451    ), TCPD_YARLI  (Q6C100    ), TCPD_YEAST  (P39078    ), 
TCPE1_AVESA (P40412    ), TCPE2_AVESA (P54411    ), TCPE_ARATH  (O04450    ), 
TCPE_CAEEL  (P47209    ), TCPE_DICDI  (Q54TD3    ), TCPE_ENCCU  (Q8SRP9    ), 
TCPE_HUMAN  (P48643    ), TCPE_MACFA  (Q4R6V2    ), TCPE_MOUSE  (P80316    ), 
TCPE_PONAB  (Q5RF02    ), TCPE_RAT    (Q68FQ0    ), TCPE_SCHPO  (Q9UTM4    ), 
TCPE_YEAST  (P40413    ), TCPG_ARATH  (Q84WV1    ), TCPG_BOVIN  (Q3T0K2    ), 
TCPG_CAEEL  (Q9N4J8    ), TCPG_DICDI  (Q54TH8    ), TCPG_DROME  (P48605    ), 
TCPG_ENCCU  (Q8SR76    ), TCPG_HUMAN  (P49368    ), TCPG_MOUSE  (P80318    ), 
TCPG_OXYGR  (O00782    ), TCPG_PIG    (Q29068    ), TCPG_PONAB  (Q5NVF9    ), 
TCPG_RAT    (Q6P502    ), TCPG_SCHPO  (O74341    ), TCPG_TETPY  (P54408    ), 
TCPG_XENLA  (P50143    ), TCPG_YEAST  (P39077    ), TCPH_ARATH  (Q9SF16    ), 
TCPH_BOVIN  (Q2NKZ1    ), TCPH_CHICK  (Q5ZJK8    ), TCPH_DICDI  (Q54ER7    ), 
TCPH_ENCCU  (Q8SR53    ), TCPH_HUMAN  (Q99832    ), TCPH_MOUSE  (P80313    ), 
TCPH_PLAF7  (O77323    ), TCPH_PONAB  (Q5R5C8    ), TCPH_SCHPO  (P87153    ), 
TCPH_TETPY  (P54409    ), TCPH_TETTH  (P54410    ), TCPH_YEAST  (P42943    ), 
TCPQ_BOVIN  (Q3ZCI9    ), TCPQ_CHICK  (Q6EE31    ), TCPQ_DICDI  (Q552J0    ), 
TCPQ_HUMAN  (P50990    ), TCPQ_MACFA  (Q4R5J0    ), TCPQ_MOUSE  (P42932    ), 
TCPQ_PONAB  (Q5RAP1    ), TCPQ_YEAST  (P47079    ), TCPW_BOVIN  (Q3T084    ), 
TCPW_HUMAN  (Q92526    ), TCPW_MOUSE  (Q61390    ), TCPZ_BOVIN  (Q3MHL7    ), 
TCPZ_CAEEL  (P46550    ), TCPZ_CHICK  (Q5ZJ54    ), TCPZ_DICDI  (Q76NU3    ), 
TCPZ_HUMAN  (P40227    ), TCPZ_MOUSE  (P80317    ), TCPZ_PIG    (Q29236    ), 
TCPZ_PONAB  (Q5RCD2    ), TCPZ_RABIT  (O77622    ), TCPZ_SCHPO  (O94515    ), 
TCPZ_YEAST  (P39079    ), THS1_HALVD  (O30561    ), THS2_HALVD  (O30560    ), 
THS3_HALVD  (Q9HHA2    ), THSA_AERPE  (Q9YDK6    ), THSA_ARCFU  (O28045    ), 
THSA_HALSA  (Q9HN70    ), THSA_METTH  (O26320    ), THSA_SULAC  (Q9V2T5    ), 
THSA_SULSH  (P46219    ), THSA_SULSO  (Q9V2S9    ), THSA_SULTO  (O24734    ), 
THSA_THEAC  (P48424    ), THSA_THEK1  (P61112    ), THSA_THEK8  (O24731    ), 
THSA_THEKO  (P61111    ), THSB_AERPE  (Q9YA66    ), THSB_ARCFU  (O28821    ), 
THSB_DESMO  (Q9V2T3    ), THSB_HALSA  (Q9HNI0    ), THSB_METTH  (O26885    ), 
THSB_SULAC  (Q9V2T4    ), THSB_SULSH  (P28488    ), THSB_SULSO  (Q9V2T8    ), 
THSB_SULTO  (O24735    ), THSB_THEAC  (P48425    ), THSB_THEK1  (O24730    ), 
THSB_THEK8  (O24732    ), THSB_THEKO  (Q52500    ), THS_DESSY   (Q53546    ), 
THS_METJA   (Q58405    ), THS_METKA   (P50016    ), THS_METTL   (O93624    ), 
THS_PYRAB   (Q9V2Q7    ), THS_PYRHO   (O57762    )
» more

UniProtKB/Swiss-Prot
False negative sequences
9 sequences

TCPG_THAWE  (Q9LKI7    ), TCPQL_HUMAN (A6NM43    ), TCPQM_HUMAN (Q96SF2    ), 
TCPQ_CAEBR  (A8X6I9    ), TCPQ_CAEEL  (Q9N358    ), TCPQ_CANAX  (P47828    ), 
TCPQ_SCHPO  (P78921    ), THSG_SULSH  (Q9HH21    ), THSG_SULSO  (Q9V2T7    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

TCPA_AMBME  (P50157    ), TCPA_MESAU  (P86208    )

		
UniProtKB/Swiss-Prot
False positive sequences
12 sequences

BGLL_ASPFC  (B0YB65    ), BGLL_ASPFU  (Q4WGT3    ), BGLL_NEOFI  (A1DCV5    ), 
MPE1_YEAST  (P35728    ), NAL14_HUMAN (Q86W24    ), PRA11_HUMAN (O60813    ), 
RLMKL_PSEF5 (Q4KFI6    ), RLMKL_PSEPF (Q3KFC5    ), SAT_CHLCH   (Q3AQ83    ), 
Y392_LISMO  (Q92EP8    ), Y404_LISMF  (Q723S2    ), Y410_LISIN  (Q7AP31    )
» more

PDB
[Detailed view]
16 PDB

1A6D; 1A6E; 1Q2V; 1Q3Q; 1Q3R; 1Q3S; 3IYG; 3KTT; 4A0O; 4A0V; 4A0W; 4A13; 4B2T; 4XCD; 4XCG; 4XCI
» more

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