Entry: PS00995

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General information about the entry

Entry name [info] TCP1_3
Accession [info] PS00995
Entry type [info] PATTERN
Date [info] JUN-1994 (CREATED); NOV-1995 (DATA UPDATE); JUN-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00610

Name and characterization of the entry

Description [info] Chaperonins TCP-1 signature 3.
Pattern [info]
Q-[DEK]-x-x-[LIVMGTA]-[GA]-D-G-T.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_07 which contains 546'000 sequence entries.


Total number of hits 150 in 150 different sequences
Number of true positive hits 138 in 138 different sequences
Number of 'unknown' hits
Number of false positive hits 12 in 12 different sequences
Number of false negative sequences 9
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 92.00 %
Recall (true positives / (true positives + false negatives)) 93.88 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
138 sequences

TCPA_ARATH  (P28769), TCPA_BOVIN  (Q32L40), TCPA_CAEEL  (P41988), 
TCPA_CRIGR  (P18279), TCPA_DICDI  (Q55BM4), TCPA_DROME  (P12613), 
TCPA_ENCCU  (Q8SSC9), TCPA_HUMAN  (P17987), TCPA_MACFA  (Q4R5G2), 
TCPA_MONDO  (Q9XT06), TCPA_MOUSE  (P11983), TCPA_PALPA  (Q9W790), 
TCPA_RAT    (P28480), TCPA_SCHMA  (Q94757), TCPA_SCHPO  (O94501), 
TCPA_TETPY  (O15891), TCPA_YEAST  (P12612), TCPB_BOVIN  (Q3ZBH0), 
TCPB_CAEEL  (P47207), TCPB_DICDI  (Q54ES9), TCPB_HUMAN  (P78371), 
TCPB_MACFA  (Q4R6F8), TCPB_MESAU  (P86245), TCPB_MOUSE  (P80314), 
TCPB_RAT    (Q5XIM9), TCPB_SCHPO  (Q10147), TCPB_YEAST  (P39076), 
TCPD_ASHGO  (Q75A36), TCPD_BOVIN  (Q2T9X2), TCPD_CAEEL  (P47208), 
TCPD_CANGA  (Q6FQT2), TCPD_DEBHA  (Q6BXF6), TCPD_DICDI  (Q54CL2), 
TCPD_HUMAN  (P50991), TCPD_KLULA  (Q6CL82), TCPD_MOUSE  (P80315), 
TCPD_OCHTR  (Q9NB32), TCPD_PONAB  (Q5R637), TCPD_RAT    (Q7TPB1), 
TCPD_SCHPO  (P50999), TCPD_TAKRU  (P53451), TCPD_YARLI  (Q6C100), 
TCPD_YEAST  (P39078), TCPE1_AVESA (P40412), TCPE2_AVESA (P54411), 
TCPE_ARATH  (O04450), TCPE_CAEEL  (P47209), TCPE_DICDI  (Q54TD3), 
TCPE_ENCCU  (Q8SRP9), TCPE_HUMAN  (P48643), TCPE_MACFA  (Q4R6V2), 
TCPE_MOUSE  (P80316), TCPE_PONAB  (Q5RF02), TCPE_RAT    (Q68FQ0), 
TCPE_SCHPO  (Q9UTM4), TCPE_YEAST  (P40413), TCPG_BOVIN  (Q3T0K2), 
TCPG_DICDI  (Q54TH8), TCPG_DROME  (P48605), TCPG_ENCCU  (Q8SR76), 
TCPG_HUMAN  (P49368), TCPG_MOUSE  (P80318), TCPG_OXYGR  (O00782), 
TCPG_PIG    (Q29068), TCPG_PONAB  (Q5NVF9), TCPG_RAT    (Q6P502), 
TCPG_SCHPO  (O74341), TCPG_TETPY  (P54408), TCPG_XENLA  (P50143), 
TCPG_YEAST  (P39077), TCPH_BOVIN  (Q2NKZ1), TCPH_CHICK  (Q5ZJK8), 
TCPH_DICDI  (Q54ER7), TCPH_ENCCU  (Q8SR53), TCPH_HUMAN  (Q99832), 
TCPH_MOUSE  (P80313), TCPH_PLAF7  (O77323), TCPH_PONAB  (Q5R5C8), 
TCPH_SCHPO  (P87153), TCPH_TETPY  (P54409), TCPH_TETTH  (P54410), 
TCPH_YEAST  (P42943), TCPQ_BOVIN  (Q3ZCI9), TCPQ_CHICK  (Q6EE31), 
TCPQ_DICDI  (Q552J0), TCPQ_HUMAN  (P50990), TCPQ_MACFA  (Q4R5J0), 
TCPQ_MOUSE  (P42932), TCPQ_PONAB  (Q5RAP1), TCPQ_YEAST  (P47079), 
TCPW_BOVIN  (Q3T084), TCPW_HUMAN  (Q92526), TCPW_MOUSE  (Q61390), 
TCPZ_BOVIN  (Q3MHL7), TCPZ_CAEEL  (P46550), TCPZ_CHICK  (Q5ZJ54), 
TCPZ_DICDI  (Q76NU3), TCPZ_HUMAN  (P40227), TCPZ_MOUSE  (P80317), 
TCPZ_PIG    (Q29236), TCPZ_PONAB  (Q5RCD2), TCPZ_RABIT  (O77622), 
TCPZ_SCHPO  (O94515), TCPZ_YEAST  (P39079), THS1_HALVD  (O30561), 
THS2_HALVD  (O30560), THS3_HALVD  (Q9HHA2), THSA_AERPE  (Q9YDK6), 
THSA_ARCFU  (O28045), THSA_HALSA  (Q9HN70), THSA_METTH  (O26320), 
THSA_SULAC  (Q9V2T5), THSA_SULSH  (P46219), THSA_SULSO  (Q9V2S9), 
THSA_SULTO  (O24734), THSA_THEAC  (P48424), THSA_THEK1  (P61112), 
THSA_THEK8  (O24731), THSA_THEKO  (P61111), THSB_AERPE  (Q9YA66), 
THSB_ARCFU  (O28821), THSB_DESMO  (Q9V2T3), THSB_HALSA  (Q9HNI0), 
THSB_METTH  (O26885), THSB_SULAC  (Q9V2T4), THSB_SULSH  (P28488), 
THSB_SULSO  (Q9V2T8), THSB_SULTO  (O24735), THSB_THEAC  (P48425), 
THSB_THEK1  (O24730), THSB_THEK8  (O24732), THSB_THEKO  (Q52500), 
THS_DESSY   (Q53546), THS_METJA   (Q58405), THS_METKA   (P50016), 
THS_METTL   (O93624), THS_PYRAB   (Q9V2Q7), THS_PYRHO   (O57762)
» More

UniProtKB/Swiss-Prot
False negative sequences
9 sequences

TCPG_THAWE  (Q9LKI7), TCPQL_HUMAN (A6NM43), TCPQM_HUMAN (Q96SF2), 
TCPQ_CAEBR  (A8X6I9), TCPQ_CAEEL  (Q9N358), TCPQ_CANAX  (P47828), 
TCPQ_SCHPO  (P78921), THSG_SULSH  (Q9HH21), THSG_SULSO  (Q9V2T7)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

TCPA_AMBME  (P50157), TCPA_MESAU  (P86208)

		
UniProtKB/Swiss-Prot
False positive sequences
12 sequences

BGLL_ASPFC  (B0YB65), BGLL_ASPFU  (Q4WGT3), BGLL_NEOFI  (A1DCV5), 
MPE1_YEAST  (P35728), NAL14_HUMAN (Q86W24), PRA11_HUMAN (O60813), 
RLMKL_PSEF5 (Q4KFI6), RLMKL_PSEPF (Q3KFC5), SAT_CHLCH   (Q3AQ83), 
Y392_LISMO  (Q92EP8), Y404_LISMF  (Q723S2), Y410_LISIN  (Q7AP31)
» More

PDB
[Detailed view]
19 PDB

1A6D; 1A6E; 1Q2V; 1Q3Q; 1Q3R; 1Q3S; 3IYG; 3KTT; 3P9D; 3P9E; 4A0O; 4A0V; 4A0W; 4A13; 4AOL; 4APK; 4B2T; 4D8Q; 4D8R
» More

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