Entry: PS01012

General information about the entry
Entry name FOLYLPOLYGLU_SYNT_2
Accession number PS01012
Entry type PATTERN
Date JUN-1994 (CREATED); DEC-2004 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00773
Name and characterization of the entry
DescriptionFolylpolyglutamate synthase signature 2.
Pattern [LIVMFY](2)-[EK]-x-G-[LIVM]-[GA]-G-x(2)-D-x-[GST]-x-[LIVM](2).
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 29 hits in 29 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 29 hits in 29 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 2
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 93.55 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
FOLC_BACSU  (Q05865), FOLC_BOVIN  (A6H751), FOLC_BUCAI  (P57265), 
FOLC_BUCAP  (Q8K9X3), FOLC_BUCBP  (Q89AT2), FOLC_CAEEL  (Q09509), 
FOLC_CRIGR  (Q924L9), FOLC_ECOLI  (P08192), FOLC_HAEIN  (P43775), 
FOLC_HUMAN  (Q05932), FOLC_LACCA  (P15925), FOLC_MOUSE  (P48760), 
FOLC_YEAST  (P36001), FOLD_YEAST  (Q12676), FOLE_CANAX  (Q9Y893), 
FOLE_NEUCR  (O13492), FOLE_SCHPO  (O74742), FOLE_YEAS1  (B3LJR0), 
FOLE_YEAS6  (B5VSC3), FOLE_YEAS7  (A6ZP80), FOLE_YEAS8  (C8ZGZ3), 
FOLE_YEASA  (E7KIA3), FOLE_YEASB  (E7Q9C7), FOLE_YEASL  (E7KUJ4), 
FOLE_YEASO  (E7NMM0), FOLE_YEAST  (Q08645), FOLE_YEASZ  (E7QKX4), 
FPGS2_ARATH (F4J2K2), FPGS3_ARATH (Q8W035)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
FOLC_DICDI  (Q54CY5), FPGS1_ARATH (F4K2A1)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1JBV; 1JBW; 1W78; 1W7K; 2GC5; 2GC6; 2GCA; 2GCB;

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