Entry: PS01013

General information about the entry
Entry name OSBP
Accession number PS01013
Entry type PATTERN
Date JUN-1994 (CREATED); APR-2006 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00774
Name and characterization of the entry
DescriptionOxysterol-binding protein family signature.
Pattern E-[KQ]-x-[SC]-H-[HR]-[PG]-[PL]-x(1,2)-[STACFI]-[ACGY].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 48 hits in 48 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 48 hits in 48 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 16
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 75.00 %
Comments
  • Taxonomic range: Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 2
Cross-references
UniProtKB/Swiss-Prot True positive hits:
HES1_YEAST  (P35843), KES1_SCHPO  (O74178), KES1_USTMA  (P0C199), 
KES1_YEAST  (P35844), OBPAL_CANAL (Q9UW21), OBPA_CANAL  (Q9UW25), 
ORP3A_ARATH (Q9LZM1), ORP3B_ARATH (Q9SR33), ORP3C_ARATH (Q93Y40), 
ORP4C_ARATH (Q9LVD4), OSB10_HUMAN (Q9BXB5), OSB11_DICDI (Q54ID7), 
OSB11_HUMAN (Q9BXB4), OSB11_MOUSE (Q8CI95), OSB12_DICDI (Q54EF5), 
OSB4_DICDI  (Q86KG4), OSB6_DICDI  (Q86HV4), OSBL1_HUMAN (Q9BXW6), 
OSBL1_MOUSE (Q91XL9), OSBL1_RAT   (Q8K4M9), OSBL2_HUMAN (Q9H1P3), 
OSBL2_MOUSE (Q8BX94), OSBL3_HUMAN (Q9H4L5), OSBL3_MOUSE (Q9DBS9), 
OSBL5_HUMAN (Q9H0X9), OSBL5_MOUSE (Q9ER64), OSBL6_HUMAN (Q9BZF3), 
OSBL6_MOUSE (Q8BXR9), OSBL7_HUMAN (Q9BZF2), OSBL8_HUMAN (Q9BZF1), 
OSBL9_HUMAN (Q96SU4), OSBL9_MOUSE (A2A8Z1), OSBL9_PONAB (Q5R9W4), 
OSBL9_XENTR (Q0IJ05), OSBP1_HUMAN (P22059), OSBP1_MOUSE (Q3B7Z2), 
OSBP1_RABIT (P16258), OSBP2_HUMAN (Q969R2), OSBP2_MOUSE (Q5QNQ6), 
OSH1_YEAST  (P35845), OSH2_YEAST  (Q12451), OSH3_YEAST  (P38713), 
OSH6_YEAST  (Q02201), OSH7_YEAST  (P38755), YB35_SCHPO  (O14340), 
YEH1_SCHPO  (O13944), YGV7_SCHPO  (O43021), YJX1_SCHPO  (Q9UUA1)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
ORP1A_ARATH (O80866), ORP1B_ARATH (Q8S8P9), ORP1C_ARATH (Q8L751), 
ORP1D_ARATH (Q9SAF0), ORP2A_ARATH (Q940Y1), ORP2B_ARATH (Q9SU36), 
ORP4A_ARATH (Q9SVZ9), ORP4B_ARATH (Q9SW00), OSB10_DICDI (Q54NM4), 
OSB1_DICDI  (Q8MPQ7), OSB2_DICDI  (Q55CR3), OSB3_DICDI  (Q55CR2), 
OSB5_DICDI  (Q86HL8), OSB7_DICDI  (Q54RM1), OSB8_DICDI  (Q54QP6), 
OSB9_DICDI  (Q54PS9)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1ZHT; 1ZHW; 1ZHX; 1ZHY; 1ZHZ; 1ZI7; 3SPW;

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