Entry: PS01014

General information about the entry

Entry name [info] NUSG
Accession [info] PS01014
Entry type [info] PATTERN
Date [info] JUN-1994 (CREATED); NOV-1997 (DATA UPDATE); JUN-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00775

Name and characterization of the entry

Description [info] Transcription termination factor nusG signature.
Pattern [info]
[LIVM]-F-G-[KRW]-x-T-P-[IV]-x-[LIVM].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_08 which contains 551'987 sequence entries.


Total number of hits 58 in 58 different sequences
Number of true positive hits 58 in 58 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 10
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 85.29 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
58 sequences

NUSG_AQUAE  (O67757    ), NUSG_BACHD  (Q9KGE7    ), NUSG_BACSU  (Q06795    ), 
NUSG_BORBU  (O51355    ), NUSG_BUCAI  (P57151    ), NUSG_BUCAP  (Q8KA65    ), 
NUSG_BUCBP  (Q89B15    ), NUSG_CAMJE  (Q9PI36    ), NUSG_DEIRA  (Q9RSS6    ), 
NUSG_ECO57  (P0AFG1    ), NUSG_ECOL6  (P0AA01    ), NUSG_ECOLI  (P0AFG0    ), 
NUSG_HAEIN  (P43916    ), NUSG_HELPJ  (Q9ZK20    ), NUSG_HELPY  (P55976    ), 
NUSG_LACLA  (Q9CDV7    ), NUSG_LIBAS  (P36262    ), NUSG_MYCBO  (P65590    ), 
NUSG_MYCLE  (Q9CBK0    ), NUSG_MYCTO  (P9WIU8    ), NUSG_MYCTU  (P9WIU9    ), 
NUSG_NEIMA  (P65591    ), NUSG_NEIMB  (P65592    ), NUSG_PASMU  (Q9CK84    ), 
NUSG_PSEAE  (Q9HWC4    ), NUSG_RICBR  (Q1RHC5    ), NUSG_RICCN  (Q92J91    ), 
NUSG_RICFE  (Q4UKC9    ), NUSG_RICPR  (P50056    ), NUSG_RICTY  (Q68XN3    ), 
NUSG_SALTI  (P0AA03    ), NUSG_SALTY  (P0AA02    ), NUSG_SHIFL  (P0AFG2    ), 
NUSG_STAA8  (Q2G0P2    ), NUSG_STAAC  (Q5HID9    ), NUSG_STAAE  (P0C1S3    ), 
NUSG_STAAM  (P0A095    ), NUSG_STAAN  (P0A096    ), NUSG_STAAR  (Q6GJD2    ), 
NUSG_STAAS  (Q6GBV1    ), NUSG_STAAW  (P0A097    ), NUSG_STACT  (P36264    ), 
NUSG_STAEQ  (Q5HRL6    ), NUSG_STAES  (Q8CQ85    ), NUSG_STRCO  (P36266    ), 
NUSG_STRGB  (P52852    ), NUSG_STRGR  (P36260    ), NUSG_STRVG  (P27309    ), 
NUSG_SYNY3  (P36265    ), NUSG_THEMA  (P29397    ), NUSG_THET8  (P35872    ), 
NUSG_TREPA  (O83264    ), NUSG_VIBCH  (Q9KV35    ), NUSG_VIBPA  (Q87KP9    ), 
NUSG_VIBVU  (Q8DD25    ), NUSG_XYLFA  (Q9PA81    ), NUSG_XYLFT  (Q87A27    ), 
NUSG_YERPE  (Q8ZAP0    )
» more

UniProtKB/Swiss-Prot
False negative sequences
10 sequences

NUSG_CHLMU  (Q9PK75    ), NUSG_CHLPN  (Q9Z9A5    ), NUSG_CHLTR  (O84322    ), 
NUSG_MYCGE  (P47300    ), NUSG_MYCPN  (P75049    ), NUSG_STRP1  (P68893    ), 
NUSG_STRP3  (P0DC78    ), NUSG_STRP6  (Q5XE43    ), NUSG_STRP8  (P68895    ), 
NUSG_STRPQ  (P0DC79    )
» more

PDB
[Detailed view]
9 PDB

1M1G; 1NPP; 1NPR; 1NZ9; 2JVV; 2KVQ; 2LQ8; 2MI6; 2XHC

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