Entry: PS01014

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General information about the entry

Entry name [info] NUSG
Accession [info] PS01014
Entry type [info] PATTERN
Date [info] JUN-1994 (CREATED); NOV-1997 (DATA UPDATE); JUL-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00775

Name and characterization of the entry

Description [info] Transcription termination factor nusG signature.
Pattern [info]
[LIVM]-F-G-[KRW]-x-T-P-[IV]-x-[LIVM].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_09 which contains 546'439 sequence entries.


Total number of hits 58 in 58 different sequences
Number of true positive hits 58 in 58 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 10
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 85.29 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
58 sequences

NUSG_AQUAE  (O67757), NUSG_BACHD  (Q9KGE7), NUSG_BACSU  (Q06795), 
NUSG_BORBU  (O51355), NUSG_BUCAI  (P57151), NUSG_BUCAP  (Q8KA65), 
NUSG_BUCBP  (Q89B15), NUSG_CAMJE  (Q9PI36), NUSG_DEIRA  (Q9RSS6), 
NUSG_ECO57  (P0AFG1), NUSG_ECOL6  (P0AA01), NUSG_ECOLI  (P0AFG0), 
NUSG_HAEIN  (P43916), NUSG_HELPJ  (Q9ZK20), NUSG_HELPY  (P55976), 
NUSG_LACLA  (Q9CDV7), NUSG_LIBAS  (P36262), NUSG_MYCBO  (P65590), 
NUSG_MYCLE  (Q9CBK0), NUSG_MYCTO  (P9WIU8), NUSG_MYCTU  (P9WIU9), 
NUSG_NEIMA  (P65591), NUSG_NEIMB  (P65592), NUSG_PASMU  (Q9CK84), 
NUSG_PSEAE  (Q9HWC4), NUSG_RICBR  (Q1RHC5), NUSG_RICCN  (Q92J91), 
NUSG_RICFE  (Q4UKC9), NUSG_RICPR  (P50056), NUSG_RICTY  (Q68XN3), 
NUSG_SALTI  (P0AA03), NUSG_SALTY  (P0AA02), NUSG_SHIFL  (P0AFG2), 
NUSG_STAA8  (Q2G0P2), NUSG_STAAC  (Q5HID9), NUSG_STAAE  (P0C1S3), 
NUSG_STAAM  (P0A095), NUSG_STAAN  (P0A096), NUSG_STAAR  (Q6GJD2), 
NUSG_STAAS  (Q6GBV1), NUSG_STAAW  (P0A097), NUSG_STACT  (P36264), 
NUSG_STAEQ  (Q5HRL6), NUSG_STAES  (Q8CQ85), NUSG_STRCO  (P36266), 
NUSG_STRGB  (P52852), NUSG_STRGR  (P36260), NUSG_STRVG  (P27309), 
NUSG_SYNY3  (P36265), NUSG_THEMA  (P29397), NUSG_THET8  (P35872), 
NUSG_TREPA  (O83264), NUSG_VIBCH  (Q9KV35), NUSG_VIBPA  (Q87KP9), 
NUSG_VIBVU  (Q8DD25), NUSG_XYLFA  (Q9PA81), NUSG_XYLFT  (Q87A27), 
NUSG_YERPE  (Q8ZAP0)
» More

UniProtKB/Swiss-Prot
False negative sequences
10 sequences

NUSG_CHLMU  (Q9PK75), NUSG_CHLPN  (Q9Z9A5), NUSG_CHLTR  (O84322), 
NUSG_MYCGE  (P47300), NUSG_MYCPN  (P75049), NUSG_STRP1  (P68893), 
NUSG_STRP3  (P0DC78), NUSG_STRP6  (Q5XE43), NUSG_STRP8  (P68895), 
NUSG_STRPQ  (P0DC79)
» More

PDB
[Detailed view]
9 PDB

1M1G; 1NPP; 1NPR; 1NZ9; 2JVV; 2KVQ; 2LQ8; 2MI6; 2XHC

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