Entry: PS01042

General information about the entry
Entry name HOMOSER_DHGENASE
Accession number PS01042
Entry type PATTERN
Date NOV-1995 (CREATED); JUL-1998 (DATA UPDATE); APR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00800
Name and characterization of the entry
DescriptionHomoserine dehydrogenase signature.
Pattern A-x(3)-G-[LIVMFY]-[STAG]-x(2,3)-[DNS]-P-x(2)-D-[LIVM]-x-G-x-D-x(3)-K.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_06, total number of sequence entries in that release: 540261.
  • Total number of hits in UniProtKB/Swiss-Prot: 28 hits in 28 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 28 hits in 28 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 1
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 96.55 %
Comments
  • Taxonomic range: Archaea, Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
AK1H_ECOLI  (P00561), AK1H_SERMA  (P27725), AK2H_ECOLI  (P00562), 
AKH1_ARATH  (Q9SA18), AKH1_MAIZE  (P49079), AKH2_ARATH  (O81852), 
AKH2_MAIZE  (P49080), AKH_BUCAI   (P57290), AKH_BUCAP   (Q8K9U9), 
AKH_BUCBP   (Q89AR4), AKH_DAUCA   (P37142), AKH_HAEIN   (P44505), 
DHOM_BACSU  (P19582), DHOM_CORGL  (P08499), DHOM_EMENI  (Q5B998), 
DHOM_HELPJ  (Q9ZL20), DHOM_HELPY  (P56429), DHOM_LACLA  (Q9CGD8), 
DHOM_LACLC  (P52985), DHOM_METJA  (Q58997), DHOM_MYCBO  (P63630), 
DHOM_MYCLE  (P46806), DHOM_MYCTU  (P63629), DHOM_PSEAE  (P29365), 
DHOM_SCHPO  (O94671), DHOM_SYNY3  (P52986), DHOM_YEAST  (P31116), 
DHON_METGL  (P37144)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
DHOM_METGL  (P37143)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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PDB
[Detailed view]		 1EBF; 1EBU; 1Q7G; 1TVE;

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