Entry: PS01049

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General information about the entry

Entry name [info] YJEF_C_1
Accession [info] PS01049
Entry type [info] PATTERN
Date [info] NOV-1995 (CREATED); NOV-1997 (DATA UPDATE); MAR-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00806

Name and characterization of the entry

Description [info] YjeF C-terminal domain signature 1.
Pattern [info]
[SAV]-[IVW]-[LVA]-[LIV]-G-[PNS]-G-L-[GP]-x-[DENQT].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_04 which contains 544'996 sequence entries.


Total number of hits 24 in 24 different sequences
Number of true positive hits 24 in 24 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 67
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 26.37 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
24 sequences

NNRD_BACSU  (P94368), NNRD_CAEBR  (A8X354), NNRD_CAEEL  (P32740), 
NNRD_DANRE  (F1Q575), NNRD_DROME  (Q9VVW8), NNRD_DROPS  (B5DHB2), 
NNRD_ENTFA  (Q833Y3), NNRD_IXOSC  (B7PBI5), NNRD_LACLA  (Q9CIU7), 
NNRD_LACPL  (F9UN92), NNRD_PHANO  (Q0UVK8), NNRD_SCHPO  (O94347), 
NNRD_STAA8  (Q2G2P8), NNRD_STRR6  (Q8DQD2), NNRD_STRTR  (P96051), 
NNRD_USTMA  (Q4P219), NNRD_YEAST  (P36059), NNR_ECOLI   (P31806), 
NNR_METJA   (Q58981), NNR_MYCLE   (P37391), NNR_MYCTO   (P9WF10), 
NNR_MYCTU   (P9WF11), NNR_SYNY3   (P74217), NNR_THEMA   (Q9X024)
» More

UniProtKB/Swiss-Prot
False negative sequences
67 sequences

NNRD1_PUCGT (E3LAQ9), NNRD2_PUCGT (E3L9T1), NNRD_AEDAE  (Q17NP0), 
NNRD_AJECG  (C0NFV9), NNRD_ANODA  (E3XDZ8), NNRD_ARATH  (Q94AF2), 
NNRD_ASPFU  (Q4X1F8), NNRD_BATDJ  (F4NZ38), NNRD_BORPE  (Q7VU32), 
NNRD_BOVIN  (E1BNQ4), NNRD_CANAL  (Q59M69), NNRD_CANAW  (C4YSU5), 
NNRD_CANFA  (E2QUI9), NNRD_CENSY  (A0RU82), NNRD_CIOIN  (F6RCC2), 
NNRD_COPC7  (A8N8Z0), NNRD_CRYNJ  (Q5K8L4), NNRD_DICDI  (Q54FJ9), 
NNRD_EMENI  (Q5B0D6), NNRD_ENTHI  (C4LZV8), NNRD_FLAPJ  (A6GXW4), 
NNRD_HALTV  (D2RXF6), NNRD_HUMAN  (Q8IW45), NNRD_LISMO  (Q8Y6R2), 
NNRD_MACMU  (F7E727), NNRD_MOUSE  (Q9CZ42), NNRD_NATMM  (D3SQW0), 
NNRD_NECH7  (C7YKN8), NNRD_NEIG1  (Q5F8G9), NNRD_NEIMB  (Q9JRZ9), 
NNRD_NEMVE  (A7RRZ8), NNRD_NEUCR  (Q7SHU9), NNRD_NITMS  (A9A498), 
NNRD_PEDHC  (E0VSF4), NNRD_PHATC  (B7FXE8), NNRD_PHYPA  (A9RY03), 
NNRD_POLPA  (D3BMU4), NNRD_PONAB  (Q5R824), NNRD_RAT    (D4AAT7), 
NNRD_RHOBA  (Q7UFW7), NNRD_SORBI  (C5Y210), NNRD_VITVI  (F6HDM2), 
NNRD_XANCP  (Q8PBP3), NNR_AQUAE   (O67377), NNR_ARCFU   (O29407), 
NNR_CORGL   (Q8NSS3), NNR_COXBU   (Q83CM5), NNR_DICTD   (B8E2P6), 
NNR_GLOVI   (Q7NIE6), NNR_HELPJ   (Q9ZJM4), NNR_HELPY   (P56176), 
NNR_HYPBU   (A2BLC0), NNR_KORCO   (B1L3W1), NNR_LEIBR   (A4H7T9), 
NNR_LEIIN   (A4HW65), NNR_LEIMA   (Q4QFL5), NNR_METHJ   (Q2FT57), 
NNR_METKA   (Q8TX67), NNR_METTH   (O27324), NNR_MOOTA   (Q2RGI2), 
NNR_PYRAE   (Q8ZV04), NNR_SALRD   (Q2S580), NNR_THEAS   (D1BAA5), 
NNR_THEEB   (Q8DGC3), NNR_THEPD   (A1S0R2), NNR_THEYD   (B5YIM0), 
NNR_VIBCH   (Q9KMX5)
» More

PDB
[Detailed view]
33 PDB

1KYH; 2AX3; 2R3B; 2R3E; 3RPH; 3RPZ; 3RQ2; 3RQ5; 3RQ6; 3RQ8; 3RQH; 3RQQ; 3RQX; 3RRB; 3RRE; 3RRF; 3RRJ; 3RS8; 3RS9; 3RSF; 3RSG; 3RSQ; 3RSS; 3RT7; 3RT9; 3RTA; 3RTB; 3RTC; 3RTD; 3RTE; 3RTG; 3RU2; 3RU3
» More

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