Entry: PS01049

General information about the entry

Entry name [info] YJEF_C_1
Accession [info] PS01049
Entry type [info] PATTERN
Date [info] NOV-1995 (CREATED); NOV-1997 (DATA UPDATE); MAY-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00806

Name and characterization of the entry

Description [info] YjeF C-terminal domain signature 1.
Pattern [info]
[SAV]-[IVW]-[LVA]-[LIV]-G-[PNS]-G-L-[GP]-x-[DENQT].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_07 which contains 548'872 sequence entries.


Total number of hits 24 in 24 different sequences
Number of true positive hits 24 in 24 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 67
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 26.37 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
24 sequences

NNRD_BACSU  (P94368), NNRD_CAEBR  (A8X354), NNRD_CAEEL  (P32740), 
NNRD_DANRE  (F1Q575), NNRD_DROME  (Q9VVW8), NNRD_DROPS  (B5DHB2), 
NNRD_ENTFA  (Q833Y3), NNRD_IXOSC  (B7PBI5), NNRD_LACLA  (Q9CIU7), 
NNRD_LACPL  (F9UN92), NNRD_PHANO  (Q0UVK8), NNRD_SCHPO  (O94347), 
NNRD_STAA8  (Q2G2P8), NNRD_STRR6  (Q8DQD2), NNRD_STRTR  (P96051), 
NNRD_USTMA  (Q4P219), NNRD_YEAST  (P36059), NNR_ECOLI   (P31806), 
NNR_METJA   (Q58981), NNR_MYCLE   (P37391), NNR_MYCTO   (P9WF10), 
NNR_MYCTU   (P9WF11), NNR_SYNY3   (P74217), NNR_THEMA   (Q9X024)
» More

UniProtKB/Swiss-Prot
False negative sequences
67 sequences

NNRD1_PUCGT (E3LAQ9), NNRD2_PUCGT (E3L9T1), NNRD_AEDAE  (Q17NP0), 
NNRD_AJECG  (C0NFV9), NNRD_ANODA  (E3XDZ8), NNRD_ARATH  (Q94AF2), 
NNRD_ASPFU  (Q4X1F8), NNRD_BATDJ  (F4NZ38), NNRD_BORPE  (Q7VU32), 
NNRD_BOVIN  (E1BNQ4), NNRD_CANAL  (Q59M69), NNRD_CANAW  (C4YSU5), 
NNRD_CANFA  (E2QUI9), NNRD_CENSY  (A0RU82), NNRD_CIOIN  (F6RCC2), 
NNRD_COPC7  (A8N8Z0), NNRD_CRYNJ  (Q5K8L4), NNRD_DICDI  (Q54FJ9), 
NNRD_EMENI  (Q5B0D6), NNRD_ENTHI  (C4LZV8), NNRD_FLAPJ  (A6GXW4), 
NNRD_HALTV  (D2RXF6), NNRD_HUMAN  (Q8IW45), NNRD_LISMO  (Q8Y6R2), 
NNRD_MACMU  (F7E727), NNRD_MOUSE  (Q9CZ42), NNRD_NATMM  (D3SQW0), 
NNRD_NECH7  (C7YKN8), NNRD_NEIG1  (Q5F8G9), NNRD_NEIMB  (Q9JRZ9), 
NNRD_NEMVE  (A7RRZ8), NNRD_NEUCR  (Q7SHU9), NNRD_NITMS  (A9A498), 
NNRD_PEDHC  (E0VSF4), NNRD_PHATC  (B7FXE8), NNRD_PHYPA  (A9RY03), 
NNRD_POLPA  (D3BMU4), NNRD_PONAB  (Q5R824), NNRD_RAT    (D4AAT7), 
NNRD_RHOBA  (Q7UFW7), NNRD_SORBI  (C5Y210), NNRD_VITVI  (F6HDM2), 
NNRD_XANCP  (Q8PBP3), NNR_AQUAE   (O67377), NNR_ARCFU   (O29407), 
NNR_CORGL   (Q8NSS3), NNR_COXBU   (Q83CM5), NNR_DICTD   (B8E2P6), 
NNR_GLOVI   (Q7NIE6), NNR_HELPJ   (Q9ZJM4), NNR_HELPY   (P56176), 
NNR_HYPBU   (A2BLC0), NNR_KORCO   (B1L3W1), NNR_LEIBR   (A4H7T9), 
NNR_LEIIN   (A4HW65), NNR_LEIMA   (Q4QFL5), NNR_METHJ   (Q2FT57), 
NNR_METKA   (Q8TX67), NNR_METTH   (O27324), NNR_MOOTA   (Q2RGI2), 
NNR_PYRAE   (Q8ZV04), NNR_SALRD   (Q2S580), NNR_THEAS   (D1BAA5), 
NNR_THEEB   (Q8DGC3), NNR_THEPD   (A1S0R2), NNR_THEYD   (B5YIM0), 
NNR_VIBCH   (Q9KMX5)
» More

PDB
[Detailed view]
33 PDB

1KYH; 2AX3; 2R3B; 2R3E; 3RPH; 3RPZ; 3RQ2; 3RQ5; 3RQ6; 3RQ8; 3RQH; 3RQQ; 3RQX; 3RRB; 3RRE; 3RRF; 3RRJ; 3RS8; 3RS9; 3RSF; 3RSG; 3RSQ; 3RSS; 3RT7; 3RT9; 3RTA; 3RTB; 3RTC; 3RTD; 3RTE; 3RTG; 3RU2; 3RU3
» More

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission