Entry: PS01067

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General information about the entry

Entry name [info] SECE_SEC61G
Accession [info] PS01067
Entry type [info] PATTERN
Date [info] NOV-1995 (CREATED); APR-2006 (DATA UPDATE); JUN-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00818

Name and characterization of the entry

Description [info] Protein secE/sec61-gamma signature.
Pattern [info]
[LIVMFY]-x-{D}-[DENQGA]-x-{E}-x(2)-[LIVMFTA]-x-[KRV]-x(2)-[KW]-P-x(3)-
[SEQ]-x(5)-{D}-{CG}-[LIVT]-[LIVGA]-[LIVFGAST].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_07 which contains 546'000 sequence entries.


Total number of hits 81 in 81 different sequences
Number of true positive hits 73 in 73 different sequences
Number of 'unknown' hits
Number of false positive hits 8 in 8 different sequences
Number of false negative sequences 29
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 90.12 %
Recall (true positives / (true positives + false negatives)) 71.57 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
73 sequences

S61G1_ARATH (P0DI74), S61G1_DROME (Q9V668), S61G1_GRYOR (Q7Z1B8), 
S61G2_ARATH (P0DI75), S61G2_DROME (Q9VWE9), SC61G_BOVIN (Q3T104), 
SC61G_BRABE (Q962X7), SC61G_CAEEL (Q19967), SC61G_CANFA (P60058), 
SC61G_CIOIN (Q8I7D9), SC61G_DICDI (Q54JV6), SC61G_GADMO (Q7SZU9), 
SC61G_HARAN (Q7T207), SC61G_HUMAN (P60059), SC61G_MOUSE (P60060), 
SC61G_NEUCR (Q9C2D4), SC61G_ORYSJ (P38385), SC61G_SCHPO (Q09827), 
SC61G_XENLA (Q66KU2), SC61G_YEAST (P35179), SECE_BACHD  (Q9KGE8), 
SECE_BACLI  (P38381), SECE_BACSU  (Q06799), SECE_BUCAP  (Q8KA64), 
SECE_ECO57  (P0AG98), SECE_ECOL6  (P0AG97), SECE_ECOLI  (P0AG96), 
SECE_HAEIN  (P43805), SECE_METTH  (O27713), SECE_MYCBO  (P0A5Z1), 
SECE_MYCLE  (Q9CBJ9), SECE_MYCTO  (P9WGN6), SECE_MYCTU  (P9WGN7), 
SECE_PSEAE  (Q9HWC3), SECE_PYRAB  (Q9V2S1), SECE_PYRHO  (P58199), 
SECE_RICBE  (Q8KTA9), SECE_RICBR  (Q1RHC4), SECE_RICCN  (Q92J92), 
SECE_RICFE  (Q4UKC8), SECE_RICMO  (Q8KTB5), SECE_RICPA  (Q7WWR6), 
SECE_RICPR  (P50054), SECE_RICRH  (Q8KHU8), SECE_RICRI  (Q8KTC0), 
SECE_RICSI  (Q7B6T4), SECE_RICTY  (Q68XN4), SECE_SALTI  (P0A2D4), 
SECE_SALTY  (P0A2D3), SECE_STAA8  (P0A0I4), SECE_STAAC  (Q5HIE0), 
SECE_STAAM  (P0A0I1), SECE_STAAN  (P0A0I2), SECE_STAAR  (Q6GJD3), 
SECE_STAAS  (Q6GBV2), SECE_STAAW  (P0A0I3), SECE_STACT  (P36253), 
SECE_STAEQ  (Q5HRL7), SECE_STAES  (Q8CQ86), SECE_STRCO  (P0A4G8), 
SECE_STRGB  (P52853), SECE_STRGR  (P36690), SECE_STRLI  (P0A4G9), 
SECE_STRVG  (P36691), SECE_SULAC  (P27340), SECE_SYNY3  (P38382), 
SECE_THEKO  (Q5JH32), SECE_THEMA  (P35874), SECE_THEON  (B6YSX5), 
SECE_THET8  (P38383), SECE_TREPA  (O83263), SECE_VIBAL  (Q9ZNE7), 
SECE_VIBCH  (Q9KV36)
» More

UniProtKB/Swiss-Prot
False negative sequences
29 sequences

S61G3_ARATH (Q9SMP2), SC61G_ENCCU (Q8SRW9), SECE_ACIAM  (Q46493), 
SECE_AERPE  (P58198), SECE_AQUAE  (D0VWU4), SECE_ARCFU  (O29714), 
SECE_BORBU  (O51356), SECE_BUCAI  (P57152), SECE_BUCBP  (Q89B14), 
SECE_HALLT  (B9LV21), SECE_HALMA  (Q5V456), SECE_HALMT  (Q9V2S5), 
SECE_HALS3  (B0R382), SECE_HALSA  (Q9HS72), SECE_HALWD  (Q18KS3), 
SECE_METAC  (Q8TI84), SECE_METBF  (Q46EU5), SECE_METBU  (Q12UQ2), 
SECE_METJA  (Q57817), SECE_METKA  (Q8TX54), SECE_METMA  (Q8PY55), 
SECE_METMP  (Q6LXB7), SECE_METS3  (A5UKV2), SECE_METS5  (A4YH85), 
SECE_METST  (Q2NEV8), SECE_NATPD  (Q3ITN6), SECE_PYRFU  (Q8TZK2), 
SECE_SULSO  (P58191), SECE_SULTO  (Q971I8)
» More

UniProtKB/Swiss-Prot
False positive sequences
8 sequences

ALEX_HUMAN  (P84996), CRCB2_BACLD (Q65LX3), DBP3_ASHGO  (Q755A5), 
GLNE_MANSM  (Q65T25), LLPB_MACEU  (Q8SQ30), MMR1_YEAST  (Q06324), 
PSP24_XENLA (P79945), RLMM_CHRSD  (Q1QUU9)
» More

PDB
[Detailed view]
9 PDB

2AKH; 2AKI; 2WW9; 2WWA; 2WWB; 3J01; 4CG5; 4CG6; 4CG7

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