Entry: PS01067

General information about the entry

Entry name [info] SECE_SEC61G
Accession [info] PS01067
Entry type [info] PATTERN
Date [info] NOV-1995 (CREATED); APR-2006 (DATA UPDATE); JUN-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00818

Name and characterization of the entry

Description [info] Protein secE/sec61-gamma signature.
Pattern [info]
[LIVMFY]-x-{D}-[DENQGA]-x-{E}-x(2)-[LIVMFTA]-x-[KRV]-x(2)-[KW]-P-x(3)-
[SEQ]-x(5)-{D}-{CG}-[LIVT]-[LIVGA]-[LIVFGAST].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_08 which contains 320'201 sequence entries.


Total number of hits 81 in 81 different sequences
Number of true positive hits 73 in 73 different sequences
Number of 'unknown' hits 0
Number of false positive hits 8 in 8 different sequences
Number of false negative sequences 29
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 90.12 %
Recall (true positives / (true positives + false negatives)) 71.57 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
73 sequences

S61G1_ARATH (P0DI74), S61G1_DROME (Q9V668), S61G1_GRYOR (Q7Z1B8), 
S61G2_ARATH (P0DI75), S61G2_DROME (Q9VWE9), SC61G_BOVIN (Q3T104), 
SC61G_BRABE (Q962X7), SC61G_CAEEL (Q19967), SC61G_CANFA (P60058), 
SC61G_CIOIN (Q8I7D9), SC61G_DICDI (Q54JV6), SC61G_GADMO (Q7SZU9), 
SC61G_HARAN (Q7T207), SC61G_HUMAN (P60059), SC61G_MOUSE (P60060), 
SC61G_NEUCR (Q9C2D4), SC61G_ORYSJ (P38385), SC61G_SCHPO (Q09827), 
SC61G_XENLA (Q66KU2), SC61G_YEAST (P35179), SECE_BACHD  (Q9KGE8), 
SECE_BACLI  (P38381), SECE_BACSU  (Q06799), SECE_BUCAP  (Q8KA64), 
SECE_ECO57  (P0AG98), SECE_ECOL6  (P0AG97), SECE_ECOLI  (P0AG96), 
SECE_HAEIN  (P43805), SECE_METTH  (O27713), SECE_MYCBO  (P0A5Z1), 
SECE_MYCLE  (Q9CBJ9), SECE_MYCTO  (P9WGN6), SECE_MYCTU  (P9WGN7), 
SECE_PSEAE  (Q9HWC3), SECE_PYRAB  (Q9V2S1), SECE_PYRHO  (P58199), 
SECE_RICBE  (Q8KTA9), SECE_RICBR  (Q1RHC4), SECE_RICCN  (Q92J92), 
SECE_RICFE  (Q4UKC8), SECE_RICMO  (Q8KTB5), SECE_RICPA  (Q7WWR6), 
SECE_RICPR  (P50054), SECE_RICRH  (Q8KHU8), SECE_RICRI  (Q8KTC0), 
SECE_RICSI  (Q7B6T4), SECE_RICTY  (Q68XN4), SECE_SALTI  (P0A2D4), 
SECE_SALTY  (P0A2D3), SECE_STAA8  (P0A0I4), SECE_STAAC  (Q5HIE0), 
SECE_STAAM  (P0A0I1), SECE_STAAN  (P0A0I2), SECE_STAAR  (Q6GJD3), 
SECE_STAAS  (Q6GBV2), SECE_STAAW  (P0A0I3), SECE_STACT  (P36253), 
SECE_STAEQ  (Q5HRL7), SECE_STAES  (Q8CQ86), SECE_STRCO  (P0A4G8), 
SECE_STRGB  (P52853), SECE_STRGR  (P36690), SECE_STRLI  (P0A4G9), 
SECE_STRVG  (P36691), SECE_SULAC  (P27340), SECE_SYNY3  (P38382), 
SECE_THEKO  (Q5JH32), SECE_THEMA  (P35874), SECE_THEON  (B6YSX5), 
SECE_THET8  (P38383), SECE_TREPA  (O83263), SECE_VIBAL  (Q9ZNE7), 
SECE_VIBCH  (Q9KV36)
» More

UniProtKB/Swiss-Prot
False negative sequences
29 sequences

S61G3_ARATH (Q9SMP2), SC61G_ENCCU (Q8SRW9), SECE_ACIAM  (Q46493), 
SECE_AERPE  (P58198), SECE_AQUAE  (D0VWU4), SECE_ARCFU  (O29714), 
SECE_BORBU  (O51356), SECE_BUCAI  (P57152), SECE_BUCBP  (Q89B14), 
SECE_HALLT  (B9LV21), SECE_HALMA  (Q5V456), SECE_HALMT  (Q9V2S5), 
SECE_HALS3  (B0R382), SECE_HALSA  (Q9HS72), SECE_HALWD  (Q18KS3), 
SECE_METAC  (Q8TI84), SECE_METBF  (Q46EU5), SECE_METBU  (Q12UQ2), 
SECE_METJA  (Q57817), SECE_METKA  (Q8TX54), SECE_METMA  (Q8PY55), 
SECE_METMP  (Q6LXB7), SECE_METS3  (A5UKV2), SECE_METS5  (A4YH85), 
SECE_METST  (Q2NEV8), SECE_NATPD  (Q3ITN6), SECE_PYRFU  (Q8TZK2), 
SECE_SULSO  (P58191), SECE_SULTO  (Q971I8)
» More

UniProtKB/Swiss-Prot
False positive sequences
8 sequences

ALEX_HUMAN  (P84996), CRCB2_BACLD (Q65LX3), DBP3_ASHGO  (Q755A5), 
GLNE_MANSM  (Q65T25), LLPB_MACEU  (Q8SQ30), MMR1_YEAST  (Q06324), 
PSP24_XENLA (P79945), RLMM_CHRSD  (Q1QUU9)
» More

PDB
[Detailed view]
8 PDB

2AKH; 2AKI; 2WW9; 2WWA; 2WWB; 4CG5; 4CG6; 4CG7

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